RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 CCDC96Q2M329 555 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 SYDE2Q5VT97 1194 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 GALNT17Q6IS24 598 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 PPP1R18Q6NYC8 613 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 FASTKD5Q7L8L6 764 aaKnown RBP15.23■□□□□ 0.03
COL4A2-206ENST00000480609 SAPCD2Q86UD0 394 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 PRPF38AQ8NAV1 312 aaKnown RBP15.23■□□□□ 0.03
COL4A2-206ENST00000480609 ZNF784Q8NCA9 323 aaPredicted RBP15.23■□□□□ 0.03
COL4A2-206ENST00000480609 DDX11Q96FC9 970 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 ALG1Q9BT22 464 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 RANBP17Q9H2T7 1088 aaKnown RBP15.23■□□□□ 0.03
COL4A2-206ENST00000480609 ELP3Q9H9T3 547 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 BARHL2Q9NY43 387 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 TMOD4Q9NZQ9 345 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 TLL2Q9Y6L7 1015 aa15.23■□□□□ 0.03
COL4A2-206ENST00000480609 MYH6P13533 1939 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 RLFQ13129 1914 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 TESPA1A2RU30 521 aaPredicted RBP15.22■□□□□ 0.03
COL4A2-206ENST00000480609 USP17L15C9J2P7 530 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 USP17L13C9JLJ4 530 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 USP17L11C9JVI0 530 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 USP17L18D6R9N7 530 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 USP17L22D6RA61 530 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 USP17L17D6RBQ6 530 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 USP17L19D6RCP7 530 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 USP17L20D6RJB6 530 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 ATP2A1O14983 1001 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 YY1P25490 414 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 USP17L24Q0WX57 530 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 SNAPC2Q13487 334 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 FAM83BQ5T0W9 1011 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 TTBK2Q6IQ55 1244 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 DAGLBQ8NCG7 672 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 CCDC12Q8WUD4 166 aaPredicted RBP15.22■□□□□ 0.03
COL4A2-206ENST00000480609 OPTNQ96CV9 577 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 WNK4Q96J92 1243 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 C8orf76Q96K31 380 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 PPP1R9AQ9ULJ8 1098 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 ZDHHC9Q9Y397 364 aa15.22■□□□□ 0.03
COL4A2-206ENST00000480609 FRMPD2Q68DX3 1309 aaPredicted RBP15.21■□□□□ 0.03
COL4A2-206ENST00000480609 TRIM75PA6NK02 468 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 ZSCAN22P10073 491 aaPredicted RBP15.21■□□□□ 0.03
COL4A2-206ENST00000480609 GJA5P36382 358 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 OAZ1P54368 228 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 HMGCS2P54868 508 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 SPICE1Q8N0Z3 855 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 CMTR1Q8N1G2 835 aaKnown RBP15.21■□□□□ 0.03
COL4A2-206ENST00000480609 SPRYD3Q8NCJ5 442 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 CCDC148Q8NFR7 591 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 MS4A4AQ96JQ5 239 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 SLF1Q9BQI6 1058 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 PHF20Q9BVI0 1012 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 UBA5Q9GZZ9 404 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 GLT8D2Q9H1C3 349 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 ZCCHC17Q9NP64 241 aaKnown RBP15.21■□□□□ 0.03
COL4A2-206ENST00000480609 GPCPD1Q9NPB8 672 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 FOXD4L1Q9NU39 408 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 SEC63Q9UGP8 760 aaKnown RBP15.21■□□□□ 0.03
COL4A2-206ENST00000480609 PRR12Q9ULL5 1215 aa15.21■□□□□ 0.03
COL4A2-206ENST00000480609 PARP14Q460N5 1801 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 U2AF2P26368 475 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL4A2-206ENST00000480609 DSG3P32926 999 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 GTF2A2P52657 109 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 GHRHRQ02643 423 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 SPRYD7Q5W111 196 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 OTUD5Q96G74 571 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 PIGSQ96S52 555 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
COL4A2-206ENST00000480609 ZMYND12Q9H0C1 365 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 ZSCAN16Q9H4T2 348 aaPredicted RBP15.2■□□□□ 0.02
COL4A2-206ENST00000480609 RPAP3Q9H6T3 665 aaPredicted RBP15.2■□□□□ 0.02
COL4A2-206ENST00000480609 SLC38A10Q9HBR0 1119 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 HOXC10Q9NYD6 342 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 AGTPBP1Q9UPW5 1226 aa15.2■□□□□ 0.02
COL4A2-206ENST00000480609 STXBP3O00186 592 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 MMP1P03956 469 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 CETPP11597 493 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 CALML3P27482 149 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 HUNKP57058 714 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 PABPC4Q13310 644 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL4A2-206ENST00000480609 COG2Q14746 738 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 NPY5RQ15761 445 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 QRICH1Q2TAL8 776 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 KRT40Q6A162 431 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 WWC2Q6AWC2 1192 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 CCDC82Q8N4S0 544 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 SAMD3Q8N6K7 520 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 MB21D1Q8N884 522 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 GTF3C2Q8WUA4 911 aaPredicted RBP15.19■□□□□ 0.02
COL4A2-206ENST00000480609 SHISA4Q96DD7 197 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 AMNQ9BXJ7 453 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 FOXP1Q9H334 677 aaPredicted RBP15.19■□□□□ 0.02
COL4A2-206ENST00000480609 ZNF408Q9H9D4 720 aa15.19■□□□□ 0.02
COL4A2-206ENST00000480609 TMEM88BA6NKF7 163 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 F13A1P00488 732 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 SLC10A3P09131 477 aa15.18■□□□□ 0.02
COL4A2-206ENST00000480609 SLC16A2P36021 539 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms