RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 NCAPG2Q86XI2 1143 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 NACA2Q9H009 215 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 PNMA3Q9UL41 463 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 ECM2O94769 699 aaPredicted RBP10.48□□□□□ -0.73
GARNL3-216ENST00000481242 MMP10P09238 476 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 CD19P15391 556 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 YARSP54577 528 aaKnown RBP10.48□□□□□ -0.73
GARNL3-216ENST00000481242 ZNF569Q5MCW4 686 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 CFAP58Q5T655 872 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 DPP9Q86TI2 863 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 AK8Q96MA6 479 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 ZNF830Q96NB3 372 aaPredicted RBP10.48□□□□□ -0.73
GARNL3-216ENST00000481242 VPS16Q9H269 839 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 NFE2L3Q9Y4A8 694 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 CD2APQ9Y5K6 639 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 NDUFB9Q9Y6M9 179 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 JCADQ9P266 1359 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 AFF2P51816 1311 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 DAPK3O43293 454 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 ATP5DP30049 168 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 PRR16Q569H4 304 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 FAM47CQ5HY64 1035 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 TTC16Q8NEE8 873 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 TNS3Q68CZ2 1445 aa10.48□□□□□ -0.73
GARNL3-216ENST00000481242 ARHGEF37A1IGU5 675 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 VGLL3A8MV65 326 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 TNNI1P19237 187 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 ZNF365Q70YC5 407 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 PODNQ7Z5L7 613 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 RBSNQ9H1K0 784 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 SUDS3Q9H7L9 328 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-216ENST00000481242 LMBRD1Q9NUN5 540 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 CPSF1Q10570 1443 aaKnown RBP10.47□□□□□ -0.73
GARNL3-216ENST00000481242 TNNC2P02585 160 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 ADD2P35612 726 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 ARL1P40616 181 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-216ENST00000481242 FANCCQ00597 558 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 XKR9Q5GH70 373 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 DYMQ7RTS9 669 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 AP5M1Q9H0R1 490 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 ZEB2O60315 1214 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 XRCC5P13010 732 aaKnown RBP10.47□□□□□ -0.73
GARNL3-216ENST00000481242 PROSER3Q2NL68 480 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 GPBP1Q86WP2 473 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 FAM178BQ8IXR5 827 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 LRRC47Q8N1G4 583 aaKnown RBP10.47□□□□□ -0.73
GARNL3-216ENST00000481242 EDC3Q96F86 508 aaKnown RBP10.47□□□□□ -0.73
GARNL3-216ENST00000481242 H7C1W4 665 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 CMA1P23946 247 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 LIG4P49917 911 aa10.47□□□□□ -0.73
GARNL3-216ENST00000481242 RIOK1Q9BRS2 568 aaKnown RBP10.47□□□□□ -0.73
GARNL3-216ENST00000481242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.47□□□□□ -0.73
GARNL3-216ENST00000481242 ARHGAP6O43182 974 aa10.46□□□□□ -0.73
GARNL3-216ENST00000481242 ASNSP08243 561 aa10.46□□□□□ -0.73
GARNL3-216ENST00000481242 BMP3P12645 472 aa10.46□□□□□ -0.73
GARNL3-216ENST00000481242 FAM81BQ96LP2 452 aa10.46□□□□□ -0.73
GARNL3-216ENST00000481242 DDX25Q9UHL0 483 aaKnown RBP10.46□□□□□ -0.73
GARNL3-216ENST00000481242 E7EVH7 732 aa10.46□□□□□ -0.73
GARNL3-216ENST00000481242 MAGEA1P43355 309 aa10.46□□□□□ -0.73
GARNL3-216ENST00000481242 FBXO18Q8NFZ0 1043 aa10.46□□□□□ -0.73
GARNL3-216ENST00000481242 PPP1R9BQ96SB3 815 aa10.46□□□□□ -0.73
GARNL3-216ENST00000481242 FOXP1Q9H334 677 aaPredicted RBP10.46□□□□□ -0.73
GARNL3-216ENST00000481242 LZTFL1Q9NQ48 299 aa10.46□□□□□ -0.73
GARNL3-216ENST00000481242 ADCY9O60503 1353 aa10.46□□□□□ -0.73
GARNL3-216ENST00000481242 KRT19P08727 400 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 KRT9P35527 623 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 KLHL30Q0D2K2 578 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 PPP2R5EQ16537 467 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 ME3Q16798 604 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 NELFBQ8WX92 580 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 PUS3Q9BZE2 481 aaKnown RBP10.46□□□□□ -0.74
GARNL3-216ENST00000481242 ARMCX3Q9UH62 379 aaPredicted RBP10.46□□□□□ -0.74
GARNL3-216ENST00000481242 A0A1B0GUA9 196 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.74
GARNL3-216ENST00000481242 RFX1P22670 979 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 STAT1P42224 750 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 DMP1Q13316 513 aaPredicted RBP10.46□□□□□ -0.74
GARNL3-216ENST00000481242 SPOUT1Q5T280 376 aaKnown RBP10.46□□□□□ -0.74
GARNL3-216ENST00000481242 RNF187Q5TA31 235 aaPredicted RBP10.46□□□□□ -0.74
GARNL3-216ENST00000481242 METTL13Q8N6R0 699 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 RETREG2Q8NC44 543 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 CCDC114Q96M63 670 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 FAM193BQ96PV7 902 aaPredicted RBP10.46□□□□□ -0.74
GARNL3-216ENST00000481242 CTTNBP2NLQ9P2B4 639 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 SPATA31A6Q5VVP1 1343 aa10.46□□□□□ -0.74
GARNL3-216ENST00000481242 JAK2O60674 1132 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 KIF11P52732 1056 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 SFMBT2Q5VUG0 894 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 LRCH2Q5VUJ6 765 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 TTLL11Q8NHH1 800 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 MYL1P05976 194 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 ADD1P35611 737 aaKnown RBP10.45□□□□□ -0.74
GARNL3-216ENST00000481242 CDHR2Q9BYE9 1310 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 KIF1CO43896 1103 aaKnown RBP10.45□□□□□ -0.74
GARNL3-216ENST00000481242 ZNF500O60304 480 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-216ENST00000481242 USP17L8P0C7I0 530 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 GSPT1P15170 499 aaKnown RBP10.45□□□□□ -0.74
GARNL3-216ENST00000481242 GAP43P17677 238 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 POLR2BP30876 1174 aaKnown RBP10.45□□□□□ -0.74
GARNL3-216ENST00000481242 PPP1R2P3Q6NXS1 205 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms