RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 USP17L2Q6R6M4 530 aa13.44□□□□□ -0.26
CBWD3-206ENST00000478048 TMEM87BQ96K49 555 aa13.44□□□□□ -0.26
CBWD3-206ENST00000478048 TESPA1A2RU30 521 aaPredicted RBP13.43□□□□□ -0.26
CBWD3-206ENST00000478048 BTBD19C9JJ37 291 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 IGF2BP3O00425 579 aaKnown RBP eCLIP13.43□□□□□ -0.26
CBWD3-206ENST00000478048 USP14P54578 494 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 GPAT2Q6NUI2 795 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 Q6ZUG5 572 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 FAM43AQ8N2R8 423 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 PNMA1Q8ND90 353 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 C12orf42Q96LP6 360 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 NUP88Q99567 741 aaPredicted RBP13.43□□□□□ -0.26
CBWD3-206ENST00000478048 MTA3Q9BTC8 594 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 SH2D4AQ9H788 454 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 KAT14Q9H8E8 782 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 TMOD4Q9NZQ9 345 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 CYP46A1Q9Y6A2 500 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 WDR19Q8NEZ3 1342 aa13.43□□□□□ -0.26
CBWD3-206ENST00000478048 VCAM1P19320 739 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 SLFN13Q68D06 897 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 PROCA1Q8NCQ7 364 aaPredicted RBP13.42□□□□□ -0.26
CBWD3-206ENST00000478048 GMCL1P1Q8NEA9 526 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 GOPCQ9HD26 462 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 MAP2K2P36507 400 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 LIFRP42702 1097 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 TM4SF4P48230 202 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 TOB2Q14106 344 aaPredicted RBP13.42□□□□□ -0.26
CBWD3-206ENST00000478048 FASTKD5Q7L8L6 764 aaKnown RBP13.42□□□□□ -0.26
CBWD3-206ENST00000478048 RAB11FIP4Q86YS3 637 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 BRF1Q92994 677 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 MYL10Q9BUA6 226 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 PDRG1Q9NUG6 133 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 BRPF3Q9ULD4 1205 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 SYNPO2Q9UMS6 1093 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 AGTPBP1Q9UPW5 1226 aa13.42□□□□□ -0.26
CBWD3-206ENST00000478048 THSD7BQ9C0I4 1608 aa13.41□□□□□ -0.26
CBWD3-206ENST00000478048 NEK4P51957 841 aa13.41□□□□□ -0.26
CBWD3-206ENST00000478048 FGD1P98174 961 aa13.41□□□□□ -0.26
CBWD3-206ENST00000478048 APOBRQ0VD83 1088 aa13.41□□□□□ -0.26
CBWD3-206ENST00000478048 SREBF2Q12772 1141 aa13.41□□□□□ -0.26
CBWD3-206ENST00000478048 FAM83BQ5T0W9 1011 aa13.41□□□□□ -0.26
CBWD3-206ENST00000478048 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
CBWD3-206ENST00000478048 LPAR1Q92633 364 aa13.41□□□□□ -0.26
CBWD3-206ENST00000478048 ZDHHC16Q969W1 377 aa13.41□□□□□ -0.26
CBWD3-206ENST00000478048 AGXT2Q9BYV1 514 aa13.41□□□□□ -0.26
CBWD3-206ENST00000478048 RPAP3Q9H6T3 665 aaPredicted RBP13.41□□□□□ -0.26
CBWD3-206ENST00000478048 PDHXO00330 501 aa13.4□□□□□ -0.26
CBWD3-206ENST00000478048 PDHBP11177 359 aa13.4□□□□□ -0.26
CBWD3-206ENST00000478048 RXRAP19793 462 aa13.4□□□□□ -0.26
CBWD3-206ENST00000478048 INHBEP58166 350 aa13.4□□□□□ -0.26
CBWD3-206ENST00000478048 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
CBWD3-206ENST00000478048 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
CBWD3-206ENST00000478048 FRMPD2Q68DX3 1309 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-206ENST00000478048 CCDC69A6NI79 296 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 WDR46O15213 610 aaKnown RBP13.39□□□□□ -0.27
CBWD3-206ENST00000478048 SNHG28P0DPA3 235 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 SLC1A4P43007 532 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 TROAPQ12815 778 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 CATSPERGQ6ZRH7 1159 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 KCTD1Q719H9 257 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 ANKRD23Q86SG2 305 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 FBXL16Q8N461 479 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 GMCL1Q96IK5 515 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 TANGO6Q9C0B7 1094 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 FBXO28Q9NVF7 368 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 RLFQ13129 1914 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 KLF18A0A0U1RQI7 1052 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 GOLGA8HP0CJ92 632 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 CYP2C8P10632 490 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 BMP3P12645 472 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 HOXA7P31268 230 aaPredicted RBP13.39□□□□□ -0.27
CBWD3-206ENST00000478048 AK2P54819 239 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 TTBK2Q6IQ55 1244 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 APOA5Q6Q788 366 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 CATIPQ7Z7H3 387 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 STAG2Q8N3U4 1231 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 NUP133Q8WUM0 1156 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 DCAF4Q8WV16 495 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 ISY1Q9ULR0 285 aaKnown RBP13.39□□□□□ -0.27
CBWD3-206ENST00000478048 SLC12A7Q9Y666 1083 aa13.39□□□□□ -0.27
CBWD3-206ENST00000478048 PARP14Q460N5 1801 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 BAZ2BQ9UIF8 2168 aaKnown RBP13.38□□□□□ -0.27
CBWD3-206ENST00000478048 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 TMEM232C9JQI7 657 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 ZNF543Q08ER8 600 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 NOL8Q76FK4 1167 aaKnown RBP13.38□□□□□ -0.27
CBWD3-206ENST00000478048 MICU3Q86XE3 530 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 CCDC144CPQ8IYA2 1237 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 P2RX7Q99572 595 aaKnown RBP13.38□□□□□ -0.27
CBWD3-206ENST00000478048 ASCC2Q9H1I8 757 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms