RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 WDHD1O75717 1129 aaPredicted RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 HSPA1AP0DMV8 641 aaKnown RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 HSPA1BP0DMV9 641 aaKnown RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 SCG2P13521 617 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 RASA1P20936 1047 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 CMA1P23946 247 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 KRT2P35908 639 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 CRKP46108 304 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 PLCD1P51178 756 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 SF3A1Q15459 793 aaKnown RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 GRIK5Q16478 980 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 PFKFB3Q16875 520 aaPredicted RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 FKBP1CQ5VVH2 108 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 MSL1Q68DK7 614 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 SMYD5Q6GMV2 418 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 GAS2L3Q86XJ1 694 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 FOXP4Q8IVH2 680 aaPredicted RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 DIS3L2Q8IYB7 885 aaKnown RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 CERS5Q8N5B7 392 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 PNMA1Q8ND90 353 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 CCDC12Q8WUD4 166 aaPredicted RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 PHKBQ93100 1093 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 CCDC34Q96HJ3 373 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 PGBD1Q96JS3 809 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 PPP1R9BQ96SB3 815 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 PYM1Q9BRP8 204 aaKnown RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 ZKSCAN3Q9BRR0 538 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 FUCA2Q9BTY2 467 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 PHF20Q9BVI0 1012 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 SPZ1Q9BXG8 430 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 TNMDQ9H2S6 317 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 INCENPQ9NQS7 918 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 SERPINB13Q9UIV8 391 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 HDAC9Q9UKV0 1011 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 NOL7Q9UMY1 257 aaKnown RBP7.67□□□□□ -1.18
LDB3-206ENST00000477489 JAG2Q9Y219 1238 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 SCN9AQ15858 1988 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 CNTNAP5Q8WYK1 1306 aa7.67□□□□□ -1.18
LDB3-206ENST00000477489 FER1L6Q2WGJ9 1857 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 IGKV6D-41A0A0C4DH26 115 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 PALM3A6NDB9 673 aaPredicted RBP7.66□□□□□ -1.18
LDB3-206ENST00000477489 CUTAO60888 179 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 CYP2D6P10635 497 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 RXRAP19793 462 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 ME1P48163 572 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 ORC2Q13416 577 aaPredicted RBP7.66□□□□□ -1.18
LDB3-206ENST00000477489 PKN1Q16512 942 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 FOXD4L6Q3SYB3 417 aaPredicted RBP7.66□□□□□ -1.18
LDB3-206ENST00000477489 ASPRV1Q53RT3 343 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 RBM26Q5T8P6 1007 aaKnown RBP7.66□□□□□ -1.18
LDB3-206ENST00000477489 APOBEC3HQ6NTF7 200 aaKnown RBP7.66□□□□□ -1.18
LDB3-206ENST00000477489 CDC42EP5Q6NZY7 148 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 FAM173BQ6P4H8 233 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 FOXD4L3Q6VB84 417 aaPredicted RBP7.66□□□□□ -1.18
LDB3-206ENST00000477489 METTL16Q86W50 562 aaKnown RBP7.66□□□□□ -1.18
LDB3-206ENST00000477489 MTMR14Q8NCE2 650 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 DAGLBQ8NCG7 672 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 ENGASEQ8NFI3 743 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 CHAMP1Q96JM3 812 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 MYL10Q9BUA6 226 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 TMEM134Q9H6X4 195 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 IL17RBQ9NRM6 502 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 USP40Q9NVE5 1235 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 DACT1Q9NYF0 836 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 TFIP11Q9UBB9 837 aaKnown RBP7.66□□□□□ -1.18
LDB3-206ENST00000477489 PI4KBQ9UBF8 816 aa7.66□□□□□ -1.18
LDB3-206ENST00000477489 ESYT2A0FGR8 921 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 RCCD1A6NED2 376 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 KIF28PB7ZC32 967 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 PPIP5K2O43314 1243 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 PARP1P09874 1014 aaKnown RBP7.65□□□□□ -1.18
LDB3-206ENST00000477489 SNHG28P0DPA3 235 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 CHRNA5P30532 468 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 GUCY1B3Q02153 619 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 HIC1Q14526 733 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 PTPAQ15257 358 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 FAM47AQ5JRC9 791 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 PPP1R18Q6NYC8 613 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 SASS6Q6UVJ0 657 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 CCAR1Q8IX12 1150 aaKnown RBP7.65□□□□□ -1.18
LDB3-206ENST00000477489 CCDC144CPQ8IYA2 1237 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 AGBL3Q8NEM8 1001 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 FAM200AQ8TCP9 573 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 ZNF516Q92618 1163 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 FERMT2Q96AC1 680 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 PDLIM2Q96JY6 352 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 TMEM47Q9BQJ4 181 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 IRX2Q9BZI1 471 aaPredicted RBP7.65□□□□□ -1.18
LDB3-206ENST00000477489 GLT8D2Q9H1C3 349 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 LTBP3Q9NS15 1303 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 TMOD2Q9NZR1 351 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 PIM2Q9P1W9 311 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 HOOK1Q9UJC3 728 aaKnown RBP7.65□□□□□ -1.18
LDB3-206ENST00000477489 PCDHA7Q9UN72 937 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 CD2APQ9Y5K6 639 aa7.65□□□□□ -1.18
LDB3-206ENST00000477489 V9GY48 417 aaPredicted RBP7.65□□□□□ -1.18
LDB3-206ENST00000477489 ARFGEF1Q9Y6D6 1849 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 TRIM75PA6NK02 468 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 LAD1O00515 517 aa7.64□□□□□ -1.19
LDB3-206ENST00000477489 TTLL1O95922 423 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms