RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 OXER1Q8TDS5 423 aa15.03■□□□□ -0
USP42-206ENST00000479544 FUT8Q9BYC5 575 aa15.03■□□□□ -0
USP42-206ENST00000479544 ANKIB1Q9P2G1 1089 aa15.03■□□□□ -0
USP42-206ENST00000479544 MROH1Q8NDA8 1641 aa15.02■□□□□ -0
USP42-206ENST00000479544 MOCS3O95396 460 aa15.02■□□□□ -0
USP42-206ENST00000479544 ERCC5P28715 1186 aaPredicted RBP15.02■□□□□ -0
USP42-206ENST00000479544 REXO1L1PQ8IX06 675 aa15.02■□□□□ -0
USP42-206ENST00000479544 TCP11Q8WWU5 503 aa15.02■□□□□ -0
USP42-206ENST00000479544 PNKPQ96T60 521 aa15.02■□□□□ -0
USP42-206ENST00000479544 FDPSP14324 419 aaKnown RBP15.02□□□□□ -0.01
USP42-206ENST00000479544 PPP2R5AQ15172 486 aa15.02□□□□□ -0.01
USP42-206ENST00000479544 FAM212AQ96EL1 285 aa15.02□□□□□ -0.01
USP42-206ENST00000479544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.02□□□□□ -0.013e-6■■■■■ 84.9
USP42-206ENST00000479544 TNKSO95271 1327 aa15.02□□□□□ -0.01
USP42-206ENST00000479544 ZNF185O15231 689 aa15.02□□□□□ -0.01
USP42-206ENST00000479544 CALML3P27482 149 aa15.02□□□□□ -0.01
USP42-206ENST00000479544 NNTQ13423 1086 aa15.02□□□□□ -0.01
USP42-206ENST00000479544 DZIP3Q86Y13 1208 aaKnown RBP15.02□□□□□ -0.01
USP42-206ENST00000479544 TC2NQ8N9U0 490 aa15.02□□□□□ -0.01
USP42-206ENST00000479544 TUBGCP2Q9BSJ2 902 aa15.02□□□□□ -0.01
USP42-206ENST00000479544 EIF4E1BA6NMX2 242 aaKnown RBP15.01□□□□□ -0.01
USP42-206ENST00000479544 PPP1R12BO60237 982 aaPredicted RBP15.01□□□□□ -0.01
USP42-206ENST00000479544 CCNT1O60563 726 aaKnown RBP15.01□□□□□ -0.01
USP42-206ENST00000479544 RPN1P04843 607 aaKnown RBP15.01□□□□□ -0.01
USP42-206ENST00000479544 MCTP2Q6DN12 878 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 SH2D3CQ8N5H7 860 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 TRIML1Q8N9V2 468 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 TRIM58Q8NG06 486 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 FBF1Q8TES7 1133 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 FERMT2Q96AC1 680 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.01□□□□□ -0.01
USP42-206ENST00000479544 ADAMTS13Q76LX8 1427 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 SALL3Q9BXA9 1300 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 FTCDO95954 541 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 GJC1P36383 396 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 GRIN1Q05586 938 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 CCDC6Q16204 474 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 INF2Q27J81 1249 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 TEX13AQ9BXU3 409 aaPredicted RBP15.01□□□□□ -0.01
USP42-206ENST00000479544 PPP1R12CQ9BZL4 782 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 TSGA10Q9BZW7 698 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 A0A1W2PRG0 241 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 FXR1P51114 621 aaKnown RBP eCLIP15.01□□□□□ -0.01
USP42-206ENST00000479544 CCDC170Q8IYT3 715 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 SLC24A3Q9HC58 644 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 DENND2AQ9ULE3 1009 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 ROBO1Q9Y6N7 1651 aa15.01□□□□□ -0.01
USP42-206ENST00000479544 HEXIM1O94992 359 aaKnown RBP15□□□□□ -0.01
USP42-206ENST00000479544 SMCR8Q8TEV9 937 aaPredicted RBP15□□□□□ -0.01
USP42-206ENST00000479544 CRNKL1Q9BZJ0 848 aaKnown RBP15□□□□□ -0.01
USP42-206ENST00000479544 ODF2LQ9ULJ1 636 aa15□□□□□ -0.01
USP42-206ENST00000479544 NFU1Q9UMS0 254 aa15□□□□□ -0.01
USP42-206ENST00000479544 PHLPP1O60346 1717 aa15□□□□□ -0.01
USP42-206ENST00000479544 SETBP1Q9Y6X0 1596 aa15□□□□□ -0.01
USP42-206ENST00000479544 GCKP35557 465 aa15□□□□□ -0.01
USP42-206ENST00000479544 RESP18Q5W5W9 173 aa15□□□□□ -0.01
USP42-206ENST00000479544 CCDC24Q8N4L8 307 aa15□□□□□ -0.01
USP42-206ENST00000479544 PANX2Q96RD6 677 aa15□□□□□ -0.01
USP42-206ENST00000479544 PLS1Q14651 629 aa15□□□□□ -0.01
USP42-206ENST00000479544 GRIPAP1Q4V328 841 aa15□□□□□ -0.01
USP42-206ENST00000479544 KRT79Q5XKE5 535 aa15□□□□□ -0.01
USP42-206ENST00000479544 GIGYF2Q6Y7W6 1299 aaKnown RBP15□□□□□ -0.01
USP42-206ENST00000479544 CYB5R4Q7L1T6 521 aa15□□□□□ -0.01
USP42-206ENST00000479544 KRT26Q7Z3Y9 468 aa15□□□□□ -0.01
USP42-206ENST00000479544 RPAINQ86UA6 219 aa15□□□□□ -0.01
USP42-206ENST00000479544 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15□□□□□ -0.01
USP42-206ENST00000479544 CYP2D7A0A087X1C5 515 aa15□□□□□ -0.01
USP42-206ENST00000479544 DNM2P50570 870 aa15□□□□□ -0.01
USP42-206ENST00000479544 KLHL30Q0D2K2 578 aa15□□□□□ -0.01
USP42-206ENST00000479544 SLC9C1Q4G0N8 1177 aa15□□□□□ -0.01
USP42-206ENST00000479544 PAGE5Q96GU1 130 aa15□□□□□ -0.01
USP42-206ENST00000479544 SMARCAL1Q9NZC9 954 aa15□□□□□ -0.01
USP42-206ENST00000479544 HYOU1Q9Y4L1 999 aa15□□□□□ -0.01
USP42-206ENST00000479544 MROH7-TTC4A0A0A0MT08 1334 aa15□□□□□ -0.01
USP42-206ENST00000479544 USP17L12C9JPN9 530 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 USP17L21D6R901 530 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 EXOC5O00471 708 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 ATP1A1P05023 1023 aaKnown RBP14.99□□□□□ -0.01
USP42-206ENST00000479544 GUCY1A2P33402 732 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 EIF6P56537 245 aaKnown RBP14.99□□□□□ -0.01
USP42-206ENST00000479544 DNAJC10Q8IXB1 793 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 SPATA5Q8NB90 893 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 N4BP2L2Q92802 583 aaPredicted RBP14.99□□□□□ -0.01
USP42-206ENST00000479544 RPGRIP1Q96KN7 1286 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 GSDMAQ96QA5 445 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 RPS6KA1Q15418 735 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 SV2BQ7L1I2 683 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 TBC1D10CQ8IV04 446 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 CACNA2D3Q8IZS8 1091 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 SYNE4Q8N205 404 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 MMS19Q96T76 1030 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 RTL9Q8NET4 1388 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 FAM205CA6NFA0 338 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 BCAMP50895 628 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 TRIM68Q6AZZ1 485 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 TAOK3Q9H2K8 898 aa14.99□□□□□ -0.01
USP42-206ENST00000479544 AATFQ9NY61 560 aaKnown RBP eCLIP14.99□□□□□ -0.01
USP42-206ENST00000479544 GOLGA8KD6RF30 607 aa14.98□□□□□ -0.01
USP42-206ENST00000479544 H7C1D1 291 aa14.98□□□□□ -0.01
USP42-206ENST00000479544 MMP1P03956 469 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms