RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 R3HDMLQ9H3Y0 253 aa14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 SMCHD1A6NHR9 2005 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 ZBTB43O43298 467 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 TBC1D8O95759 1140 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 GOLGA8HP0CJ92 632 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 FDX1P10109 184 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 PDIA3P30101 505 aaKnown RBP14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 KIF5BP33176 963 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 PPP2R5BQ15173 497 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 C17orf99Q6UX52 265 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 CTCFLQ8NI51 663 aaPredicted RBP14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 SMCR8Q8TEV9 937 aaPredicted RBP14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 ATG4CQ96DT6 458 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 RBPJLQ9UBG7 517 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 HPS5Q9UPZ3 1129 aa14.43□□□□□ -0.1
SHROOM3-205ENST00000481002 KLRF2D3W0D1 207 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 VWA5AO00534 786 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 BCRP11274 1271 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 RXRAP19793 462 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 SMARCA1P28370 1054 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 SLC16A2P36021 539 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 GNAQP50148 359 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 NOM1Q5C9Z4 860 aaKnown RBP14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 SYDE2Q5VT97 1194 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 MICU3Q86XE3 530 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 MB21D1Q8N884 522 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 KIFC2Q96AC6 838 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 LZTS2Q9BRK4 669 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 LARP6Q9BRS8 491 aaKnown RBP14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 UBA5Q9GZZ9 404 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 FAM217BQ9NTX9 383 aaPredicted RBP14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 MORF4L1Q9UBU8 362 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 PRR12Q9ULL5 1215 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 ISY1Q9ULR0 285 aaKnown RBP14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 RABGAP1Q9Y3P9 1069 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 NID2Q14112 1375 aa14.42□□□□□ -0.1
SHROOM3-205ENST00000481002 GOLGA8BA8MQT2 603 aa14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 CNMDO75829 334 aa14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 IKQ13123 557 aaPredicted RBP14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 RAB11FIP4Q86YS3 637 aa14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 REPS2Q8NFH8 660 aa14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 RIOX1Q9H6W3 641 aa14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 SLC38A10Q9HBR0 1119 aa14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 TXNRD2Q9NNW7 524 aa14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 RBM28Q9NW13 759 aaKnown RBP14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 TPCN1Q9ULQ1 816 aa14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 MGAMO43451 1857 aa14.41□□□□□ -0.1
SHROOM3-205ENST00000481002 CCDC196A0A1B0GTZ2 297 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 GOLGA8AA7E2F4 631 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 ATP2A1O14983 1001 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 ZBED4O75132 1171 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 CDC27P30260 824 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 METAP2P50579 478 aaKnown RBP eCLIP14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 RTN1Q16799 776 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 FAM110CQ1W6H9 321 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 SLC35G1Q2M3R5 365 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 SAMD1Q6SPF0 538 aaPredicted RBP14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 NBPF11Q86T75 865 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 CCDC144CPQ8IYA2 1237 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 ADGRF4Q8IZF3 695 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 MTMR8Q96EF0 704 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 RANBP17Q9H2T7 1088 aaKnown RBP14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 CPVLQ9H3G5 476 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 BTBD7Q9P203 1132 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 CPA4Q9UI42 421 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 NAP1L2Q9ULW6 460 aaPredicted RBP14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 LIMCH1Q9UPQ0 1083 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 DOCK3Q8IZD9 2030 aa14.4□□□□□ -0.1
SHROOM3-205ENST00000481002 GPR25O00155 361 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 CYTH3O43739 400 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 ST18O60284 1047 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 PFKFB2O60825 505 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 PLEKHA8P1O95397 391 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 ADD1P35611 737 aaKnown RBP14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 ERVK-9P63128 1117 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 ERVK-24P63145 666 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 TMEM132BQ14DG7 1078 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 Q3C1V9 767 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 TMTC3Q6ZXV5 915 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 SRBD1Q8N5C6 995 aaKnown RBP14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 ANKRD13CQ8N6S4 541 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 GPRC5AQ8NFJ5 357 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 PAGR1Q9BTK6 254 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 SPZ1Q9BXG8 430 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 JMJD4Q9H9V9 463 aa14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 ZNF214Q9UL59 606 aaPredicted RBP14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 ZNFX1Q9P2E3 1918 aaKnown RBP14.39□□□□□ -0.11
SHROOM3-205ENST00000481002 PEX10O60683 326 aa14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 HSPA1AP0DMV8 641 aaKnown RBP14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 HSPA1BP0DMV9 641 aaKnown RBP14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 OAZ1P54368 228 aa14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 FUT2Q10981 343 aa14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 NTRK3Q16288 839 aa14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 ME3Q16798 604 aa14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 ZSCAN31Q96LW9 406 aaPredicted RBP14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 SPATC1LQ9H0A9 340 aa14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 SLKQ9H2G2 1235 aaPredicted RBP14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 VAT1LQ9HCJ6 419 aa14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 CASP8AP2Q9UKL3 1982 aa14.38□□□□□ -0.11
SHROOM3-205ENST00000481002 ZNF536O15090 1300 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms