RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 FKBP1CQ5VVH2 108 aa18.01■□□□□ 0.47
RXRA-202ENST00000481739 ZNF713Q8N859 430 aaPredicted RBP18.01■□□□□ 0.47
RXRA-202ENST00000481739 MPHOSPH10O00566 681 aaKnown RBP18■□□□□ 0.47
RXRA-202ENST00000481739 ZNF500O60304 480 aaPredicted RBP18■□□□□ 0.47
RXRA-202ENST00000481739 PARP1P09874 1014 aaKnown RBP18■□□□□ 0.47
RXRA-202ENST00000481739 AKR1B1P15121 316 aa18■□□□□ 0.47
RXRA-202ENST00000481739 TNNI2P48788 182 aa18■□□□□ 0.47
RXRA-202ENST00000481739 NLRP12P59046 1061 aa18■□□□□ 0.47
RXRA-202ENST00000481739 KRBA2Q6ZNG9 492 aa18■□□□□ 0.47
RXRA-202ENST00000481739 PCDHA4Q9UN74 947 aa18■□□□□ 0.47
RXRA-202ENST00000481739 hCG_1642624A0A1W2PR95 340 aa18■□□□□ 0.47
RXRA-202ENST00000481739 SOCS7O14512 581 aa18■□□□□ 0.47
RXRA-202ENST00000481739 DDNO94850 711 aaPredicted RBP18■□□□□ 0.47
RXRA-202ENST00000481739 CDC25BP30305 580 aa18■□□□□ 0.47
RXRA-202ENST00000481739 TTC38Q5R3I4 469 aa18■□□□□ 0.47
RXRA-202ENST00000481739 C11orf57Q6ZUT1 292 aaPredicted RBP18■□□□□ 0.47
RXRA-202ENST00000481739 CNNM3Q8NE01 707 aa18■□□□□ 0.47
RXRA-202ENST00000481739 CEP95Q96GE4 821 aa18■□□□□ 0.47
RXRA-202ENST00000481739 CLIC6Q96NY7 704 aa18■□□□□ 0.47
RXRA-202ENST00000481739 PYM1Q9BRP8 204 aaKnown RBP18■□□□□ 0.47
RXRA-202ENST00000481739 TMEM39BQ9GZU3 492 aa18■□□□□ 0.47
RXRA-202ENST00000481739 BARHL2Q9NY43 387 aa18■□□□□ 0.47
RXRA-202ENST00000481739 GPRC5DQ9NZD1 345 aa18■□□□□ 0.47
RXRA-202ENST00000481739 CNTNAP1P78357 1384 aa18■□□□□ 0.47
RXRA-202ENST00000481739 ATRNL1Q5VV63 1379 aa18■□□□□ 0.47
RXRA-202ENST00000481739 COL2A1P02458 1487 aaPredicted RBP18■□□□□ 0.47
RXRA-202ENST00000481739 SIPA1L1O43166 1804 aa18■□□□□ 0.47
RXRA-202ENST00000481739 FAM83AQ86UY5 434 aa17.99■□□□□ 0.47
RXRA-202ENST00000481739 BLIDQ8IZY5 108 aa17.99■□□□□ 0.47
RXRA-202ENST00000481739 STAG2Q8N3U4 1231 aa17.99■□□□□ 0.47
RXRA-202ENST00000481739 CCDC17Q96LX7 622 aa17.99■□□□□ 0.47
RXRA-202ENST00000481739 SCAF8Q9UPN6 1271 aaKnown RBP17.99■□□□□ 0.47
RXRA-202ENST00000481739 KLRF2D3W0D1 207 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 GRIN3BO60391 1043 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 TPM4P67936 248 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 ATP2C1P98194 919 aaPredicted RBP17.98■□□□□ 0.47
RXRA-202ENST00000481739 CERKLQ49MI3 558 aaPredicted RBP17.98■□□□□ 0.47
RXRA-202ENST00000481739 ASPRV1Q53RT3 343 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 PLA2G4DQ86XP0 818 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 DNAJC18Q9H819 358 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 MTMR4Q9NYA4 1195 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 HACL1Q9UJ83 578 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 IGKV6D-41A0A0C4DH26 115 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 SMTNL1A8MU46 457 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 LMOD1P29536 600 aaPredicted RBP17.98■□□□□ 0.47
RXRA-202ENST00000481739 EPS15P42566 896 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 TNFAIP1Q13829 316 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 ARL6IP4Q66PJ3 421 aaKnown RBP17.98■□□□□ 0.47
RXRA-202ENST00000481739 TRIM5Q9C035 493 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.98■□□□□ 0.479e-7■■■■□ 21.7
RXRA-202ENST00000481739 MTMR7Q9Y216 660 aa17.98■□□□□ 0.47
RXRA-202ENST00000481739 ASTN2O75129 1339 aaPredicted RBP17.97■□□□□ 0.47
RXRA-202ENST00000481739 AP5Z1O43299 807 aa17.97■□□□□ 0.47
RXRA-202ENST00000481739 ZNF75DP51815 510 aa17.97■□□□□ 0.47
RXRA-202ENST00000481739 RASA3Q14644 834 aa17.97■□□□□ 0.47
RXRA-202ENST00000481739 DHX40Q8IX18 779 aaKnown RBP17.97■□□□□ 0.47
RXRA-202ENST00000481739 RRP36Q96EU6 259 aaKnown RBP17.97■□□□□ 0.47
RXRA-202ENST00000481739 MRFAP1L1Q96HT8 127 aa17.97■□□□□ 0.47
RXRA-202ENST00000481739 SEC63Q9UGP8 760 aaKnown RBP17.97■□□□□ 0.47
RXRA-202ENST00000481739 IKBKBO14920 756 aa17.96■□□□□ 0.47
RXRA-202ENST00000481739 TTLL1O95922 423 aa17.96■□□□□ 0.47
RXRA-202ENST00000481739 EARS2Q5JPH6 523 aaKnown RBP17.96■□□□□ 0.47
RXRA-202ENST00000481739 TRPM4Q8TD43 1214 aa17.96■□□□□ 0.47
RXRA-202ENST00000481739 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.96■□□□□ 0.47
RXRA-202ENST00000481739 HERC5Q9UII4 1024 aaKnown RBP17.96■□□□□ 0.47
RXRA-202ENST00000481739 CYTH3O43739 400 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 SNHG28P0DPA3 235 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 ATP2B1P20020 1258 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 GNA11P29992 359 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 LONRF3Q496Y0 759 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 DPY19L2Q6NUT2 758 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 TATDN1Q6P1N9 297 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 PIK3AP1Q6ZUJ8 805 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 METTL16Q86W50 562 aaKnown RBP17.95■□□□□ 0.46
RXRA-202ENST00000481739 TRIML1Q8N9V2 468 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 CSRNP2Q9H175 543 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 CCDC194A0A1B0GVG4 234 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 ESYT2A0FGR8 921 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 M0R2N6 131 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 STXBP3O00186 592 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 GDF11O95390 407 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 ATP2B2Q01814 1243 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 DPCR1Q3MIW9 517 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 NT5DC1Q5TFE4 455 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 WWC2Q6AWC2 1192 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 CDAN1Q8IWY9 1227 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 ZMYND12Q9H0C1 365 aa17.95■□□□□ 0.46
RXRA-202ENST00000481739 FAM205CA6NFA0 338 aa17.94■□□□□ 0.46
RXRA-202ENST00000481739 LAD1O00515 517 aa17.94■□□□□ 0.46
RXRA-202ENST00000481739 PDHBP11177 359 aa17.94■□□□□ 0.46
RXRA-202ENST00000481739 ORC2Q13416 577 aaPredicted RBP17.94■□□□□ 0.46
RXRA-202ENST00000481739 POSTNQ15063 836 aa17.94■□□□□ 0.46
RXRA-202ENST00000481739 ABCB5Q2M3G0 1257 aa17.94■□□□□ 0.46
RXRA-202ENST00000481739 ANGEL2Q5VTE6 544 aaKnown RBP17.94■□□□□ 0.46
RXRA-202ENST00000481739 MIGA2Q7L4E1 593 aa17.94■□□□□ 0.46
RXRA-202ENST00000481739 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
RXRA-202ENST00000481739 CLEC10AQ8IUN9 316 aa17.94■□□□□ 0.46
RXRA-202ENST00000481739 RIOX1Q9H6W3 641 aa17.94■□□□□ 0.46
RXRA-202ENST00000481739 CLIP2Q9UDT6 1046 aa17.94■□□□□ 0.46
RXRA-202ENST00000481739 DACH1Q9UI36 760 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms