RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 RIMBP3CA6NJZ7 1639 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 RIMBP3BA6NNM3 1639 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 SCRIBQ14160 1630 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 RIMBP3Q9UFD9 1639 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 ZCCHC6Q5VYS8 1495 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 GABRDO14764 452 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 BRINP1O60477 761 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 CAND2O75155 1236 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 APBA3O96018 575 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 BPIP17213 487 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 GFRA1P56159 465 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 TMPRSS15P98073 1019 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 PIN1Q13526 163 aaPredicted RBP9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 CFAP100Q494V2 611 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 GTF2IRD2BQ6EKJ0 949 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 GTF2IRD2Q86UP8 949 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 PTPRN2Q92932 1015 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 ARNT2Q9HBZ2 717 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 AASDHPPTQ9NRN7 309 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 AP4E1Q9UPM8 1137 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 ASXL2Q76L83 1435 aa9.72□□□□□ -0.85
GAPVD1-217ENST00000479511 EIF3JO75822 258 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 WISP1O95388 367 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 ZNF445P59923 1031 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 COL9A3Q14050 684 aaPredicted RBP9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 TREML4Q6UXN2 200 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 MAP4K3Q8IVH8 894 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 CNTD1Q8N815 330 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 TMEM145Q8NBT3 493 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 DNAJB8Q8NHS0 232 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 PI4K2BQ8TCG2 481 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 C1orf159Q96HA4 380 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 FOXQ1Q9C009 403 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 PUS7LQ9H0K6 701 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 ATXN3LQ9H3M9 355 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 CHST12Q9NRB3 414 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 NOB1Q9ULX3 412 aaKnown RBP9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 TRAF6Q9Y4K3 522 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 DCAF1Q9Y4B6 1507 aa9.71□□□□□ -0.86
GAPVD1-217ENST00000479511 PRPF3O43395 683 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 ADH5P11766 374 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 ITGA4P13612 1032 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 CYP4F3Q08477 520 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 PRSS53Q2L4Q9 553 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 KCT2Q8NC54 265 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 KCTD13Q8WZ19 329 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 USP7Q93009 1102 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 CHMP4CQ96CF2 233 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 MAGEB10Q96LZ2 347 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 KREMEN1Q96MU8 473 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 TTC1Q99614 292 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 CRTAC1Q9NQ79 661 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 TNKSO95271 1327 aa9.7□□□□□ -0.86
GAPVD1-217ENST00000479511 CRTAMO95727 393 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 NID1P14543 1247 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 MAP4K2Q12851 820 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 DUOXA2Q1HG44 320 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 RNFT1Q5M7Z0 435 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 DENND5AQ6IQ26 1287 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 POMZP3Q6PJE2 187 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 TMED8Q6PL24 325 aaPredicted RBP9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 ZBTB46Q86UZ6 589 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 PASD1Q8IV76 773 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 IFT22Q9H7X7 185 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 CEP131Q9UPN4 1083 aa9.69□□□□□ -0.86
GAPVD1-217ENST00000479511 KRBA1A5PL33 1030 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 M0R2C6 588 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 RNGTTO60942 597 aaKnown RBP9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 KRT18P05783 430 aaKnown RBP9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 DRD2P14416 443 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 KCNA6P17658 529 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 KCNJ6P48051 423 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 PPP2R5DQ14738 602 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 SLC35F1Q5T1Q4 408 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 SYCP2LQ5T4T6 812 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 PIK3R6Q5UE93 754 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 ABHD17CQ6PCB6 329 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 CHSY3Q70JA7 882 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 ARMCX6Q7L4S7 300 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 MAMDC2Q7Z304 686 aaPredicted RBP9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 ACDQ96AP0 544 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 NKX2-4Q9H2Z4 354 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 GSX1Q9H4S2 264 aaPredicted RBP9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 PRDM6Q9NQX0 595 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 PCDHA9Q9Y5H5 950 aa9.68□□□□□ -0.86
GAPVD1-217ENST00000479511 A0A087WZG4 1122 aa9.67□□□□□ -0.86
GAPVD1-217ENST00000479511 MEGF11A6BM72 1044 aa9.67□□□□□ -0.86
GAPVD1-217ENST00000479511 SNRPB2P08579 225 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-217ENST00000479511 SYDE2Q5VT97 1194 aa9.67□□□□□ -0.86
GAPVD1-217ENST00000479511 KIAA1211Q6ZU35 1233 aa9.67□□□□□ -0.86
GAPVD1-217ENST00000479511 TCEAL8Q8IYN2 117 aa9.67□□□□□ -0.86
GAPVD1-217ENST00000479511 CRACR2BQ8N4Y2 399 aaPredicted RBP9.67□□□□□ -0.86
GAPVD1-217ENST00000479511 OR2W6PQ8NHA6 318 aa9.67□□□□□ -0.86
GAPVD1-217ENST00000479511 NOL6Q9H6R4 1146 aaKnown RBP9.67□□□□□ -0.86
GAPVD1-217ENST00000479511 FBXL21Q9UKT6 434 aa9.67□□□□□ -0.86
GAPVD1-217ENST00000479511 ZNF891A8MT65 544 aaPredicted RBP9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 ZEB2O60315 1214 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 WFS1O76024 890 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 HOXC12P31275 282 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 FLT3P36888 993 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms