RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 IRF5Q13568 498 aa5.08□□□□□ -1.6
POLR2B-208ENST00000478188 Q3C1V9 767 aa5.08□□□□□ -1.6
POLR2B-208ENST00000478188 MORN1Q5T089 497 aa5.08□□□□□ -1.6
POLR2B-208ENST00000478188 CRACR2BQ8N4Y2 399 aaPredicted RBP5.08□□□□□ -1.6
POLR2B-208ENST00000478188 MKL1Q969V6 931 aa5.08□□□□□ -1.6
POLR2B-208ENST00000478188 FSD1Q9BTV5 496 aa5.08□□□□□ -1.6
POLR2B-208ENST00000478188 TRIM17Q9Y577 477 aa5.08□□□□□ -1.6
POLR2B-208ENST00000478188 CCDC171Q6TFL3 1326 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 GPR37O15354 613 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 ORC4O43929 436 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 POLR3DP05423 398 aaPredicted RBP5.07□□□□□ -1.6
POLR2B-208ENST00000478188 HSPD1P10809 573 aaKnown RBP5.07□□□□□ -1.6
POLR2B-208ENST00000478188 PRMT2P55345 433 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 PRKCZQ05513 592 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 TBC1D10CQ8IV04 446 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 EFCC1Q9HA90 598 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 IL17RBQ9NRM6 502 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 PNMA3Q9UL41 463 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 SYNPO2Q9UMS6 1093 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 MYPNQ86TC9 1320 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 GCLCP48506 637 aaPredicted RBP5.07□□□□□ -1.6
POLR2B-208ENST00000478188 SLC4A3P48751 1232 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 PPARAQ07869 468 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 MAP3K21Q5TCX8 1036 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 B4GALNT3Q6L9W6 998 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 NEDD1Q8NHV4 660 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 TATDN2Q93075 761 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 CCDC17Q96LX7 622 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 PORCNQ9H237 461 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 VCPKMTQ9H867 229 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 INCENPQ9NQS7 918 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 NYAP2Q9P242 653 aa5.07□□□□□ -1.6
POLR2B-208ENST00000478188 MCM3APO60318 1980 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 EEF2P13639 858 aaKnown RBP5.06□□□□□ -1.6
POLR2B-208ENST00000478188 PSMC4P43686 418 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 ERVK-9P63128 1117 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 ERVK-24P63145 666 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 MCMDC2Q4G0Z9 681 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 RCSD1Q6JBY9 416 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 RASGRP2Q7LDG7 609 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 SKAP1Q86WV1 359 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 ANKRD13CQ8N6S4 541 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 GMCL1P1Q8NEA9 526 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 RPAP3Q9H6T3 665 aaPredicted RBP5.06□□□□□ -1.6
POLR2B-208ENST00000478188 RBM27Q9P2N5 1060 aaKnown RBP5.06□□□□□ -1.6
POLR2B-208ENST00000478188 NEDD4P46934 1319 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 MYH6P13533 1939 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 USP17L15C9J2P7 530 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 USP17L13C9JLJ4 530 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 USP17L11C9JVI0 530 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 USP17L18D6R9N7 530 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 USP17L22D6RA61 530 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 USP17L17D6RBQ6 530 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 USP17L19D6RCP7 530 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 USP17L20D6RJB6 530 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 FGAP02671 866 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 CAPN2P17655 700 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 USP14P54578 494 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 ICA1Q05084 483 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 USP17L24Q0WX57 530 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 RAB3GAP1Q15042 981 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 GTF3C2Q8WUA4 911 aaPredicted RBP5.06□□□□□ -1.6
POLR2B-208ENST00000478188 CEP95Q96GE4 821 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 MTMR4Q9NYA4 1195 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 TAF6LQ9Y6J9 622 aa5.06□□□□□ -1.6
POLR2B-208ENST00000478188 SMAPO00193 183 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 WDR46O15213 610 aaKnown RBP5.05□□□□□ -1.6
POLR2B-208ENST00000478188 CTDSPL2Q05D32 466 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 COL9A3Q14050 684 aaPredicted RBP5.05□□□□□ -1.6
POLR2B-208ENST00000478188 GRB14Q14449 540 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 HIC1Q14526 733 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 PXYLP1Q8TE99 480 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 STAG1Q8WVM7 1258 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 LPAR1Q92633 364 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 PAK6Q9NQU5 681 aaPredicted RBP5.05□□□□□ -1.6
POLR2B-208ENST00000478188 TCP11L1Q9NUJ3 509 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 ZNF214Q9UL59 606 aaPredicted RBP5.05□□□□□ -1.6
POLR2B-208ENST00000478188 RAD50Q92878 1312 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 PRDM1O75626 825 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 NDUFB10O96000 172 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 HOXC6P09630 235 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 CHMLP26374 656 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 FCGRTP55899 365 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 SOX10P56693 466 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 TRIM32Q13049 653 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 PABPC4Q13310 644 aaKnown RBP eCLIP5.05□□□□□ -1.68e-8■■■□□ 17.7
POLR2B-208ENST00000478188 MTFR1Q15390 333 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 SLC17A8Q8NDX2 589 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 SH3TC2Q8TF17 1288 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 TRIB2Q92519 343 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 FGD4Q96M96 766 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 DSCC1Q9BVC3 393 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 KANSL2Q9H9L4 492 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 FLRT1Q9NZU1 646 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 RABGAP1Q9Y3P9 1069 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 ZNF536O15090 1300 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 ATP2A1O14983 1001 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 NMT2O60551 498 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 SNHG28P0DPA3 235 aa5.05□□□□□ -1.6
POLR2B-208ENST00000478188 FLT3LGP49771 235 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms