RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 TCFL5Q9UL49 500 aa6.59□□□□□ -1.35
NCKAP1-204ENST00000477988 SSU72P8A0A1W2PR75 194 aa6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 TMEM82A0PJX8 343 aa6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 C1QTNF3-AMACRE9PGA6 284 aa6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 GRIN3BO60391 1043 aa6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 GBP1P32455 592 aa6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 TMEM62Q0P6H9 643 aa6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 TCTN2Q96GX1 697 aa6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 DUSP9Q99956 384 aaKnown RBP6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 FOXP3Q9BZS1 431 aa6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 KLHL3Q9UH77 587 aa6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 IVNS1ABPQ9Y6Y0 642 aa6.58□□□□□ -1.36
NCKAP1-204ENST00000477988 IRS2Q9Y4H2 1338 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 RGS13O14921 159 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 HTR3BO95264 441 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 FSHBP01225 129 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 MPOP05164 745 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 IGFBP6P24592 240 aaPredicted RBP6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 RTP1P59025 263 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 GALNT18Q6P9A2 607 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 TMC6Q7Z403 805 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 FERMT3Q86UX7 667 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 KIF2CQ99661 725 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 TNFRSF10DQ9UBN6 386 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 USP31Q70CQ4 1352 aa6.57□□□□□ -1.36
NCKAP1-204ENST00000477988 F13A1P00488 732 aa6.56□□□□□ -1.36
NCKAP1-204ENST00000477988 ENDOUP21128 410 aaKnown RBP6.56□□□□□ -1.36
NCKAP1-204ENST00000477988 ARL4AP40617 200 aa6.56□□□□□ -1.36
NCKAP1-204ENST00000477988 KCNA1Q09470 495 aa6.56□□□□□ -1.36
NCKAP1-204ENST00000477988 LAPTM5Q13571 262 aa6.56□□□□□ -1.36
NCKAP1-204ENST00000477988 VWA3BQ502W6 1294 aa6.56□□□□□ -1.36
NCKAP1-204ENST00000477988 WTIPA6NIX2 430 aaPredicted RBP6.55□□□□□ -1.36
NCKAP1-204ENST00000477988 NCKAP1LP55160 1127 aa6.55□□□□□ -1.36
NCKAP1-204ENST00000477988 MLECQ14165 292 aa6.55□□□□□ -1.36
NCKAP1-204ENST00000477988 NLGN1Q8N2Q7 840 aa6.55□□□□□ -1.36
NCKAP1-204ENST00000477988 FCRL2Q96LA5 508 aaPredicted RBP6.55□□□□□ -1.36
NCKAP1-204ENST00000477988 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.55□□□□□ -1.36
NCKAP1-204ENST00000477988 SMPD4Q9NXE4 827 aa6.55□□□□□ -1.36
NCKAP1-204ENST00000477988 POLR3KQ9Y2Y1 108 aaPredicted RBP6.55□□□□□ -1.36
NCKAP1-204ENST00000477988 FADS2P1A8MWK0 482 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 PF4P02776 101 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 ITGB3P05106 788 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 HMGA2P52926 109 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 CBX2Q14781 532 aaPredicted RBP6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 KIR3DS1Q14943 382 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 NBPF9Q3BBW0 867 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 BBS9Q3SYG4 887 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 NT5DC1Q5TFE4 455 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 RHOVQ96L33 236 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 RBM15Q96T37 977 aaKnown RBP eCLIP6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 MENTQ9BUN1 341 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 C1QTNF3Q9BXJ4 246 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 RNF19AQ9NV58 838 aa6.54□□□□□ -1.36
NCKAP1-204ENST00000477988 DNAJA2O60884 412 aa6.53□□□□□ -1.36
NCKAP1-204ENST00000477988 SYPP08247 313 aa6.53□□□□□ -1.36
NCKAP1-204ENST00000477988 RAD51AP2Q09MP3 1159 aa6.53□□□□□ -1.36
NCKAP1-204ENST00000477988 MPP2Q14168 576 aa6.53□□□□□ -1.36
NCKAP1-204ENST00000477988 RAB3GAP1Q15042 981 aa6.53□□□□□ -1.36
NCKAP1-204ENST00000477988 EAPPQ56P03 285 aaPredicted RBP6.53□□□□□ -1.36
NCKAP1-204ENST00000477988 LIPIQ6XZB0 460 aa6.53□□□□□ -1.36
NCKAP1-204ENST00000477988 SCAND2PQ9GZW5 306 aaPredicted RBP6.53□□□□□ -1.36
NCKAP1-204ENST00000477988 USP40Q9NVE5 1235 aa6.53□□□□□ -1.36
NCKAP1-204ENST00000477988 TAF6LQ9Y6J9 622 aa6.53□□□□□ -1.36
NCKAP1-204ENST00000477988 UBOX5O94941 541 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 LIMS1P48059 325 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 DAB2P98082 770 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 PWP1Q13610 501 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 HSF5Q4G112 596 aaPredicted RBP6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 NBPF12Q5TAG4 269 aaPredicted RBP6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 CPZQ66K79 652 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 REC114Q7Z4M0 266 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 TMC3Q7Z5M5 1100 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 RELL1Q8IUW5 271 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 TMEM74Q96NL1 305 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 RSRP1Q9BUV0 290 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 TNFRSF12AQ9NP84 129 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 DUSP10Q9Y6W6 482 aa6.52□□□□□ -1.37
NCKAP1-204ENST00000477988 A0A1W2PQ45 241 aaPredicted RBP6.51□□□□□ -1.37
NCKAP1-204ENST00000477988 A0A1W2PQY0 241 aa6.51□□□□□ -1.37
NCKAP1-204ENST00000477988 SIGLEC6O43699 453 aa6.51□□□□□ -1.37
NCKAP1-204ENST00000477988 FKTNO75072 461 aa6.51□□□□□ -1.37
NCKAP1-204ENST00000477988 PSMD2Q13200 908 aa6.51□□□□□ -1.37
NCKAP1-204ENST00000477988 SPATA25Q9BR10 227 aa6.51□□□□□ -1.37
NCKAP1-204ENST00000477988 PARP2Q9UGN5 583 aa6.51□□□□□ -1.37
NCKAP1-204ENST00000477988 ACSL6Q9UKU0 697 aa6.51□□□□□ -1.37
NCKAP1-204ENST00000477988 A0A1B0GTL3 188 aa6.5□□□□□ -1.37
NCKAP1-204ENST00000477988 PRAMEF1O95521 474 aa6.5□□□□□ -1.37
NCKAP1-204ENST00000477988 RAG1P15918 1043 aa6.5□□□□□ -1.37
NCKAP1-204ENST00000477988 CYP4F8P98187 520 aa6.5□□□□□ -1.37
NCKAP1-204ENST00000477988 ZPBP2Q6X784 338 aa6.5□□□□□ -1.37
NCKAP1-204ENST00000477988 SLCO6A1Q86UG4 719 aa6.5□□□□□ -1.37
NCKAP1-204ENST00000477988 ADGRG2Q8IZP9 1017 aa6.5□□□□□ -1.37
NCKAP1-204ENST00000477988 FNIP1Q8TF40 1166 aa6.5□□□□□ -1.37
NCKAP1-204ENST00000477988 ROBO2Q9HCK4 1378 aa6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 NUDT19A8MXV4 375 aa6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 SLPIP03973 132 aa6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 CTSHP09668 335 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms