RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 PGK2P07205 417 aa20.83■□□□□ 0.93
PTPN7-209ENST00000477554 XRCC5P13010 732 aaKnown RBP20.83■□□□□ 0.93
PTPN7-209ENST00000477554 STAT3P40763 770 aa20.83■□□□□ 0.93
PTPN7-209ENST00000477554 GJA8P48165 433 aa20.83■□□□□ 0.93
PTPN7-209ENST00000477554 CPXCR1Q8N123 301 aa20.83■□□□□ 0.93
PTPN7-209ENST00000477554 TRPV1Q8NER1 839 aa20.83■□□□□ 0.93
PTPN7-209ENST00000477554 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.83■□□□□ 0.934e-10■■■■■ 31.1
PTPN7-209ENST00000477554 PDE4DIPQ5VU43 2346 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 IGHA2P01877 340 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 CYP21A2P08686 494 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 ZKSCAN1P17029 563 aaPredicted RBP20.82■□□□□ 0.92
PTPN7-209ENST00000477554 CYP2C19P33261 490 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 SLC16A2P36021 539 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 SLC1A4P43007 532 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 SNRNP48Q6IEG0 339 aaKnown RBP20.82■□□□□ 0.92
PTPN7-209ENST00000477554 STOX1Q6ZVD7 989 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 RIOX2Q8IUF8 465 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 PRPF38AQ8NAV1 312 aaKnown RBP20.82■□□□□ 0.92
PTPN7-209ENST00000477554 SHCBP1Q8NEM2 672 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 GMCL1Q96IK5 515 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 SLC38A10Q9HBR0 1119 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 TCP11L1Q9NUJ3 509 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 RAD50Q92878 1312 aa20.82■□□□□ 0.92
PTPN7-209ENST00000477554 CYB5R4Q7L1T6 521 aa20.81■□□□□ 0.92
PTPN7-209ENST00000477554 DIS3LQ8TF46 1054 aaKnown RBP20.81■□□□□ 0.92
PTPN7-209ENST00000477554 CPVLQ9H3G5 476 aa20.81■□□□□ 0.92
PTPN7-209ENST00000477554 ZSWIM5Q9P217 1185 aa20.81■□□□□ 0.92
PTPN7-209ENST00000477554 FEM1BQ9UK73 627 aa20.81■□□□□ 0.92
PTPN7-209ENST00000477554 SYNPO2Q9UMS6 1093 aa20.81■□□□□ 0.92
PTPN7-209ENST00000477554 IVNS1ABPQ9Y6Y0 642 aa20.81■□□□□ 0.92
PTPN7-209ENST00000477554 ZNF536O15090 1300 aa20.81■□□□□ 0.92
PTPN7-209ENST00000477554 PLXNA1Q9UIW2 1896 aa20.81■□□□□ 0.92
PTPN7-209ENST00000477554 SGPL1O95470 568 aa20.8■□□□□ 0.92
PTPN7-209ENST00000477554 HOXC6P09630 235 aa20.8■□□□□ 0.92
PTPN7-209ENST00000477554 IMMTQ16891 758 aaKnown RBP20.8■□□□□ 0.92
PTPN7-209ENST00000477554 UBE2Q1Q7Z7E8 422 aa20.8■□□□□ 0.92
PTPN7-209ENST00000477554 AGBL1Q96MI9 1066 aa20.8■□□□□ 0.92
PTPN7-209ENST00000477554 GPCPD1Q9NPB8 672 aa20.8■□□□□ 0.92
PTPN7-209ENST00000477554 FRMPD3Q5JV73 1810 aa20.8■□□□□ 0.92
PTPN7-209ENST00000477554 TOP1P11387 765 aaKnown RBP20.79■□□□□ 0.92
PTPN7-209ENST00000477554 MNX1P50219 401 aaPredicted RBP20.79■□□□□ 0.92
PTPN7-209ENST00000477554 CCDC96Q2M329 555 aa20.79■□□□□ 0.92
PTPN7-209ENST00000477554 PRAMEF19Q5SWL8 479 aa20.79■□□□□ 0.92
PTPN7-209ENST00000477554 MROH8Q9H579 483 aa20.79■□□□□ 0.92
PTPN7-209ENST00000477554 SENP2Q9HC62 589 aa20.79■□□□□ 0.92
PTPN7-209ENST00000477554 PCDH10Q9P2E7 1040 aa20.79■□□□□ 0.92
PTPN7-209ENST00000477554 RPTORQ8N122 1335 aa20.79■□□□□ 0.92
PTPN7-209ENST00000477554 DNAH12Q6ZR08 3092 aa20.79■□□□□ 0.92
PTPN7-209ENST00000477554 PDHBP11177 359 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 STAT2P52630 851 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 CCDC174Q6PII3 467 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 DPP9Q86TI2 863 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 ENAHQ8N8S7 591 aaPredicted RBP20.78■□□□□ 0.92
PTPN7-209ENST00000477554 ESR2Q92731 530 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 MMP19Q99542 508 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 LSG1Q9H089 658 aaKnown RBP20.78■□□□□ 0.92
PTPN7-209ENST00000477554 CRISPLD2Q9H0B8 497 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 RNF41Q9H4P4 317 aaPredicted RBP20.78■□□□□ 0.92
PTPN7-209ENST00000477554 HOMER2Q9NSB8 354 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 PRR12Q9ULL5 1215 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 GOLGA8HP0CJ92 632 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 IKQ13123 557 aaPredicted RBP20.78■□□□□ 0.92
PTPN7-209ENST00000477554 BMP2KLQ5H9B9 411 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 TEX13BQ9BXU2 312 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 HMX1Q9NP08 348 aaPredicted RBP20.78■□□□□ 0.92
PTPN7-209ENST00000477554 CTNNA3Q9UI47 895 aa20.78■□□□□ 0.92
PTPN7-209ENST00000477554 DDX49Q9Y6V7 483 aaKnown RBP20.78■□□□□ 0.92
PTPN7-209ENST00000477554 ZBED4O75132 1171 aa20.77■□□□□ 0.91
PTPN7-209ENST00000477554 SLC25A27O95847 323 aa20.77■□□□□ 0.91
PTPN7-209ENST00000477554 TFRCP02786 760 aaKnown RBP20.77■□□□□ 0.91
PTPN7-209ENST00000477554 LHX8Q68G74 356 aa20.77■□□□□ 0.91
PTPN7-209ENST00000477554 CHST3Q7LGC8 479 aa20.77■□□□□ 0.91
PTPN7-209ENST00000477554 RUFY2Q8WXA3 655 aa20.77■□□□□ 0.91
PTPN7-209ENST00000477554 MAP4K1Q92918 833 aa20.77■□□□□ 0.91
PTPN7-209ENST00000477554 MAML3Q96JK9 1138 aa20.77■□□□□ 0.91
PTPN7-209ENST00000477554 ESYT1Q9BSJ8 1104 aa20.77■□□□□ 0.91
PTPN7-209ENST00000477554 RBM8AQ9Y5S9 174 aaKnown RBP20.77■□□□□ 0.91
PTPN7-209ENST00000477554 TNKSO95271 1327 aa20.76■□□□□ 0.91
PTPN7-209ENST00000477554 ATP2A1O14983 1001 aa20.76■□□□□ 0.91
PTPN7-209ENST00000477554 STRNO43815 780 aa20.76■□□□□ 0.91
PTPN7-209ENST00000477554 PCP11498 1178 aaKnown RBP20.76■□□□□ 0.91
PTPN7-209ENST00000477554 FCER1AP12319 257 aa20.76■□□□□ 0.91
PTPN7-209ENST00000477554 ANO1Q5XXA6 986 aa20.76■□□□□ 0.91
PTPN7-209ENST00000477554 DCAF4Q8WV16 495 aa20.76■□□□□ 0.91
PTPN7-209ENST00000477554 FGD4Q96M96 766 aa20.76■□□□□ 0.91
PTPN7-209ENST00000477554 ZSCAN10Q96SZ4 725 aaPredicted RBP20.76■□□□□ 0.91
PTPN7-209ENST00000477554 LCTP09848 1927 aa20.75■□□□□ 0.91
PTPN7-209ENST00000477554 ALPK3Q96L96 1907 aa20.75■□□□□ 0.91
PTPN7-209ENST00000477554 SNHG28P0DPA3 235 aa20.75■□□□□ 0.91
PTPN7-209ENST00000477554 ZNF792Q3KQV3 632 aa20.75■□□□□ 0.91
PTPN7-209ENST00000477554 MUM1L1Q5H9M0 696 aa20.75■□□□□ 0.91
PTPN7-209ENST00000477554 ABRAQ8N0Z2 381 aa20.75■□□□□ 0.91
PTPN7-209ENST00000477554 E7EWF7 191 aa20.74■□□□□ 0.91
PTPN7-209ENST00000477554 FARP2O94887 1054 aaPredicted RBP20.74■□□□□ 0.91
PTPN7-209ENST00000477554 CYBAP13498 195 aa20.74■□□□□ 0.91
PTPN7-209ENST00000477554 ANTXR2P58335 489 aa20.74■□□□□ 0.91
PTPN7-209ENST00000477554 ZNF543Q08ER8 600 aa20.74■□□□□ 0.91
PTPN7-209ENST00000477554 SEC23AQ15436 765 aa20.74■□□□□ 0.91
PTPN7-209ENST00000477554 FAM160B2Q86V87 743 aa20.74■□□□□ 0.91
PTPN7-209ENST00000477554 PURBQ96QR8 312 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms