RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 NONOQ15233 471 aaKnown RBP eCLIP12.78□□□□□ -0.36
DDX39B-219ENST00000481456 KCTD16Q68DU8 428 aa12.78□□□□□ -0.36
DDX39B-219ENST00000481456 BLIDQ8IZY5 108 aa12.78□□□□□ -0.36
DDX39B-219ENST00000481456 ZBTB38Q8NAP3 1195 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-219ENST00000481456 PRR29P0C7W0 189 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 FMNL3Q8IVF7 1028 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 CUL5Q93034 780 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 CNOT6LQ96LI5 555 aaKnown RBP12.77□□□□□ -0.36
DDX39B-219ENST00000481456 HINFPQ9BQA5 517 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.77□□□□□ -0.36
DDX39B-219ENST00000481456 BUB1O43683 1085 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 ACTN4O43707 911 aaKnown RBP12.77□□□□□ -0.36
DDX39B-219ENST00000481456 SCG2P13521 617 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 TNNI2P48788 182 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 KRT71Q3SY84 523 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 ORAI2Q96SN7 254 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 THAP9Q9H5L6 903 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 MAGEF1Q9HAY2 307 aa12.77□□□□□ -0.36
DDX39B-219ENST00000481456 MAP2P11137 1827 aaKnown RBP12.77□□□□□ -0.36
DDX39B-219ENST00000481456 CTDNEP1O95476 244 aa12.77□□□□□ -0.37
DDX39B-219ENST00000481456 TBC1D8O95759 1140 aa12.77□□□□□ -0.37
DDX39B-219ENST00000481456 SLC8A1P32418 973 aa12.77□□□□□ -0.37
DDX39B-219ENST00000481456 GUCY2DQ02846 1103 aa12.77□□□□□ -0.37
DDX39B-219ENST00000481456 SNCBQ16143 134 aa12.77□□□□□ -0.37
DDX39B-219ENST00000481456 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.37
DDX39B-219ENST00000481456 SYCE1Q8N0S2 351 aa12.77□□□□□ -0.37
DDX39B-219ENST00000481456 CRACR2BQ8N4Y2 399 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-219ENST00000481456 DHTKD1Q96HY7 919 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-219ENST00000481456 EPSTI1Q96J88 318 aa12.77□□□□□ -0.37
DDX39B-219ENST00000481456 NHEJ1Q9H9Q4 299 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-219ENST00000481456 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.379e-20■□□□□ 9.5
DDX39B-219ENST00000481456 EXOC5O00471 708 aa12.77□□□□□ -0.37
DDX39B-219ENST00000481456 REXO1L1PQ8IX06 675 aa12.77□□□□□ -0.37
DDX39B-219ENST00000481456 ATP5DP30049 168 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 GGCXP38435 758 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 ST3GAL1Q11201 340 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 LRWD1Q9UFC0 647 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 NIP7Q9Y221 180 aaKnown RBP eCLIP12.76□□□□□ -0.375e-52■■□□□ 13.4
DDX39B-219ENST00000481456 H7C1W4 665 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 TXKP42681 527 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 VSNL1P62760 191 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 ZBED6P86452 979 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 ATP11AP98196 1134 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 EMBQ6PCB8 327 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 KIDINS220Q9ULH0 1771 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 TEX33O43247 280 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 RPL13P26373 211 aaKnown RBP12.76□□□□□ -0.37
DDX39B-219ENST00000481456 USP14P54578 494 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 NNTQ13423 1086 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 MTF1Q14872 753 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 GKAP1Q5VSY0 366 aaPredicted RBP12.76□□□□□ -0.37
DDX39B-219ENST00000481456 SYCP3Q8IZU3 236 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 MB21D1Q8N884 522 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 TRIM7Q9C029 511 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 VIPAS39Q9H9C1 493 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 ZSWIM5Q9P217 1185 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 ANKARQ7Z5J8 1434 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 ERVV-2B6SEH9 535 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 ANKRD65E5RJM6 399 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 TRIM66O15016 1216 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 MYL1P05976 194 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 ARID4AP29374 1257 aaPredicted RBP12.76□□□□□ -0.37
DDX39B-219ENST00000481456 CALCOCO2Q13137 446 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 E2F4Q16254 413 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 TC2NQ8N9U0 490 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 NLRC4Q9NPP4 1024 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 KCND1Q9NSA2 647 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 RNF14Q9UBS8 474 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 FAM169AQ9Y6X4 670 aa12.76□□□□□ -0.37
DDX39B-219ENST00000481456 A0A1B0GTH6 734 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 ANO9A1A5B4 782 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 DCAF17Q5H9S7 520 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-219ENST00000481456 DYMQ7RTS9 669 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 CADPS2Q86UW7 1296 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 HNRNPLLQ8WVV9 542 aaKnown RBP12.75□□□□□ -0.37
DDX39B-219ENST00000481456 MTUS1Q9ULD2 1270 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 ABCC12Q96J65 1359 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 FLOT1O75955 427 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 SETDB1Q15047 1291 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 PI16Q6UXB8 463 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 PNMA8AQ86V59 439 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-219ENST00000481456 FBF1Q8TES7 1133 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 NAP1L4Q99733 375 aaKnown RBP12.75□□□□□ -0.37
DDX39B-219ENST00000481456 PAIP2Q9BPZ3 127 aaKnown RBP12.75□□□□□ -0.37
DDX39B-219ENST00000481456 CUEDC2Q9H467 287 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 MRPL44Q9H9J2 332 aaKnown RBP12.75□□□□□ -0.37
DDX39B-219ENST00000481456 KCNK9Q9NPC2 374 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 CETN3O15182 167 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 GNA14O95837 355 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 PHKA1P46020 1223 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 CLUL1Q15846 466 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 CCDC6Q16204 474 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 TAOK1Q7L7X3 1001 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 LZTS2Q9BRK4 669 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 TARSL2A2RTX5 802 aaKnown RBP12.75□□□□□ -0.37
DDX39B-219ENST00000481456 FOXN1O15353 648 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 IFT88Q13099 833 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 SEL1L2Q5TEA6 688 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 PEX26Q7Z412 305 aa12.75□□□□□ -0.37
DDX39B-219ENST00000481456 TBC1D10CQ8IV04 446 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms