RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 RIOX2Q8IUF8 465 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 TMTC2Q8N394 836 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 REPS2Q8NFH8 660 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 RAET1EQ8TD07 263 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 KIFC2Q96AC6 838 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 ABHD8Q96I13 439 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 MOV10L1Q9BXT6 1211 aaKnown RBP18.28■□□□□ 0.52
RPP40-206ENST00000483546 TEX13BQ9BXU2 312 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 PORCNQ9H237 461 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 SLC38A10Q9HBR0 1119 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 PNMA2Q9UL42 364 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 ZNF214Q9UL59 606 aaPredicted RBP18.28■□□□□ 0.52
RPP40-206ENST00000483546 HPS5Q9UPZ3 1129 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 IVNS1ABPQ9Y6Y0 642 aa18.28■□□□□ 0.52
RPP40-206ENST00000483546 STAT3P40763 770 aa18.27■□□□□ 0.52
RPP40-206ENST00000483546 FLT3LGP49771 235 aa18.27■□□□□ 0.52
RPP40-206ENST00000483546 PRKCZQ05513 592 aa18.27■□□□□ 0.52
RPP40-206ENST00000483546 PLS1Q14651 629 aa18.27■□□□□ 0.52
RPP40-206ENST00000483546 ASPRV1Q53RT3 343 aa18.27■□□□□ 0.52
RPP40-206ENST00000483546 SAMD1Q6SPF0 538 aaPredicted RBP18.27■□□□□ 0.52
RPP40-206ENST00000483546 NBPF11Q86T75 865 aa18.27■□□□□ 0.52
RPP40-206ENST00000483546 PXYLP1Q8TE99 480 aa18.27■□□□□ 0.52
RPP40-206ENST00000483546 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
RPP40-206ENST00000483546 NUDT12Q9BQG2 462 aa18.27■□□□□ 0.52
RPP40-206ENST00000483546 PTCH2Q9Y6C5 1203 aa18.27■□□□□ 0.52
RPP40-206ENST00000483546 SLC15A5A6NIM6 579 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 PRC1O43663 620 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 PEX10O60683 326 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 ANTXR2P58335 489 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 TMEM67Q5HYA8 995 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 ABRAQ8N0Z2 381 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 SLAIN1Q8ND83 568 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 IGDCC4Q8TDY8 1250 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 GJD2Q9UKL4 321 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 PRR12Q9ULL5 1215 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 MTMR7Q9Y216 660 aa18.26■□□□□ 0.51
RPP40-206ENST00000483546 ECM2O94769 699 aaPredicted RBP18.25■□□□□ 0.51
RPP40-206ENST00000483546 PARP1P09874 1014 aaKnown RBP18.25■□□□□ 0.51
RPP40-206ENST00000483546 XRCC5P13010 732 aaKnown RBP18.25■□□□□ 0.51
RPP40-206ENST00000483546 ERCC3P19447 782 aa18.25■□□□□ 0.51
RPP40-206ENST00000483546 PTPREP23469 700 aa18.25■□□□□ 0.51
RPP40-206ENST00000483546 LIFRP42702 1097 aa18.25■□□□□ 0.51
RPP40-206ENST00000483546 SLC9C1Q4G0N8 1177 aa18.25■□□□□ 0.51
RPP40-206ENST00000483546 MORN1Q5T089 497 aa18.25■□□□□ 0.51
RPP40-206ENST00000483546 SYDE2Q5VT97 1194 aa18.25■□□□□ 0.51
RPP40-206ENST00000483546 TRMT44Q8IYL2 757 aaKnown RBP18.25■□□□□ 0.51
RPP40-206ENST00000483546 RASEFQ8IZ41 740 aa18.25■□□□□ 0.51
RPP40-206ENST00000483546 ARMC5Q96C12 935 aa18.25■□□□□ 0.51
RPP40-206ENST00000483546 GABRQQ9UN88 632 aa18.25■□□□□ 0.51
RPP40-206ENST00000483546 ZNFX1Q9P2E3 1918 aaKnown RBP18.25■□□□□ 0.51
RPP40-206ENST00000483546 GRK4P32298 578 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 RGS2P41220 211 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 GRB14Q14449 540 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 TKFCQ3LXA3 575 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 WDR78Q5VTH9 848 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.24■□□□□ 0.51
RPP40-206ENST00000483546 DHX32Q7L7V1 743 aaKnown RBP18.24■□□□□ 0.51
RPP40-206ENST00000483546 CATIPQ7Z7H3 387 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 NCAPG2Q86XI2 1143 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 USP6NLQ92738 828 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 MAP3K14Q99558 947 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 USP26Q9BXU7 913 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 FBXO40Q9UH90 709 aa18.24■□□□□ 0.51
RPP40-206ENST00000483546 FRMPD2Q68DX3 1309 aaPredicted RBP18.23■□□□□ 0.51
RPP40-206ENST00000483546 SH2B2O14492 632 aaPredicted RBP18.23■□□□□ 0.51
RPP40-206ENST00000483546 PSMA5P28066 241 aa18.23■□□□□ 0.51
RPP40-206ENST00000483546 MAP2K5Q13163 448 aa18.23■□□□□ 0.51
RPP40-206ENST00000483546 SNRNP48Q6IEG0 339 aaKnown RBP18.23■□□□□ 0.51
RPP40-206ENST00000483546 RASGRP2Q7LDG7 609 aa18.23■□□□□ 0.51
RPP40-206ENST00000483546 CHST3Q7LGC8 479 aa18.23■□□□□ 0.51
RPP40-206ENST00000483546 CHST13Q8NET6 341 aa18.23■□□□□ 0.51
RPP40-206ENST00000483546 APBA2Q99767 749 aa18.23■□□□□ 0.51
RPP40-206ENST00000483546 RANBP17Q9H2T7 1088 aaKnown RBP18.23■□□□□ 0.51
RPP40-206ENST00000483546 LY9Q9HBG7 655 aa18.23■□□□□ 0.51
RPP40-206ENST00000483546 GPCPD1Q9NPB8 672 aa18.23■□□□□ 0.51
RPP40-206ENST00000483546 SLC5A4Q9NY91 659 aa18.23■□□□□ 0.51
RPP40-206ENST00000483546 SNX14Q9Y5W7 946 aa18.23■□□□□ 0.51
RPP40-206ENST00000483546 MYH6P13533 1939 aa18.22■□□□□ 0.51
RPP40-206ENST00000483546 ADCY3O60266 1144 aa18.22■□□□□ 0.51
RPP40-206ENST00000483546 DDAH1O94760 285 aa18.22■□□□□ 0.51
RPP40-206ENST00000483546 HOXC6P09630 235 aa18.22■□□□□ 0.51
RPP40-206ENST00000483546 FCER1AP12319 257 aa18.22■□□□□ 0.51
RPP40-206ENST00000483546 TTBK2Q6IQ55 1244 aa18.22■□□□□ 0.51
RPP40-206ENST00000483546 SGMS1Q86VZ5 419 aa18.22■□□□□ 0.51
RPP40-206ENST00000483546 CPXCR1Q8N123 301 aa18.22■□□□□ 0.51
RPP40-206ENST00000483546 RBBP6Q7Z6E9 1792 aaKnown RBP18.22■□□□□ 0.51
RPP40-206ENST00000483546 CCDC69A6NI79 296 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 ICAM1P05362 532 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 CALM1P0DP23 149 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 CALM2P0DP24 149 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 CALM3P0DP25 149 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 UBXN2AP68543 259 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 EXOSC10Q01780 885 aaKnown RBP18.21■□□□□ 0.51
RPP40-206ENST00000483546 TROAPQ12815 778 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 KCTD2Q14681 263 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 GRM4Q14833 912 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 ADCK5Q3MIX3 580 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 ZNF333Q96JL9 665 aa18.21■□□□□ 0.51
RPP40-206ENST00000483546 RAVER2Q9HCJ3 691 aaKnown RBP18.21■□□□□ 0.51
RPP40-206ENST00000483546 ZNF536O15090 1300 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms