RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 WWC2Q6AWC2 1192 aa20.4■□□□□ 0.86
CCM2-209ENST00000477605 C3orf67Q6ZVT6 689 aa20.4■□□□□ 0.86
CCM2-209ENST00000477605 MSL3Q8N5Y2 521 aaKnown RBP20.4■□□□□ 0.86
CCM2-209ENST00000477605 MTRQ99707 1265 aa20.4■□□□□ 0.86
CCM2-209ENST00000477605 PCDHA4Q9UN74 947 aa20.4■□□□□ 0.86
CCM2-209ENST00000477605 TSPY2A6NKD2 308 aa20.39■□□□□ 0.86
CCM2-209ENST00000477605 KCNJ18B7U540 433 aa20.39■□□□□ 0.86
CCM2-209ENST00000477605 RPS8P62241 208 aaKnown RBP20.39■□□□□ 0.86
CCM2-209ENST00000477605 KCNJ12Q14500 433 aa20.39■□□□□ 0.86
CCM2-209ENST00000477605 DAGLBQ8NCG7 672 aa20.39■□□□□ 0.86
CCM2-209ENST00000477605 NYXQ9GZU5 481 aa20.39■□□□□ 0.86
CCM2-209ENST00000477605 BLZF1Q9H2G9 400 aa20.39■□□□□ 0.86
CCM2-209ENST00000477605 KAT14Q9H8E8 782 aa20.39■□□□□ 0.86
CCM2-209ENST00000477605 ST7Q9NRC1 585 aa20.39■□□□□ 0.86
CCM2-209ENST00000477605 SRCAPQ6ZRS2 3230 aa20.39■□□□□ 0.86
CCM2-209ENST00000477605 COL4A1P02462 1669 aa20.39■□□□□ 0.86
CCM2-209ENST00000477605 LAD1O00515 517 aa20.39■□□□□ 0.85
CCM2-209ENST00000477605 SEC31AO94979 1220 aaKnown RBP20.39■□□□□ 0.85
CCM2-209ENST00000477605 WHAMMP3Q1A5X7 153 aa20.39■□□□□ 0.85
CCM2-209ENST00000477605 ZNF569Q5MCW4 686 aa20.39■□□□□ 0.85
CCM2-209ENST00000477605 RCSD1Q6JBY9 416 aa20.39■□□□□ 0.85
CCM2-209ENST00000477605 A0A1B0GUL6 1792 aa20.39■□□□□ 0.85
CCM2-209ENST00000477605 A0A1W2PQC6 194 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 USP5P45974 858 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 FAM47AQ5JRC9 791 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 MSANTD4Q8NCY6 345 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 NOC3LQ8WTT2 800 aaKnown RBP20.38■□□□□ 0.85
CCM2-209ENST00000477605 CELF1Q92879 486 aaKnown RBP20.38■□□□□ 0.85
CCM2-209ENST00000477605 RAB21Q9UL25 225 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 EEF1GP26641 437 aaKnown RBP20.38■□□□□ 0.85
CCM2-209ENST00000477605 CCT6AP40227 531 aaKnown RBP20.38■□□□□ 0.85
CCM2-209ENST00000477605 STAT6P42226 847 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 KIF4BQ2VIQ3 1234 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 ADSSL1Q8N142 457 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 STAMQ92783 540 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 NAPGQ99747 312 aaPredicted RBP20.38■□□□□ 0.85
CCM2-209ENST00000477605 FUT8Q9BYC5 575 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 IRX2Q9BZI1 471 aaPredicted RBP20.38■□□□□ 0.85
CCM2-209ENST00000477605 MAGEF1Q9HAY2 307 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 DISC1Q9NRI5 854 aa20.38■□□□□ 0.85
CCM2-209ENST00000477605 WTIPA6NIX2 430 aaPredicted RBP20.37■□□□□ 0.85
CCM2-209ENST00000477605 NMT2O60551 498 aa20.37■□□□□ 0.85
CCM2-209ENST00000477605 ZNF831Q5JPB2 1677 aa20.37■□□□□ 0.85
CCM2-209ENST00000477605 DTHD1Q6ZMT9 781 aa20.37■□□□□ 0.85
CCM2-209ENST00000477605 CCDC148Q8NFR7 591 aa20.37■□□□□ 0.85
CCM2-209ENST00000477605 NUP88Q99567 741 aaPredicted RBP20.37■□□□□ 0.85
CCM2-209ENST00000477605 CCSER1Q9C0I3 900 aa20.37■□□□□ 0.85
CCM2-209ENST00000477605 CUEDC2Q9H467 287 aa20.37■□□□□ 0.85
CCM2-209ENST00000477605 TCP11L1Q9NUJ3 509 aa20.37■□□□□ 0.85
CCM2-209ENST00000477605 MYH2Q9UKX2 1941 aa20.37■□□□□ 0.85
CCM2-209ENST00000477605 M0R2N6 131 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 SASH3O75995 380 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 ERVK-24P63145 666 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 STIM1Q13586 685 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 SMC1AQ14683 1233 aaKnown RBP20.36■□□□□ 0.85
CCM2-209ENST00000477605 GRM4Q14833 912 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 VPS16Q9H269 839 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 THAP9Q9H5L6 903 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 MYH14Q7Z406 1995 aaKnown RBP20.36■□□□□ 0.85
CCM2-209ENST00000477605 KCNQ2O43526 872 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 ERLIN1O75477 346 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 PRPHP41219 470 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 PRCPP42785 496 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 NLRP3Q96P20 1036 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 LZTS2Q9BRK4 669 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 EPC1Q9H2F5 836 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 TAB2Q9NYJ8 693 aa20.36■□□□□ 0.85
CCM2-209ENST00000477605 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.36■□□□□ 0.85
CCM2-209ENST00000477605 CNTNAP4Q9C0A0 1308 aa20.35■□□□□ 0.85
CCM2-209ENST00000477605 MAP2K7O14733 419 aa20.35■□□□□ 0.85
CCM2-209ENST00000477605 PLSCR1O15162 318 aa20.35■□□□□ 0.85
CCM2-209ENST00000477605 KRT9P35527 623 aa20.35■□□□□ 0.85
CCM2-209ENST00000477605 LONRF2Q1L5Z9 754 aa20.35■□□□□ 0.85
CCM2-209ENST00000477605 C12orf60Q5U649 245 aa20.35■□□□□ 0.85
CCM2-209ENST00000477605 CALCOCO1Q9P1Z2 691 aa20.35■□□□□ 0.85
CCM2-209ENST00000477605 CCDC194A0A1B0GVG4 234 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 PARP1P09874 1014 aaKnown RBP20.34■□□□□ 0.85
CCM2-209ENST00000477605 PPP1R2P41236 205 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 ARHGAP25P42331 645 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 ZNF662Q6ZS27 426 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 SLC35F6Q8N357 371 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 PNMA1Q8ND90 353 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 OR8K1Q8NGG5 319 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 KAT6BQ8WYB5 2073 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 ROBO3Q96MS0 1386 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 LGALS16A8MUM7 142 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 RHOBTB3O94955 611 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 CYP2D6P10635 497 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 TFAP4Q01664 338 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 UBXN1Q04323 297 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 GPS2Q13227 327 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 MB21D1Q8N884 522 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 GBP3Q9H0R5 595 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 MCM9Q9NXL9 1143 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 MKRN1Q9UHC7 482 aaKnown RBP20.34■□□□□ 0.85
CCM2-209ENST00000477605 LAMB1P07942 1786 aa20.34■□□□□ 0.85
CCM2-209ENST00000477605 BAZ2AQ9UIF9 1905 aaKnown RBP20.33■□□□□ 0.85
CCM2-209ENST00000477605 ACRBPQ8NEB7 543 aa20.33■□□□□ 0.85
CCM2-209ENST00000477605 DHTKD1Q96HY7 919 aaPredicted RBP20.33■□□□□ 0.85
CCM2-209ENST00000477605 AK8Q96MA6 479 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms