RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 UBA5Q9GZZ9 404 aa23.83■■□□□ 1.41
CTSA-206ENST00000480961 PRR12Q9ULL5 1215 aa23.83■■□□□ 1.41
CTSA-206ENST00000480961 PTPN22Q9Y2R2 807 aa23.83■■□□□ 1.41
CTSA-206ENST00000480961 CTDP1Q9Y5B0 961 aaPredicted RBP23.83■■□□□ 1.41
CTSA-206ENST00000480961 CCNA1P78396 465 aa23.82■■□□□ 1.4
CTSA-206ENST00000480961 EXOSC10Q01780 885 aaKnown RBP23.82■■□□□ 1.4
CTSA-206ENST00000480961 C8orf34Q49A92 452 aa23.82■■□□□ 1.4
CTSA-206ENST00000480961 DHX32Q7L7V1 743 aaKnown RBP23.82■■□□□ 1.4
CTSA-206ENST00000480961 CWC22Q9HCG8 908 aaKnown RBP23.82■■□□□ 1.4
CTSA-206ENST00000480961 RAVER2Q9HCJ3 691 aaKnown RBP23.82■■□□□ 1.4
CTSA-206ENST00000480961 SRRDQ9UH36 339 aa23.82■■□□□ 1.4
CTSA-206ENST00000480961 ZSWIM8A7E2V4 1837 aa23.82■■□□□ 1.4
CTSA-206ENST00000480961 HTTP42858 3142 aa23.82■■□□□ 1.4
CTSA-206ENST00000480961 MAPK4P31152 587 aa23.81■■□□□ 1.4
CTSA-206ENST00000480961 SYDE2Q5VT97 1194 aa23.81■■□□□ 1.4
CTSA-206ENST00000480961 NFXL1Q6ZNB6 911 aa23.81■■□□□ 1.4
CTSA-206ENST00000480961 NCAPG2Q86XI2 1143 aa23.81■■□□□ 1.4
CTSA-206ENST00000480961 COA7Q96BR5 231 aa23.81■■□□□ 1.4
CTSA-206ENST00000480961 SLC38A10Q9HBR0 1119 aa23.81■■□□□ 1.4
CTSA-206ENST00000480961 ZNF214Q9UL59 606 aaPredicted RBP23.81■■□□□ 1.4
CTSA-206ENST00000480961 PTCH2Q9Y6C5 1203 aa23.81■■□□□ 1.4
CTSA-206ENST00000480961 EPB41L2O43491 1005 aaKnown RBP23.8■■□□□ 1.4
CTSA-206ENST00000480961 PLA2G6O60733 806 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 ERCC3P19447 782 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 HOXD10P28358 340 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 STAT3P40763 770 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 CCDC174Q6PII3 467 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 GPR142Q7Z601 462 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 PLEKHH3Q7Z736 793 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 RAB11FIP4Q86YS3 637 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 STAG2Q8N3U4 1231 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 TMEM87BQ96K49 555 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 MYL10Q9BUA6 226 aa23.8■■□□□ 1.4
CTSA-206ENST00000480961 GNRH1P01148 92 aa23.79■■□□□ 1.4
CTSA-206ENST00000480961 PARP1P09874 1014 aaKnown RBP23.79■■□□□ 1.4
CTSA-206ENST00000480961 TAL1P17542 331 aaPredicted RBP23.79■■□□□ 1.4
CTSA-206ENST00000480961 FLT3LGP49771 235 aa23.79■■□□□ 1.4
CTSA-206ENST00000480961 PKN2Q16513 984 aaKnown RBP23.79■■□□□ 1.4
CTSA-206ENST00000480961 FBXO46Q6PJ61 603 aaPredicted RBP23.79■■□□□ 1.4
CTSA-206ENST00000480961 BTNL9Q6UXG8 535 aa23.79■■□□□ 1.4
CTSA-206ENST00000480961 CATIPQ7Z7H3 387 aa23.79■■□□□ 1.4
CTSA-206ENST00000480961 NUP133Q8WUM0 1156 aa23.79■■□□□ 1.4
CTSA-206ENST00000480961 RIPK3Q9Y572 518 aa23.79■■□□□ 1.4
CTSA-206ENST00000480961 RLFQ13129 1914 aa23.78■■□□□ 1.4
CTSA-206ENST00000480961 CCDC69A6NI79 296 aa23.78■■□□□ 1.4
CTSA-206ENST00000480961 CASTP20810 708 aaKnown RBP23.78■■□□□ 1.4
CTSA-206ENST00000480961 GPATCH4Q5T3I0 446 aaKnown RBP23.78■■□□□ 1.4
CTSA-206ENST00000480961 SNRNP48Q6IEG0 339 aaKnown RBP23.78■■□□□ 1.4
CTSA-206ENST00000480961 BLOC1S2Q6QNY1 142 aa23.78■■□□□ 1.4
CTSA-206ENST00000480961 AGBL1Q96MI9 1066 aa23.78■■□□□ 1.4
CTSA-206ENST00000480961 GJD2Q9UKL4 321 aa23.78■■□□□ 1.4
CTSA-206ENST00000480961 HMGB1P09429 215 aaKnown RBP23.77■■□□□ 1.4
CTSA-206ENST00000480961 RXRAP19793 462 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 TROAPQ12815 778 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 ASPRV1Q53RT3 343 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 RIOX2Q8IUF8 465 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 ZNF654Q8IZM8 581 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 RAET1EQ8TD07 263 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 MTA3Q9BTC8 594 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 TEX13BQ9BXU2 312 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 VAT1LQ9HCJ6 419 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 MAD2L2Q9UI95 211 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 HPS5Q9UPZ3 1129 aa23.77■■□□□ 1.4
CTSA-206ENST00000480961 RPS6KB1P23443 525 aa23.76■■□□□ 1.39
CTSA-206ENST00000480961 LIFRP42702 1097 aa23.76■■□□□ 1.39
CTSA-206ENST00000480961 GRM4Q14833 912 aa23.76■■□□□ 1.39
CTSA-206ENST00000480961 CCDC144CPQ8IYA2 1237 aa23.76■■□□□ 1.39
CTSA-206ENST00000480961 ZNF536O15090 1300 aa23.76■■□□□ 1.39
CTSA-206ENST00000480961 KLRF2D3W0D1 207 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 CYP2B6P20813 491 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 PTPREP23469 700 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 PSMA5P28066 241 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 PRMT2P55345 433 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 FGD1P98174 961 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 Q6ZUG5 572 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 TMTC2Q8N394 836 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 SHCBP1Q8NEM2 672 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 RANBP17Q9H2T7 1088 aaKnown RBP23.75■■□□□ 1.39
CTSA-206ENST00000480961 MROH8Q9H579 483 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 HOMER2Q9NSB8 354 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 BRPF3Q9ULD4 1205 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 WDR19Q8NEZ3 1342 aa23.75■■□□□ 1.39
CTSA-206ENST00000480961 PALM3A6NDB9 673 aaPredicted RBP23.74■■□□□ 1.39
CTSA-206ENST00000480961 DHX16O60231 1041 aaKnown RBP23.74■■□□□ 1.39
CTSA-206ENST00000480961 SLC25A27O95847 323 aa23.74■■□□□ 1.39
CTSA-206ENST00000480961 MORN1Q5T089 497 aa23.74■■□□□ 1.39
CTSA-206ENST00000480961 ADGRF4Q8IZF3 695 aa23.74■■□□□ 1.39
CTSA-206ENST00000480961 SH3TC2Q8TF17 1288 aa23.74■■□□□ 1.39
CTSA-206ENST00000480961 ABHD8Q96I13 439 aa23.74■■□□□ 1.39
CTSA-206ENST00000480961 NUDT12Q9BQG2 462 aa23.74■■□□□ 1.39
CTSA-206ENST00000480961 UPF3BQ9BZI7 483 aaKnown RBP23.74■■□□□ 1.39
CTSA-206ENST00000480961 SLC12A7Q9Y666 1083 aa23.74■■□□□ 1.39
CTSA-206ENST00000480961 IVNS1ABPQ9Y6Y0 642 aa23.74■■□□□ 1.39
CTSA-206ENST00000480961 ATP2A1O14983 1001 aa23.73■■□□□ 1.39
CTSA-206ENST00000480961 FDX1P10109 184 aa23.73■■□□□ 1.39
CTSA-206ENST00000480961 ELNP15502 786 aa23.73■■□□□ 1.39
CTSA-206ENST00000480961 SLC35G1Q2M3R5 365 aa23.73■■□□□ 1.39
CTSA-206ENST00000480961 ZSWIM6Q9HCJ5 1215 aa23.73■■□□□ 1.39
CTSA-206ENST00000480961 NAP1L2Q9ULW6 460 aaPredicted RBP23.73■■□□□ 1.39
CTSA-206ENST00000480961 CENPFP49454 3210 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms