RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 ATG4CQ96DT6 458 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 APBA2Q99767 749 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 BACH2Q9BYV9 841 aa11.33□□□□□ -0.6
HMG20B-210ENST00000483417 COBLO75128 1261 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 REC8O95072 547 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 SLC3A2P08195 630 aaKnown RBP11.32□□□□□ -0.6
HMG20B-210ENST00000483417 ERCC3P19447 782 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 CCND3P30281 292 aaPredicted RBP11.32□□□□□ -0.6
HMG20B-210ENST00000483417 ANTXR2P58335 489 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 TSGA10IPQ3SY00 556 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 RCSD1Q6JBY9 416 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 DIS3LQ8TF46 1054 aaKnown RBP11.32□□□□□ -0.6
HMG20B-210ENST00000483417 DPF3Q92784 378 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 CEP95Q96GE4 821 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 TCEANC2Q96MN5 208 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 HTATIP2Q9BUP3 242 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 MROH8Q9H579 483 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 CLIP2Q9UDT6 1046 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 COLQQ9Y215 455 aaPredicted RBP11.32□□□□□ -0.6
HMG20B-210ENST00000483417 MYH8P13535 1937 aa11.32□□□□□ -0.6
HMG20B-210ENST00000483417 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 TSPY2A6NKD2 308 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 VWA5AO00534 786 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 NDUFB10O96000 172 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 TSPY3P0CV98 308 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 TSPY8P0CW00 308 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 EXOSC10Q01780 885 aaKnown RBP11.31□□□□□ -0.6
HMG20B-210ENST00000483417 ATP2B2Q01814 1243 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 FAM83BQ5T0W9 1011 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 WDR78Q5VTH9 848 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 NECAB2Q7Z6G3 386 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 MB21D2Q8IYB1 491 aaPredicted RBP11.31□□□□□ -0.6
HMG20B-210ENST00000483417 ABRAQ8N0Z2 381 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 TRPV1Q8NER1 839 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 LRRC2Q9BYS8 371 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 PRO3102Q9H379 93 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 GOPCQ9HD26 462 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 MTMR4Q9NYA4 1195 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 ZNF214Q9UL59 606 aaPredicted RBP11.31□□□□□ -0.6
HMG20B-210ENST00000483417 PPP1R9AQ9ULJ8 1098 aa11.31□□□□□ -0.6
HMG20B-210ENST00000483417 COL6A1P12109 1028 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 ADORA2AP29274 412 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 CYP2C19P33261 490 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 NOVP48745 357 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 OLFML2BQ68BL8 750 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 RASGRP2Q7LDG7 609 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 RIOX2Q8IUF8 465 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 IGDCC4Q8TDY8 1250 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 NEK1Q96PY6 1258 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 NUP88Q99567 741 aaPredicted RBP11.3□□□□□ -0.6
HMG20B-210ENST00000483417 RNF41Q9H4P4 317 aaPredicted RBP11.3□□□□□ -0.6
HMG20B-210ENST00000483417 ZNF287Q9HBT7 754 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 TCP11L1Q9NUJ3 509 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 SYNPO2Q9UMS6 1093 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 IVNS1ABPQ9Y6Y0 642 aa11.3□□□□□ -0.6
HMG20B-210ENST00000483417 PLIN4Q96Q06 1357 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 SLC25A27O95847 323 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 STAT3P40763 770 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 SEC23AQ15436 765 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 MFSD14CQ5VZR4 134 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 DPP9Q86TI2 863 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 NCAPG2Q86XI2 1143 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 NCOA7Q8NI08 942 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 ESR2Q92731 530 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 JAKMIP1Q96N16 626 aaKnown RBP11.29□□□□□ -0.6
HMG20B-210ENST00000483417 KIF2CQ99661 725 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 TMEM47Q9BQJ4 181 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 LARP6Q9BRS8 491 aaKnown RBP11.29□□□□□ -0.6
HMG20B-210ENST00000483417 KRT23Q9C075 422 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
HMG20B-210ENST00000483417 RIPK3Q9Y572 518 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 NR2E3Q9Y5X4 410 aa11.29□□□□□ -0.6
HMG20B-210ENST00000483417 ZNF236Q9UL36 1845 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 ATP2A1O14983 1001 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 TTLL1O95922 423 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 FCER1AP12319 257 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 CYBAP13498 195 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 PLS1Q14651 629 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 LRRC47Q8N1G4 583 aaKnown RBP11.28□□□□□ -0.6
HMG20B-210ENST00000483417 ENAHQ8N8S7 591 aaPredicted RBP11.28□□□□□ -0.6
HMG20B-210ENST00000483417 PRPF38AQ8NAV1 312 aaKnown RBP11.28□□□□□ -0.6
HMG20B-210ENST00000483417 GMCL1P1Q8NEA9 526 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 MAML3Q96JK9 1138 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
HMG20B-210ENST00000483417 C11orf49Q9H6J7 331 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 DDX20Q9UHI6 824 aaKnown RBP11.28□□□□□ -0.6
HMG20B-210ENST00000483417 PFASO15067 1338 aa11.28□□□□□ -0.6
HMG20B-210ENST00000483417 EPB41L2O43491 1005 aaKnown RBP11.27□□□□□ -0.61
HMG20B-210ENST00000483417 PRC1O43663 620 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 EVI5O60447 810 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
HMG20B-210ENST00000483417 MCCP23508 829 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 FXR1P51114 621 aaKnown RBP eCLIP11.27□□□□□ -0.61
HMG20B-210ENST00000483417 TRDNQ13061 729 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 ZNF792Q3KQV3 632 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 PRAMEF19Q5SWL8 479 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 RNF20Q5VTR2 975 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 SLFN13Q68D06 897 aa11.27□□□□□ -0.61
HMG20B-210ENST00000483417 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms