RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 GOLGA8AA7E2F4 631 aa20.79■□□□□ 0.92
CPNE1-224ENST00000483359 DHX16O60231 1041 aaKnown RBP20.79■□□□□ 0.92
CPNE1-224ENST00000483359 STK3Q13188 491 aa20.79■□□□□ 0.92
CPNE1-224ENST00000483359 CMTR1Q8N1G2 835 aaKnown RBP20.79■□□□□ 0.92
CPNE1-224ENST00000483359 PRPF38AQ8NAV1 312 aaKnown RBP20.79■□□□□ 0.92
CPNE1-224ENST00000483359 TXNRD2Q9NNW7 524 aa20.79■□□□□ 0.92
CPNE1-224ENST00000483359 SAGE1Q9NXZ1 904 aa20.79■□□□□ 0.92
CPNE1-224ENST00000483359 HOXC10Q9NYD6 342 aa20.79■□□□□ 0.92
CPNE1-224ENST00000483359 PRR12Q9ULL5 1215 aa20.79■□□□□ 0.92
CPNE1-224ENST00000483359 A0A0G2JMZ2 1700 aa20.79■□□□□ 0.92
CPNE1-224ENST00000483359 COL11A1P12107 1806 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-224ENST00000483359 KLRF2D3W0D1 207 aa20.78■□□□□ 0.92
CPNE1-224ENST00000483359 HSPA1AP0DMV8 641 aaKnown RBP20.78■□□□□ 0.92
CPNE1-224ENST00000483359 HSPA1BP0DMV9 641 aaKnown RBP20.78■□□□□ 0.92
CPNE1-224ENST00000483359 CALM1P0DP23 149 aa20.78■□□□□ 0.92
CPNE1-224ENST00000483359 CALM2P0DP24 149 aa20.78■□□□□ 0.92
CPNE1-224ENST00000483359 CALM3P0DP25 149 aa20.78■□□□□ 0.92
CPNE1-224ENST00000483359 FAM160B2Q86V87 743 aa20.78■□□□□ 0.92
CPNE1-224ENST00000483359 CHURC1Q8WUH1 139 aa20.78■□□□□ 0.92
CPNE1-224ENST00000483359 PALM3A6NDB9 673 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-224ENST00000483359 METAP2P50579 478 aaKnown RBP eCLIP20.77■□□□□ 0.92
CPNE1-224ENST00000483359 SYDE2Q5VT97 1194 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 FANCBQ8NB91 859 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 VWA5AO00534 786 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 PLEKHA8P1O95397 391 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 KIF5BP33176 963 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 CCT2P78371 535 aaKnown RBP20.77■□□□□ 0.92
CPNE1-224ENST00000483359 RTN1Q16799 776 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 NBPF11Q86T75 865 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 CCDC82Q8N4S0 544 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 VAT1LQ9HCJ6 419 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 BTBD7Q9P203 1132 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 RBPJLQ9UBG7 517 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 TPCN1Q9ULQ1 816 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 HPS5Q9UPZ3 1129 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 MYPNQ86TC9 1320 aa20.77■□□□□ 0.92
CPNE1-224ENST00000483359 PDIA3P30101 505 aaKnown RBP20.76■□□□□ 0.91
CPNE1-224ENST00000483359 PLS1Q14651 629 aa20.76■□□□□ 0.91
CPNE1-224ENST00000483359 ANKRD1Q15327 319 aa20.76■□□□□ 0.91
CPNE1-224ENST00000483359 C17orf99Q6UX52 265 aa20.76■□□□□ 0.91
CPNE1-224ENST00000483359 CTDP1Q9Y5B0 961 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-224ENST00000483359 FOXN1O15353 648 aa20.76■□□□□ 0.91
CPNE1-224ENST00000483359 GCLCP48506 637 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-224ENST00000483359 SLC4A3P48751 1232 aa20.76■□□□□ 0.91
CPNE1-224ENST00000483359 CCDC174Q6PII3 467 aa20.76■□□□□ 0.91
CPNE1-224ENST00000483359 LBX2Q6XYB7 198 aa20.76■□□□□ 0.91
CPNE1-224ENST00000483359 CPXCR1Q8N123 301 aa20.76■□□□□ 0.91
CPNE1-224ENST00000483359 PIBF1Q8WXW3 757 aa20.76■□□□□ 0.91
CPNE1-224ENST00000483359 CFHR5Q9BXR6 569 aa20.76■□□□□ 0.91
CPNE1-224ENST00000483359 NCOA5Q9HCD5 579 aaKnown RBP20.76■□□□□ 0.91
CPNE1-224ENST00000483359 CNMDO75829 334 aa20.75■□□□□ 0.91
CPNE1-224ENST00000483359 CDC27P30260 824 aa20.75■□□□□ 0.91
CPNE1-224ENST00000483359 TMEM132BQ14DG7 1078 aa20.75■□□□□ 0.91
CPNE1-224ENST00000483359 BTNL9Q6UXG8 535 aa20.75■□□□□ 0.91
CPNE1-224ENST00000483359 ADGRF4Q8IZF3 695 aa20.75■□□□□ 0.91
CPNE1-224ENST00000483359 MAP3K14Q99558 947 aa20.75■□□□□ 0.91
CPNE1-224ENST00000483359 ALDH8A1Q9H2A2 487 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-224ENST00000483359 PLA2G6O60733 806 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 LARGE1O95461 756 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 BCRP11274 1271 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 TAL1P17542 331 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-224ENST00000483359 EVCP57679 992 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 SLC35G1Q2M3R5 365 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 Q3C1V9 767 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 HOMER1Q86YM7 354 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 GTF3C2Q8WUA4 911 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-224ENST00000483359 SLC38A10Q9HBR0 1119 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 RAVER2Q9HCJ3 691 aaKnown RBP20.74■□□□□ 0.91
CPNE1-224ENST00000483359 ADAMTS5Q9UNA0 930 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 GPR25O00155 361 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 ST18O60284 1047 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 ZBED4O75132 1171 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 PPFIA3O75145 1194 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 CD2BP2O95400 341 aaKnown RBP20.74■□□□□ 0.91
CPNE1-224ENST00000483359 ADD1P35611 737 aaKnown RBP20.74■□□□□ 0.91
CPNE1-224ENST00000483359 ERVK-9P63128 1117 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 ERVK-24P63145 666 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 FAM110CQ1W6H9 321 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 RABGAP1Q9Y3P9 1069 aa20.74■□□□□ 0.91
CPNE1-224ENST00000483359 CYTH3O43739 400 aa20.73■□□□□ 0.91
CPNE1-224ENST00000483359 TMTC3Q6ZXV5 915 aa20.73■□□□□ 0.91
CPNE1-224ENST00000483359 SRBD1Q8N5C6 995 aaKnown RBP20.73■□□□□ 0.91
CPNE1-224ENST00000483359 REPS2Q8NFH8 660 aa20.73■□□□□ 0.91
CPNE1-224ENST00000483359 GPRC5AQ8NFJ5 357 aa20.73■□□□□ 0.91
CPNE1-224ENST00000483359 JMJD4Q9H9V9 463 aa20.73■□□□□ 0.91
CPNE1-224ENST00000483359 FAM217BQ9NTX9 383 aaPredicted RBP20.73■□□□□ 0.91
CPNE1-224ENST00000483359 RBM28Q9NW13 759 aaKnown RBP20.73■□□□□ 0.91
CPNE1-224ENST00000483359 ZSWIM8A7E2V4 1837 aa20.73■□□□□ 0.91
CPNE1-224ENST00000483359 CDC37Q16543 378 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-224ENST00000483359 ME3Q16798 604 aa20.72■□□□□ 0.91
CPNE1-224ENST00000483359 MB21D1Q8N884 522 aa20.72■□□□□ 0.91
CPNE1-224ENST00000483359 ZNF274Q96GC6 653 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-224ENST00000483359 ZNF214Q9UL59 606 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-224ENST00000483359 BAZ2BQ9UIF8 2168 aaKnown RBP20.72■□□□□ 0.91
CPNE1-224ENST00000483359 RCAN1P53805 252 aa20.72■□□□□ 0.91
CPNE1-224ENST00000483359 ZNF296Q8WUU4 475 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-224ENST00000483359 SPATC1LQ9H0A9 340 aa20.72■□□□□ 0.91
CPNE1-224ENST00000483359 SLKQ9H2G2 1235 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-224ENST00000483359 RANBP17Q9H2T7 1088 aaKnown RBP20.72■□□□□ 0.91
CPNE1-224ENST00000483359 MORF4L1Q9UBU8 362 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms