RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 CPVLQ9H3G5 476 aa17.71■□□□□ 0.43
ABCF3-213ENST00000480539 CTDP1Q9Y5B0 961 aaPredicted RBP17.71■□□□□ 0.43
ABCF3-213ENST00000480539 CCDC69A6NI79 296 aa17.7■□□□□ 0.42
ABCF3-213ENST00000480539 HMGB1P09429 215 aaKnown RBP17.7■□□□□ 0.42
ABCF3-213ENST00000480539 ASPRV1Q53RT3 343 aa17.7■□□□□ 0.42
ABCF3-213ENST00000480539 GPATCH4Q5T3I0 446 aaKnown RBP17.7■□□□□ 0.42
ABCF3-213ENST00000480539 SYDE2Q5VT97 1194 aa17.7■□□□□ 0.42
ABCF3-213ENST00000480539 BLOC1S2Q6QNY1 142 aa17.7■□□□□ 0.42
ABCF3-213ENST00000480539 DHX32Q7L7V1 743 aaKnown RBP17.7■□□□□ 0.42
ABCF3-213ENST00000480539 CATIPQ7Z7H3 387 aa17.7■□□□□ 0.42
ABCF3-213ENST00000480539 RAB11FIP4Q86YS3 637 aa17.7■□□□□ 0.42
ABCF3-213ENST00000480539 CCAR1Q8IX12 1150 aaKnown RBP17.7■□□□□ 0.42
ABCF3-213ENST00000480539 MTA3Q9BTC8 594 aa17.7■□□□□ 0.42
ABCF3-213ENST00000480539 MOV10L1Q9BXT6 1211 aaKnown RBP17.7■□□□□ 0.42
ABCF3-213ENST00000480539 CWC22Q9HCG8 908 aaKnown RBP17.7■□□□□ 0.42
ABCF3-213ENST00000480539 PRR12Q9ULL5 1215 aa17.7■□□□□ 0.42
ABCF3-213ENST00000480539 ADAMTS5Q9UNA0 930 aa17.7■□□□□ 0.42
ABCF3-213ENST00000480539 WDR19Q8NEZ3 1342 aa17.7■□□□□ 0.42
ABCF3-213ENST00000480539 EIF5BO60841 1220 aaKnown RBP17.69■□□□□ 0.42
ABCF3-213ENST00000480539 ZBED4O75132 1171 aa17.69■□□□□ 0.42
ABCF3-213ENST00000480539 PARP1P09874 1014 aaKnown RBP17.69■□□□□ 0.42
ABCF3-213ENST00000480539 RPS6KB1P23443 525 aa17.69■□□□□ 0.42
ABCF3-213ENST00000480539 PSMA5P28066 241 aa17.69■□□□□ 0.42
ABCF3-213ENST00000480539 CCNA1P78396 465 aa17.69■□□□□ 0.42
ABCF3-213ENST00000480539 EXOSC10Q01780 885 aaKnown RBP17.69■□□□□ 0.42
ABCF3-213ENST00000480539 PRKCZQ05513 592 aa17.69■□□□□ 0.42
ABCF3-213ENST00000480539 SNRNP48Q6IEG0 339 aaKnown RBP17.69■□□□□ 0.42
ABCF3-213ENST00000480539 ZNF654Q8IZM8 581 aa17.69■□□□□ 0.42
ABCF3-213ENST00000480539 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
ABCF3-213ENST00000480539 MCOLN1Q9GZU1 580 aa17.69■□□□□ 0.42
ABCF3-213ENST00000480539 SLC38A10Q9HBR0 1119 aa17.69■□□□□ 0.42
ABCF3-213ENST00000480539 RAVER2Q9HCJ3 691 aaKnown RBP17.69■□□□□ 0.42
ABCF3-213ENST00000480539 ZNF214Q9UL59 606 aaPredicted RBP17.69■□□□□ 0.42
ABCF3-213ENST00000480539 PLA2G6O60733 806 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 TAL1P17542 331 aaPredicted RBP17.68■□□□□ 0.42
ABCF3-213ENST00000480539 RXRAP19793 462 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 MAPK4P31152 587 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 SLC4A3P48751 1232 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 FGD1P98174 961 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 GRM4Q14833 912 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 ARHGEF6Q15052 776 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 CCDC174Q6PII3 467 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 BTNL9Q6UXG8 535 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 GPR142Q7Z601 462 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 NCAPG2Q86XI2 1143 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 CPXCR1Q8N123 301 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 STAG2Q8N3U4 1231 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 UPF3BQ9BZI7 483 aaKnown RBP17.68■□□□□ 0.42
ABCF3-213ENST00000480539 UBA5Q9GZZ9 404 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 MAD2L2Q9UI95 211 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 GABRQQ9UN88 632 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 PLXNB2O15031 1838 aa17.68■□□□□ 0.42
ABCF3-213ENST00000480539 DDAH1O94760 285 aa17.67■□□□□ 0.42
ABCF3-213ENST00000480539 ERCC3P19447 782 aa17.67■□□□□ 0.42
ABCF3-213ENST00000480539 LIFRP42702 1097 aa17.67■□□□□ 0.42
ABCF3-213ENST00000480539 TROAPQ12815 778 aa17.67■□□□□ 0.42
ABCF3-213ENST00000480539 MICU3Q86XE3 530 aa17.67■□□□□ 0.42
ABCF3-213ENST00000480539 CCDC144CPQ8IYA2 1237 aa17.67■□□□□ 0.42
ABCF3-213ENST00000480539 COA7Q96BR5 231 aa17.67■□□□□ 0.42
ABCF3-213ENST00000480539 TEX13BQ9BXU2 312 aa17.67■□□□□ 0.42
ABCF3-213ENST00000480539 SRRDQ9UH36 339 aa17.67■□□□□ 0.42
ABCF3-213ENST00000480539 PTCH2Q9Y6C5 1203 aa17.67■□□□□ 0.42
ABCF3-213ENST00000480539 GNRH1P01148 92 aa17.66■□□□□ 0.42
ABCF3-213ENST00000480539 STAT3P40763 770 aa17.66■□□□□ 0.42
ABCF3-213ENST00000480539 APOA5Q6Q788 366 aa17.66■□□□□ 0.42
ABCF3-213ENST00000480539 Q6ZUG5 572 aa17.66■□□□□ 0.42
ABCF3-213ENST00000480539 PLEKHH3Q7Z736 793 aa17.66■□□□□ 0.42
ABCF3-213ENST00000480539 RIOX2Q8IUF8 465 aa17.66■□□□□ 0.42
ABCF3-213ENST00000480539 RANBP17Q9H2T7 1088 aaKnown RBP17.66■□□□□ 0.42
ABCF3-213ENST00000480539 HOMER2Q9NSB8 354 aa17.66■□□□□ 0.42
ABCF3-213ENST00000480539 PTPN22Q9Y2R2 807 aa17.66■□□□□ 0.42
ABCF3-213ENST00000480539 SLC12A7Q9Y666 1083 aa17.66■□□□□ 0.42
ABCF3-213ENST00000480539 ZNF536O15090 1300 aa17.66■□□□□ 0.42
ABCF3-213ENST00000480539 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 DHX16O60231 1041 aaKnown RBP17.65■□□□□ 0.42
ABCF3-213ENST00000480539 FBXO46Q6PJ61 603 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-213ENST00000480539 RUFY3Q7L099 469 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 SGMS1Q86VZ5 419 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 ADGRF4Q8IZF3 695 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 TNS4Q8IZW8 715 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 TMTC2Q8N394 836 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 SHCBP1Q8NEM2 672 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 BRF1Q92994 677 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 AGBL1Q96MI9 1066 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 ZSWIM6Q9HCJ5 1215 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 BRPF3Q9ULD4 1205 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 NAP1L2Q9ULW6 460 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-213ENST00000480539 CYP46A1Q9Y6A2 500 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 IVNS1ABPQ9Y6Y0 642 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 ZNF236Q9UL36 1845 aa17.65■□□□□ 0.42
ABCF3-213ENST00000480539 PALM3A6NDB9 673 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-213ENST00000480539 KLRF2D3W0D1 207 aa17.64■□□□□ 0.41
ABCF3-213ENST00000480539 ATP2A1O14983 1001 aa17.64■□□□□ 0.41
ABCF3-213ENST00000480539 SLC25A27O95847 323 aa17.64■□□□□ 0.41
ABCF3-213ENST00000480539 FDX1P10109 184 aa17.64■□□□□ 0.41
ABCF3-213ENST00000480539 HOXD10P28358 340 aa17.64■□□□□ 0.41
ABCF3-213ENST00000480539 FLT3LGP49771 235 aa17.64■□□□□ 0.41
ABCF3-213ENST00000480539 OAZ1P54368 228 aa17.64■□□□□ 0.41
ABCF3-213ENST00000480539 ANAPC15P60006 121 aa17.64■□□□□ 0.41
ABCF3-213ENST00000480539 APOBRQ0VD83 1088 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms