RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 FARP2O94887 1054 aaPredicted RBP15.24■□□□□ 0.03
HDAC1-209ENST00000484305 IGHA2P01877 340 aa15.24■□□□□ 0.03
HDAC1-209ENST00000484305 PCP11498 1178 aaKnown RBP15.24■□□□□ 0.03
HDAC1-209ENST00000484305 FCER1AP12319 257 aa15.24■□□□□ 0.03
HDAC1-209ENST00000484305 SLC1A4P43007 532 aa15.24■□□□□ 0.03
HDAC1-209ENST00000484305 RASGRP2Q7LDG7 609 aa15.24■□□□□ 0.03
HDAC1-209ENST00000484305 ABRAQ8N0Z2 381 aa15.24■□□□□ 0.03
HDAC1-209ENST00000484305 GMCL1Q96IK5 515 aa15.24■□□□□ 0.03
HDAC1-209ENST00000484305 TCP11L1Q9NUJ3 509 aa15.24■□□□□ 0.03
HDAC1-209ENST00000484305 ISY1Q9ULR0 285 aaKnown RBP15.24■□□□□ 0.03
HDAC1-209ENST00000484305 FRMPD3Q5JV73 1810 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 ZBED4O75132 1171 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 PGK2P07205 417 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 CHMLP26374 656 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 HOXD11P31277 338 aaPredicted RBP15.23■□□□□ 0.03
HDAC1-209ENST00000484305 CYP2C19P33261 490 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 PRPF38BQ5VTL8 546 aaKnown RBP15.23■□□□□ 0.03
HDAC1-209ENST00000484305 MFSD14CQ5VZR4 134 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 SNRNP48Q6IEG0 339 aaKnown RBP15.23■□□□□ 0.03
HDAC1-209ENST00000484305 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 CPXCR1Q8N123 301 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 MMP19Q99542 508 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 TMEM47Q9BQJ4 181 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 TEX13BQ9BXU2 312 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 RNF41Q9H4P4 317 aaPredicted RBP15.23■□□□□ 0.03
HDAC1-209ENST00000484305 SLC38A10Q9HBR0 1119 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 RAVER2Q9HCJ3 691 aaKnown RBP15.23■□□□□ 0.03
HDAC1-209ENST00000484305 MTMR7Q9Y216 660 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 RIPK3Q9Y572 518 aa15.23■□□□□ 0.03
HDAC1-209ENST00000484305 ATP2A1O14983 1001 aa15.22■□□□□ 0.03
HDAC1-209ENST00000484305 CAPN2P17655 700 aa15.22■□□□□ 0.03
HDAC1-209ENST00000484305 SLC4A3P48751 1232 aa15.22■□□□□ 0.03
HDAC1-209ENST00000484305 STAT2P52630 851 aa15.22■□□□□ 0.03
HDAC1-209ENST00000484305 OLFML2BQ68BL8 750 aa15.22■□□□□ 0.03
HDAC1-209ENST00000484305 RCSD1Q6JBY9 416 aa15.22■□□□□ 0.03
HDAC1-209ENST00000484305 DIS3LQ8TF46 1054 aaKnown RBP15.22■□□□□ 0.03
HDAC1-209ENST00000484305 OGDHLQ9ULD0 1010 aa15.22■□□□□ 0.03
HDAC1-209ENST00000484305 CTDP1Q9Y5B0 961 aaPredicted RBP15.22■□□□□ 0.03
HDAC1-209ENST00000484305 RAD50Q92878 1312 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 TOP1P11387 765 aaKnown RBP15.21■□□□□ 0.03
HDAC1-209ENST00000484305 COPB2P35606 906 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 MNX1P50219 401 aaPredicted RBP15.21■□□□□ 0.03
HDAC1-209ENST00000484305 IKQ13123 557 aaPredicted RBP15.21■□□□□ 0.03
HDAC1-209ENST00000484305 KCTD2Q14681 263 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 IMMTQ16891 758 aaKnown RBP15.21■□□□□ 0.03
HDAC1-209ENST00000484305 LHX8Q68G74 356 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 FAM160B2Q86V87 743 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 SKAP1Q86WV1 359 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 TRPV1Q8NER1 839 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 CHURC1Q8WUH1 139 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 RUFY2Q8WXA3 655 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 ESR2Q92731 530 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 PAWRQ96IZ0 340 aaKnown RBP15.21■□□□□ 0.03
HDAC1-209ENST00000484305 MAML3Q96JK9 1138 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 ZKSCAN3Q9BRR0 538 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 SLC5A4Q9NY91 659 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 CTNNA3Q9UI47 895 aa15.21■□□□□ 0.03
HDAC1-209ENST00000484305 SMCHD1A6NHR9 2005 aa15.21■□□□□ 0.02
HDAC1-209ENST00000484305 ALPK3Q96L96 1907 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 PLA2G6O60733 806 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 KDM4AO75164 1064 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 CYBAP13498 195 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 CNGA1P29973 690 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 SNAP25P60880 206 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 PTH1RQ03431 593 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 ZNF792Q3KQV3 632 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 CENPQQ7L2Z9 268 aaPredicted RBP15.2■□□□□ 0.02
HDAC1-209ENST00000484305 ANKLE1Q8NAG6 615 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 DCAF4Q8WV16 495 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 TTC14Q96N46 770 aa15.2■□□□□ 0.02
HDAC1-209ENST00000484305 B4E1Z4 1266 aa15.19■□□□□ 0.02
HDAC1-209ENST00000484305 FDX1P10109 184 aa15.19■□□□□ 0.02
HDAC1-209ENST00000484305 OAZ1P54368 228 aa15.19■□□□□ 0.02
HDAC1-209ENST00000484305 CCDC96Q2M329 555 aa15.19■□□□□ 0.02
HDAC1-209ENST00000484305 PRAMEF19Q5SWL8 479 aa15.19■□□□□ 0.02
HDAC1-209ENST00000484305 TTBK2Q6IQ55 1244 aa15.19■□□□□ 0.02
HDAC1-209ENST00000484305 DPF3Q92784 378 aa15.19■□□□□ 0.02
HDAC1-209ENST00000484305 HTATIP2Q9BUP3 242 aa15.19■□□□□ 0.02
HDAC1-209ENST00000484305 PRR12Q9ULL5 1215 aa15.19■□□□□ 0.02
HDAC1-209ENST00000484305 CEP290O15078 2479 aa15.19■□□□□ 0.02
HDAC1-209ENST00000484305 ZNF536O15090 1300 aa15.18■□□□□ 0.02
HDAC1-209ENST00000484305 SGSM2O43147 1006 aa15.18■□□□□ 0.02
HDAC1-209ENST00000484305 SLC16A2P36021 539 aa15.18■□□□□ 0.02
HDAC1-209ENST00000484305 NECAB2Q7Z6G3 386 aa15.18■□□□□ 0.02
HDAC1-209ENST00000484305 AGBL1Q96MI9 1066 aa15.18■□□□□ 0.02
HDAC1-209ENST00000484305 GPCPD1Q9NPB8 672 aa15.18■□□□□ 0.02
HDAC1-209ENST00000484305 HOMER2Q9NSB8 354 aa15.18■□□□□ 0.02
HDAC1-209ENST00000484305 ZSWIM5Q9P217 1185 aa15.18■□□□□ 0.02
HDAC1-209ENST00000484305 DDX20Q9UHI6 824 aaKnown RBP15.18■□□□□ 0.02
HDAC1-209ENST00000484305 DIS3Q9Y2L1 958 aaKnown RBP15.18■□□□□ 0.02
HDAC1-209ENST00000484305 FRMPD2Q68DX3 1309 aaPredicted RBP15.17■□□□□ 0.02
HDAC1-209ENST00000484305 DNAJC25-GNG10A0A024R161 153 aa15.17■□□□□ 0.02
HDAC1-209ENST00000484305 PDHBP11177 359 aa15.17■□□□□ 0.02
HDAC1-209ENST00000484305 CCDC174Q6PII3 467 aa15.17■□□□□ 0.02
HDAC1-209ENST00000484305 BTNL9Q6UXG8 535 aa15.17■□□□□ 0.02
HDAC1-209ENST00000484305 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.17■□□□□ 0.02
HDAC1-209ENST00000484305 IQCA1Q86XH1 822 aa15.17■□□□□ 0.02
HDAC1-209ENST00000484305 DGKHQ86XP1 1220 aa15.17■□□□□ 0.02
HDAC1-209ENST00000484305 CHST13Q8NET6 341 aa15.17■□□□□ 0.02
HDAC1-209ENST00000484305 DDX11Q96FC9 970 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms