RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 NUP88Q99567 741 aaPredicted RBP18.17■□□□□ 0.5
C9orf3-217ENST00000479161 ZBED4O75132 1171 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 PTPREP23469 700 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 GRK4P32298 578 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 STAT3P40763 770 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 SART3Q15020 963 aaKnown RBP18.16■□□□□ 0.5
C9orf3-217ENST00000479161 CREB3L3Q68CJ9 461 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 KCNB2Q92953 911 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 ZNF333Q96JL9 665 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 TEX13BQ9BXU2 312 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 PNMA2Q9UL42 364 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 GABRQQ9UN88 632 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 RBBP6Q7Z6E9 1792 aaKnown RBP18.16■□□□□ 0.5
C9orf3-217ENST00000479161 TNKSO95271 1327 aa18.16■□□□□ 0.5
C9orf3-217ENST00000479161 TMEM232C9JQI7 657 aa18.15■□□□□ 0.5
C9orf3-217ENST00000479161 EIF5BO60841 1220 aaKnown RBP18.15■□□□□ 0.5
C9orf3-217ENST00000479161 ZNF543Q08ER8 600 aa18.15■□□□□ 0.5
C9orf3-217ENST00000479161 GRB14Q14449 540 aa18.15■□□□□ 0.5
C9orf3-217ENST00000479161 STOX1Q6ZVD7 989 aa18.15■□□□□ 0.5
C9orf3-217ENST00000479161 MB21D2Q8IYB1 491 aaPredicted RBP18.15■□□□□ 0.5
C9orf3-217ENST00000479161 PNMA1Q8ND90 353 aa18.15■□□□□ 0.5
C9orf3-217ENST00000479161 KAT14Q9H8E8 782 aa18.15■□□□□ 0.5
C9orf3-217ENST00000479161 IVNS1ABPQ9Y6Y0 642 aa18.15■□□□□ 0.5
C9orf3-217ENST00000479161 ADCY3O60266 1144 aa18.14■□□□□ 0.49
C9orf3-217ENST00000479161 PEX10O60683 326 aa18.14■□□□□ 0.49
C9orf3-217ENST00000479161 ERCC3P19447 782 aa18.14■□□□□ 0.49
C9orf3-217ENST00000479161 RGS2P41220 211 aa18.14■□□□□ 0.49
C9orf3-217ENST00000479161 KRT32Q14532 448 aa18.14■□□□□ 0.49
C9orf3-217ENST00000479161 CYB5R4Q7L1T6 521 aa18.14■□□□□ 0.49
C9orf3-217ENST00000479161 TMTC2Q8N394 836 aa18.14■□□□□ 0.49
C9orf3-217ENST00000479161 ZKSCAN3Q9BRR0 538 aa18.14■□□□□ 0.49
C9orf3-217ENST00000479161 WDR19Q8NEZ3 1342 aa18.14■□□□□ 0.49
C9orf3-217ENST00000479161 ERICH2A1L162 156 aa18.13■□□□□ 0.49
C9orf3-217ENST00000479161 ZKSCAN1P17029 563 aaPredicted RBP18.13■□□□□ 0.49
C9orf3-217ENST00000479161 MCM5P33992 734 aa18.13■□□□□ 0.49
C9orf3-217ENST00000479161 MAP2K5Q13163 448 aa18.13■□□□□ 0.49
C9orf3-217ENST00000479161 ASPRV1Q53RT3 343 aa18.13■□□□□ 0.49
C9orf3-217ENST00000479161 IFIT1BQ5T764 474 aaKnown RBP18.13■□□□□ 0.49
C9orf3-217ENST00000479161 IGDCC4Q8TDY8 1250 aa18.13■□□□□ 0.49
C9orf3-217ENST00000479161 KIFC2Q96AC6 838 aa18.13■□□□□ 0.49
C9orf3-217ENST00000479161 TMEM87BQ96K49 555 aa18.13■□□□□ 0.49
C9orf3-217ENST00000479161 MAP3K14Q99558 947 aa18.13■□□□□ 0.49
C9orf3-217ENST00000479161 MAF1Q9H063 256 aa18.13■□□□□ 0.49
C9orf3-217ENST00000479161 TAF6LQ9Y6J9 622 aa18.13■□□□□ 0.49
C9orf3-217ENST00000479161 IGHA2P01877 340 aa18.12■□□□□ 0.49
C9orf3-217ENST00000479161 RGS19P49795 217 aa18.12■□□□□ 0.49
C9orf3-217ENST00000479161 UBXN2AP68543 259 aa18.12■□□□□ 0.49
C9orf3-217ENST00000479161 TKFCQ3LXA3 575 aa18.12■□□□□ 0.49
C9orf3-217ENST00000479161 KCTD1Q719H9 257 aa18.12■□□□□ 0.49
C9orf3-217ENST00000479161 CHST13Q8NET6 341 aa18.12■□□□□ 0.49
C9orf3-217ENST00000479161 APBA2Q99767 749 aa18.12■□□□□ 0.49
C9orf3-217ENST00000479161 SLC5A4Q9NY91 659 aa18.12■□□□□ 0.49
C9orf3-217ENST00000479161 FBXO40Q9UH90 709 aa18.12■□□□□ 0.49
C9orf3-217ENST00000479161 PRR12Q9ULL5 1215 aa18.12■□□□□ 0.49
C9orf3-217ENST00000479161 DIS3Q9Y2L1 958 aaKnown RBP18.12■□□□□ 0.49
C9orf3-217ENST00000479161 CCDC85CA6NKD9 419 aa18.11■□□□□ 0.49
C9orf3-217ENST00000479161 IFIT3O14879 490 aaKnown RBP18.11■□□□□ 0.49
C9orf3-217ENST00000479161 HMGCRP04035 888 aa18.11■□□□□ 0.49
C9orf3-217ENST00000479161 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
C9orf3-217ENST00000479161 FCER1AP12319 257 aa18.11■□□□□ 0.49
C9orf3-217ENST00000479161 HSPA4P34932 840 aa18.11■□□□□ 0.49
C9orf3-217ENST00000479161 LIFRP42702 1097 aa18.11■□□□□ 0.49
C9orf3-217ENST00000479161 PLS1Q14651 629 aa18.11■□□□□ 0.49
C9orf3-217ENST00000479161 RANBP17Q9H2T7 1088 aaKnown RBP18.11■□□□□ 0.49
C9orf3-217ENST00000479161 CWC22Q9HCG8 908 aaKnown RBP18.11■□□□□ 0.49
C9orf3-217ENST00000479161 CTDP1Q9Y5B0 961 aaPredicted RBP18.11■□□□□ 0.49
C9orf3-217ENST00000479161 ZNF536O15090 1300 aa18.1■□□□□ 0.49
C9orf3-217ENST00000479161 ANTXR2P58335 489 aa18.1■□□□□ 0.49
C9orf3-217ENST00000479161 WTAPQ15007 396 aa18.1■□□□□ 0.49
C9orf3-217ENST00000479161 CCDC96Q2M329 555 aa18.1■□□□□ 0.49
C9orf3-217ENST00000479161 SYDE2Q5VT97 1194 aa18.1■□□□□ 0.49
C9orf3-217ENST00000479161 SNRNP48Q6IEG0 339 aaKnown RBP18.1■□□□□ 0.49
C9orf3-217ENST00000479161 NCAPG2Q86XI2 1143 aa18.1■□□□□ 0.49
C9orf3-217ENST00000479161 ICAM1P05362 532 aa18.09■□□□□ 0.49
C9orf3-217ENST00000479161 ADORA2AP29274 412 aa18.09■□□□□ 0.49
C9orf3-217ENST00000479161 TROAPQ12815 778 aa18.09■□□□□ 0.49
C9orf3-217ENST00000479161 IKQ13123 557 aaPredicted RBP18.09■□□□□ 0.49
C9orf3-217ENST00000479161 MAP3K21Q5TCX8 1036 aa18.09■□□□□ 0.49
C9orf3-217ENST00000479161 OLFML2BQ68BL8 750 aa18.09■□□□□ 0.49
C9orf3-217ENST00000479161 SH3TC2Q8TF17 1288 aa18.09■□□□□ 0.49
C9orf3-217ENST00000479161 NEK1Q96PY6 1258 aa18.09■□□□□ 0.49
C9orf3-217ENST00000479161 PLXNA1Q9UIW2 1896 aa18.08■□□□□ 0.49
C9orf3-217ENST00000479161 PRC1O43663 620 aa18.08■□□□□ 0.48
C9orf3-217ENST00000479161 PARP1P09874 1014 aaKnown RBP18.08■□□□□ 0.48
C9orf3-217ENST00000479161 TMEM67Q5HYA8 995 aa18.08■□□□□ 0.48
C9orf3-217ENST00000479161 WDR78Q5VTH9 848 aa18.08■□□□□ 0.48
C9orf3-217ENST00000479161 TTBK2Q6IQ55 1244 aa18.08■□□□□ 0.48
C9orf3-217ENST00000479161 DHX32Q7L7V1 743 aaKnown RBP18.08■□□□□ 0.48
C9orf3-217ENST00000479161 FBXL16Q8N461 479 aa18.08■□□□□ 0.48
C9orf3-217ENST00000479161 MSL3Q8N5Y2 521 aaKnown RBP18.08■□□□□ 0.48
C9orf3-217ENST00000479161 TMEM106CQ9BVX2 250 aa18.08■□□□□ 0.48
C9orf3-217ENST00000479161 BRCA2P51587 3418 aa18.08■□□□□ 0.48
C9orf3-217ENST00000479161 SMCHD1A6NHR9 2005 aa18.08■□□□□ 0.48
C9orf3-217ENST00000479161 PDE4DIPQ5VU43 2346 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 DNAJC25-GNG10A0A024R161 153 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 PALM3A6NDB9 673 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-217ENST00000479161 ECM2O94769 699 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-217ENST00000479161 GJB1P08034 283 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 CYP2B6P20813 491 aa18.07■□□□□ 0.48
C9orf3-217ENST00000479161 SMARCA1P28370 1054 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms