RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CTR9Q6PD62 1173 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 C16orf86Q6ZW13 317 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 ANKRD33Q7Z3H0 272 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 REPS2Q8NFH8 660 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 NUP133Q8WUM0 1156 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 SYMPKQ92797 1274 aaKnown RBP8.88□□□□□ -0.99
CSDE1-206ENST00000483030 VTI1AQ96AJ9 217 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 DDX11Q96FC9 970 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 DDRGK1Q96HY6 314 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 TOX2Q96NM4 488 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 NUP88Q99567 741 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-206ENST00000483030 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.88□□□□□ -0.99
CSDE1-206ENST00000483030 ZNF576Q9H609 170 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 GOPCQ9HD26 462 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 ZNF214Q9UL59 606 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-206ENST00000483030 FAM184BQ9ULE4 1060 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 RIPK3Q9Y572 518 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 SLC4A4Q9Y6R1 1079 aa8.88□□□□□ -0.99
CSDE1-206ENST00000483030 LAMA2P24043 3122 aaKnown RBP8.87□□□□□ -0.99
CSDE1-206ENST00000483030 SYNRGQ9UMZ2 1314 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 TIMP1P01033 207 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 ATP5JP18859 108 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 IRX5P78411 483 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-206ENST00000483030 UBE3CQ15386 1083 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 SNRNP48Q6IEG0 339 aaKnown RBP8.87□□□□□ -0.99
CSDE1-206ENST00000483030 SIRT2Q8IXJ6 389 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 RPAP2Q8IXW5 612 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-206ENST00000483030 CPXCR1Q8N123 301 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 STK11IPQ8N1F8 1099 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 MSL3Q8N5Y2 521 aaKnown RBP8.87□□□□□ -0.99
CSDE1-206ENST00000483030 USP38Q8NB14 1042 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 KLHDC9Q8NEP7 349 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 HAUS7Q99871 368 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 SLF1Q9BQI6 1058 aa8.87□□□□□ -0.99
CSDE1-206ENST00000483030 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.87□□□□□ -0.99
CSDE1-206ENST00000483030 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.87□□□□□ -0.99
CSDE1-206ENST00000483030 ZHX1Q9UKY1 873 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-206ENST00000483030 DNAJC25-GNG10A0A024R161 153 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 MYADML2A6NDP7 307 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 MOXD2PA6NHM9 499 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 GRXCR1A8MXD5 290 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 F5H6K3 240 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 RAB11FIP3O75154 756 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 DUSP11O75319 330 aaKnown RBP8.86□□□□□ -0.99
CSDE1-206ENST00000483030 HMMRO75330 724 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 C6orf222P0C671 652 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-206ENST00000483030 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
CSDE1-206ENST00000483030 KLRC3Q07444 240 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 TJAP1Q5JTD0 557 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 CCSAPQ6IQ19 270 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-206ENST00000483030 MFSD5Q6N075 450 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 MAMDC4Q6UXC1 1216 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 C16orf59Q7L2K0 433 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 SPRYD3Q8NCJ5 442 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 PPM1EQ8WY54 764 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 TIFAQ96CG3 184 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 GLT1D1Q96MS3 346 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 TEX13BQ9BXU2 312 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 PUS7LQ9H0K6 701 aaKnown RBP8.86□□□□□ -0.99
CSDE1-206ENST00000483030 TBX21Q9UL17 535 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 FRMPD3Q5JV73 1810 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 ZNF236Q9UL36 1845 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 RLFQ13129 1914 aa8.86□□□□□ -0.99
CSDE1-206ENST00000483030 ELP1O95163 1332 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 SYNGAP1Q96PV0 1343 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 LTBP2Q14767 1821 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 VCANP13611 3396 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 ZBED4O75132 1171 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 NDUFB10O96000 172 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 ASGR1P07306 291 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 ACRP10323 421 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 CSF2RAP15509 400 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 RASA1P20936 1047 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 PBX2P40425 430 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 CDK7P50613 346 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 PPIGQ13427 754 aaKnown RBP eCLIP8.85□□□□□ -0.99
CSDE1-206ENST00000483030 ACVR2BQ13705 512 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 CCDC144BQ3MJ40 725 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 GNASQ5JWF2 1037 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 TMEM240Q5SV17 173 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 CCDC129Q6ZRS4 1044 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 PRPF38AQ8NAV1 312 aaKnown RBP8.85□□□□□ -0.99
CSDE1-206ENST00000483030 PCSK9Q8NBP7 692 aaKnown RBP8.85□□□□□ -0.99
CSDE1-206ENST00000483030 SPOCK2Q92563 424 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 MKNK2Q9HBH9 465 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 SPC25Q9HBM1 224 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 RAVER2Q9HCJ3 691 aaKnown RBP8.85□□□□□ -0.99
CSDE1-206ENST00000483030 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.85□□□□□ -0.99
CSDE1-206ENST00000483030 NYAP2Q9P242 653 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 CLIP2Q9UDT6 1046 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 CTDP1Q9Y5B0 961 aaPredicted RBP8.85□□□□□ -0.99
CSDE1-206ENST00000483030 ROBO3Q96MS0 1386 aa8.85□□□□□ -0.99
CSDE1-206ENST00000483030 MROH7Q68CQ1 1323 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 ZBED9Q6R2W3 1325 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 MINDY4BA8MYZ0 360 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 ARVCFO00192 962 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 ADCY6O43306 1168 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 CST5P28325 142 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-206ENST00000483030 ZSCAN25Q6NSZ9 544 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 CCDC174Q6PII3 467 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms