RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 CCDC144CPQ8IYA2 1237 aa23.25■■□□□ 1.31
ACTB-210ENST00000477812 CTCFLQ8NI51 663 aaPredicted RBP23.25■■□□□ 1.31
ACTB-210ENST00000477812 ATG4CQ96DT6 458 aa23.25■■□□□ 1.31
ACTB-210ENST00000477812 CPVLQ9H3G5 476 aa23.25■■□□□ 1.31
ACTB-210ENST00000477812 GOLGA8AA7E2F4 631 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 KLRF2D3W0D1 207 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 LARGE1O95461 756 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 CDC27P30260 824 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 KIF5BP33176 963 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 MAP2K1Q02750 393 aaPredicted RBP23.24■■□□□ 1.31
ACTB-210ENST00000477812 RTN1Q16799 776 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 NBPF11Q86T75 865 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 PRPF38AQ8NAV1 312 aaKnown RBP23.24■■□□□ 1.31
ACTB-210ENST00000477812 REPS2Q8NFH8 660 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 CHURC1Q8WUH1 139 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 R3HDMLQ9H3Y0 253 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 WBP1LQ9NX94 342 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 SAGE1Q9NXZ1 904 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 HOXC10Q9NYD6 342 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 PRR12Q9ULL5 1215 aa23.24■■□□□ 1.31
ACTB-210ENST00000477812 ISY1Q9ULR0 285 aaKnown RBP23.24■■□□□ 1.31
ACTB-210ENST00000477812 ST18O60284 1047 aa23.23■■□□□ 1.31
ACTB-210ENST00000477812 PLEKHA8P1O95397 391 aa23.23■■□□□ 1.31
ACTB-210ENST00000477812 METAP2P50579 478 aaKnown RBP eCLIP23.23■■□□□ 1.311e-17■□□□□ 9.8
ACTB-210ENST00000477812 FUT2Q10981 343 aa23.23■■□□□ 1.31
ACTB-210ENST00000477812 SYDE2Q5VT97 1194 aa23.23■■□□□ 1.31
ACTB-210ENST00000477812 TMTC3Q6ZXV5 915 aa23.23■■□□□ 1.31
ACTB-210ENST00000477812 KIFC2Q96AC6 838 aa23.23■■□□□ 1.31
ACTB-210ENST00000477812 UBA5Q9GZZ9 404 aa23.23■■□□□ 1.31
ACTB-210ENST00000477812 VWA5AO00534 786 aa23.22■■□□□ 1.31
ACTB-210ENST00000477812 CYTH3O43739 400 aa23.22■■□□□ 1.31
ACTB-210ENST00000477812 TLR2O60603 784 aa23.22■■□□□ 1.31
ACTB-210ENST00000477812 CNMDO75829 334 aa23.22■■□□□ 1.31
ACTB-210ENST00000477812 ME3Q16798 604 aa23.22■■□□□ 1.31
ACTB-210ENST00000477812 NOL8Q76FK4 1167 aaKnown RBP23.22■■□□□ 1.31
ACTB-210ENST00000477812 SMCR8Q8TEV9 937 aaPredicted RBP23.22■■□□□ 1.31
ACTB-210ENST00000477812 SLC38A10Q9HBR0 1119 aa23.22■■□□□ 1.31
ACTB-210ENST00000477812 ZFYVE28Q9HCC9 887 aa23.22■■□□□ 1.31
ACTB-210ENST00000477812 TXNRD2Q9NNW7 524 aa23.22■■□□□ 1.31
ACTB-210ENST00000477812 RBM28Q9NW13 759 aaKnown RBP23.22■■□□□ 1.31
ACTB-210ENST00000477812 RBPJLQ9UBG7 517 aa23.22■■□□□ 1.31
ACTB-210ENST00000477812 NAP1L2Q9ULW6 460 aaPredicted RBP23.22■■□□□ 1.31
ACTB-210ENST00000477812 LIMCH1Q9UPQ0 1083 aa23.22■■□□□ 1.31
ACTB-210ENST00000477812 PFKFB2O60825 505 aa23.21■■□□□ 1.31
ACTB-210ENST00000477812 TRPA1O75762 1119 aa23.21■■□□□ 1.31
ACTB-210ENST00000477812 BCRP11274 1271 aa23.21■■□□□ 1.31
ACTB-210ENST00000477812 SMARCA1P28370 1054 aa23.21■■□□□ 1.31
ACTB-210ENST00000477812 GCLCP48506 637 aaPredicted RBP23.21■■□□□ 1.31
ACTB-210ENST00000477812 ST3GAL1Q11201 340 aa23.21■■□□□ 1.31
ACTB-210ENST00000477812 IKQ13123 557 aaPredicted RBP23.21■■□□□ 1.31
ACTB-210ENST00000477812 PPP2R5BQ15173 497 aa23.21■■□□□ 1.31
ACTB-210ENST00000477812 C17orf99Q6UX52 265 aa23.21■■□□□ 1.31
ACTB-210ENST00000477812 SRBD1Q8N5C6 995 aaKnown RBP23.21■■□□□ 1.31
ACTB-210ENST00000477812 GTF3C2Q8WUA4 911 aaPredicted RBP23.21■■□□□ 1.31
ACTB-210ENST00000477812 MTMR8Q96EF0 704 aa23.21■■□□□ 1.31
ACTB-210ENST00000477812 SPZ1Q9BXG8 430 aa23.21■■□□□ 1.31
ACTB-210ENST00000477812 RIOX1Q9H6W3 641 aa23.21■■□□□ 1.31
ACTB-210ENST00000477812 NCOA5Q9HCD5 579 aaKnown RBP23.21■■□□□ 1.31
ACTB-210ENST00000477812 COL11A1P12107 1806 aaPredicted RBP23.2■■□□□ 1.3
ACTB-210ENST00000477812 PEX10O60683 326 aa23.2■■□□□ 1.3
ACTB-210ENST00000477812 ADD1P35611 737 aaKnown RBP23.2■■□□□ 1.3
ACTB-210ENST00000477812 GNAQP50148 359 aa23.2■■□□□ 1.3
ACTB-210ENST00000477812 CCT2P78371 535 aaKnown RBP23.2■■□□□ 1.3
ACTB-210ENST00000477812 SCRN1Q12765 414 aa23.2■■□□□ 1.3
ACTB-210ENST00000477812 ADGRF4Q8IZF3 695 aa23.2■■□□□ 1.3
ACTB-210ENST00000477812 MB21D1Q8N884 522 aa23.2■■□□□ 1.3
ACTB-210ENST00000477812 LZTS2Q9BRK4 669 aa23.2■■□□□ 1.3
ACTB-210ENST00000477812 RANBP17Q9H2T7 1088 aaKnown RBP23.2■■□□□ 1.3
ACTB-210ENST00000477812 JMJD4Q9H9V9 463 aa23.2■■□□□ 1.3
ACTB-210ENST00000477812 BTBD7Q9P203 1132 aa23.2■■□□□ 1.3
ACTB-210ENST00000477812 MORF4L1Q9UBU8 362 aa23.2■■□□□ 1.3
ACTB-210ENST00000477812 ZNF536O15090 1300 aa23.19■■□□□ 1.3
ACTB-210ENST00000477812 CNTNAP5Q8WYK1 1306 aa23.19■■□□□ 1.3
ACTB-210ENST00000477812 TBC1D8O95759 1140 aa23.19■■□□□ 1.3
ACTB-210ENST00000477812 NTRK3Q16288 839 aa23.19■■□□□ 1.3
ACTB-210ENST00000477812 CMTR1Q8N1G2 835 aaKnown RBP23.19■■□□□ 1.3
ACTB-210ENST00000477812 CPA4Q9UI42 421 aa23.19■■□□□ 1.3
ACTB-210ENST00000477812 ZNF214Q9UL59 606 aaPredicted RBP23.19■■□□□ 1.3
ACTB-210ENST00000477812 RABGAP1Q9Y3P9 1069 aa23.19■■□□□ 1.3
ACTB-210ENST00000477812 CCDC196A0A1B0GTZ2 297 aa23.18■■□□□ 1.3
ACTB-210ENST00000477812 ATP2A1O14983 1001 aa23.18■■□□□ 1.3
ACTB-210ENST00000477812 FDX1P10109 184 aa23.18■■□□□ 1.3
ACTB-210ENST00000477812 SNAP25P60880 206 aa23.18■■□□□ 1.3
ACTB-210ENST00000477812 STK3Q13188 491 aa23.18■■□□□ 1.3
ACTB-210ENST00000477812 TMEM132BQ14DG7 1078 aa23.18■■□□□ 1.3
ACTB-210ENST00000477812 FAM110CQ1W6H9 321 aa23.18■■□□□ 1.3
ACTB-210ENST00000477812 SAMD1Q6SPF0 538 aaPredicted RBP23.18■■□□□ 1.3
ACTB-210ENST00000477812 ANKRD13CQ8N6S4 541 aa23.18■■□□□ 1.3
ACTB-210ENST00000477812 GTF3C6Q969F1 213 aa23.18■■□□□ 1.3
ACTB-210ENST00000477812 SLKQ9H2G2 1235 aaPredicted RBP23.18■■□□□ 1.3
ACTB-210ENST00000477812 BAZ2BQ9UIF8 2168 aaKnown RBP23.17■■□□□ 1.3
ACTB-210ENST00000477812 MCM2P49736 904 aa23.17■■□□□ 1.3
ACTB-210ENST00000477812 NECAB1Q8N987 351 aa23.17■■□□□ 1.3
ACTB-210ENST00000477812 OAZ1P54368 228 aa23.16■■□□□ 1.3
ACTB-210ENST00000477812 ERVK-9P63128 1117 aa23.16■■□□□ 1.3
ACTB-210ENST00000477812 ERVK-24P63145 666 aa23.16■■□□□ 1.3
ACTB-210ENST00000477812 CDC37Q16543 378 aaPredicted RBP23.16■■□□□ 1.3
ACTB-210ENST00000477812 NOM1Q5C9Z4 860 aaKnown RBP23.16■■□□□ 1.3
ACTB-210ENST00000477812 ZSCAN31Q96LW9 406 aaPredicted RBP23.16■■□□□ 1.3
ACTB-210ENST00000477812 PAGR1Q9BTK6 254 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms