RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SLC1A4P43007 532 aa14.5□□□□□ -0.09
MSH5-216ENST00000484309 CCDC96Q2M329 555 aa14.5□□□□□ -0.09
MSH5-216ENST00000484309 MAP3K21Q5TCX8 1036 aa14.5□□□□□ -0.09
MSH5-216ENST00000484309 SNRNP48Q6IEG0 339 aaKnown RBP14.5□□□□□ -0.09
MSH5-216ENST00000484309 RIOX2Q8IUF8 465 aa14.5□□□□□ -0.09
MSH5-216ENST00000484309 TRMT44Q8IYL2 757 aaKnown RBP14.5□□□□□ -0.09
MSH5-216ENST00000484309 PRPF38AQ8NAV1 312 aaKnown RBP14.5□□□□□ -0.09
MSH5-216ENST00000484309 RAVER2Q9HCJ3 691 aaKnown RBP14.5□□□□□ -0.09
MSH5-216ENST00000484309 FEM1BQ9UK73 627 aa14.5□□□□□ -0.09
MSH5-216ENST00000484309 SYNPO2Q9UMS6 1093 aa14.5□□□□□ -0.09
MSH5-216ENST00000484309 RAD50Q92878 1312 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 STRNO43815 780 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 ZBED4O75132 1171 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 SLC25A27O95847 323 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 PGK2P07205 417 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 HOXC6P09630 235 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 FCER1AP12319 257 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 CYP2C19P33261 490 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 SNAP25P60880 206 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 PPP4R3BQ5MIZ7 849 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 MMP19Q99542 508 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 TMEM47Q9BQJ4 181 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 RNF41Q9H4P4 317 aaPredicted RBP14.49□□□□□ -0.09
MSH5-216ENST00000484309 RIPK3Q9Y572 518 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 LCTP09848 1927 aa14.49□□□□□ -0.09
MSH5-216ENST00000484309 FRMPD2Q68DX3 1309 aaPredicted RBP14.48□□□□□ -0.09
MSH5-216ENST00000484309 B4E1Z4 1266 aa14.48□□□□□ -0.09
MSH5-216ENST00000484309 KDM4AO75164 1064 aa14.48□□□□□ -0.09
MSH5-216ENST00000484309 STAT2P52630 851 aa14.48□□□□□ -0.09
MSH5-216ENST00000484309 PTH1RQ03431 593 aa14.48□□□□□ -0.09
MSH5-216ENST00000484309 IMMTQ16891 758 aaKnown RBP14.48□□□□□ -0.09
MSH5-216ENST00000484309 MFSD14CQ5VZR4 134 aa14.48□□□□□ -0.09
MSH5-216ENST00000484309 CENPQQ7L2Z9 268 aaPredicted RBP14.48□□□□□ -0.09
MSH5-216ENST00000484309 DIS3LQ8TF46 1054 aaKnown RBP14.48□□□□□ -0.09
MSH5-216ENST00000484309 RUFY2Q8WXA3 655 aa14.48□□□□□ -0.09
MSH5-216ENST00000484309 ESR2Q92731 530 aa14.48□□□□□ -0.09
MSH5-216ENST00000484309 GMCL1Q96IK5 515 aa14.48□□□□□ -0.09
MSH5-216ENST00000484309 TEX13BQ9BXU2 312 aa14.48□□□□□ -0.09
MSH5-216ENST00000484309 SLC38A10Q9HBR0 1119 aa14.48□□□□□ -0.09
MSH5-216ENST00000484309 MKI67P46013 3256 aaKnown RBP14.48□□□□□ -0.09
MSH5-216ENST00000484309 TOP1P11387 765 aaKnown RBP14.47□□□□□ -0.09
MSH5-216ENST00000484309 TAL1P17542 331 aaPredicted RBP14.47□□□□□ -0.09
MSH5-216ENST00000484309 CNGA1P29973 690 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 NOVP48745 357 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 KCTD2Q14681 263 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 TTBK2Q6IQ55 1244 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 RCSD1Q6JBY9 416 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 CCDC174Q6PII3 467 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 TRPV1Q8NER1 839 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 CRISPLD2Q9H0B8 497 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 GPCPD1Q9NPB8 672 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 HOMER2Q9NSB8 354 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 TCP11L1Q9NUJ3 509 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 CTNNA3Q9UI47 895 aa14.47□□□□□ -0.09
MSH5-216ENST00000484309 PCP11498 1178 aaKnown RBP14.46□□□□□ -0.09
MSH5-216ENST00000484309 COPB2P35606 906 aa14.46□□□□□ -0.09
MSH5-216ENST00000484309 SLC16A2P36021 539 aa14.46□□□□□ -0.09
MSH5-216ENST00000484309 PRPF38BQ5VTL8 546 aaKnown RBP14.46□□□□□ -0.09
MSH5-216ENST00000484309 UBE2Q1Q7Z7E8 422 aa14.46□□□□□ -0.09
MSH5-216ENST00000484309 FAM160B2Q86V87 743 aa14.46□□□□□ -0.09
MSH5-216ENST00000484309 ABRAQ8N0Z2 381 aa14.46□□□□□ -0.09
MSH5-216ENST00000484309 CHURC1Q8WUH1 139 aa14.46□□□□□ -0.09
MSH5-216ENST00000484309 DCAF4Q8WV16 495 aa14.46□□□□□ -0.09
MSH5-216ENST00000484309 PAWRQ96IZ0 340 aaKnown RBP14.46□□□□□ -0.09
MSH5-216ENST00000484309 MAML3Q96JK9 1138 aa14.46□□□□□ -0.09
MSH5-216ENST00000484309 PRR12Q9ULL5 1215 aa14.46□□□□□ -0.09
MSH5-216ENST00000484309 SGSM2O43147 1006 aa14.45□□□□□ -0.1
MSH5-216ENST00000484309 PRAMEF19Q5SWL8 479 aa14.45□□□□□ -0.1
MSH5-216ENST00000484309 OLFML2BQ68BL8 750 aa14.45□□□□□ -0.1
MSH5-216ENST00000484309 CCDC136Q96JN2 1154 aa14.45□□□□□ -0.1
MSH5-216ENST00000484309 AGBL1Q96MI9 1066 aa14.45□□□□□ -0.1
MSH5-216ENST00000484309 SLC5A4Q9NY91 659 aa14.45□□□□□ -0.1
MSH5-216ENST00000484309 ZNF536O15090 1300 aa14.44□□□□□ -0.1
MSH5-216ENST00000484309 LRRC37A2A6NM11 1700 aa14.44□□□□□ -0.1
MSH5-216ENST00000484309 ATP2A1O14983 1001 aa14.44□□□□□ -0.1
MSH5-216ENST00000484309 PDHBP11177 359 aa14.44□□□□□ -0.1
MSH5-216ENST00000484309 CYBAP13498 195 aa14.44□□□□□ -0.1
MSH5-216ENST00000484309 ANO1Q5XXA6 986 aa14.44□□□□□ -0.1
MSH5-216ENST00000484309 DPF3Q92784 378 aa14.44□□□□□ -0.1
MSH5-216ENST00000484309 DDX11Q96FC9 970 aa14.44□□□□□ -0.1
MSH5-216ENST00000484309 OGDHLQ9ULD0 1010 aa14.44□□□□□ -0.1
MSH5-216ENST00000484309 TAF6LQ9Y6J9 622 aa14.44□□□□□ -0.1
MSH5-216ENST00000484309 TNKSO95271 1327 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 IGHA2P01877 340 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 CYP21A2P08686 494 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 GOLGA8HP0CJ92 632 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 ALAS1P13196 640 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 MNX1P50219 401 aaPredicted RBP14.43□□□□□ -0.1
MSH5-216ENST00000484309 OAZ1P54368 228 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 ZNF792Q3KQV3 632 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 LHX8Q68G74 356 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 CYB5R4Q7L1T6 521 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 IQCA1Q86XH1 822 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 ANKRD35Q8N283 1001 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 TTC14Q96N46 770 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 ZSCAN10Q96SZ4 725 aaPredicted RBP14.43□□□□□ -0.1
MSH5-216ENST00000484309 KRT23Q9C075 422 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 CPVLQ9H3G5 476 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 RNF146Q9NTX7 359 aa14.43□□□□□ -0.1
MSH5-216ENST00000484309 ZSWIM5Q9P217 1185 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms