RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 KRT83P78385 493 aa17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 TXNRD1Q16881 649 aa17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 BICDL1Q6ZP65 573 aa17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 ZNF594Q96JF6 807 aaPredicted RBP17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 SLF1Q9BQI6 1058 aa17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 SRP68Q9UHB9 627 aaKnown RBP17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 ANKRD18BA2A2Z9 1011 aa17.1■□□□□ 0.33
CLSTN1-205ENST00000477264 EYA2O00167 538 aa17.1■□□□□ 0.33
CLSTN1-205ENST00000477264 PLSCR1O15162 318 aa17.1■□□□□ 0.33
CLSTN1-205ENST00000477264 NTSR2O95665 410 aa17.1■□□□□ 0.33
CLSTN1-205ENST00000477264 PLCB4Q15147 1175 aa17.1■□□□□ 0.33
CLSTN1-205ENST00000477264 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
CLSTN1-205ENST00000477264 MMS19Q96T76 1030 aa17.1■□□□□ 0.33
CLSTN1-205ENST00000477264 FBXO3Q9UK99 471 aa17.1■□□□□ 0.33
CLSTN1-205ENST00000477264 N4BP3O15049 544 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 BMP15O95972 392 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 ITGA6P23229 1130 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 KRT31Q15323 416 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 ALS2CLQ60I27 953 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 ZNF572Q7Z3I7 529 aaPredicted RBP17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 PHKBQ93100 1093 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 XAGE2Q96GT9 111 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 NBPF3Q9H094 633 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 GUCA1BQ9UMX6 200 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 TMCO5BA8MYB1 307 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 KRT86O43790 486 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 RANBP6O60518 1105 aaKnown RBP17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 APPP05067 770 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 IFNAR1P17181 557 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 KRT9P35527 623 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 TOB1P50616 345 aaPredicted RBP17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 COPB1P53618 953 aaKnown RBP17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 APBA1Q02410 837 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 TBC1D9BQ66K14 1250 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 DIS3L2Q8IYB7 885 aaKnown RBP17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 GRAMD1CQ8IYS0 662 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 CAGE1Q8TC20 777 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 GREM2Q9H772 168 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 GGA2Q9UJY4 613 aa17.09■□□□□ 0.33
CLSTN1-205ENST00000477264 TIMM10P62072 90 aa17.08■□□□□ 0.33
CLSTN1-205ENST00000477264 FBXW10Q5XX13 1052 aa17.08■□□□□ 0.33
CLSTN1-205ENST00000477264 KLHL10Q6JEL2 608 aa17.08■□□□□ 0.33
CLSTN1-205ENST00000477264 MICU3Q86XE3 530 aa17.08■□□□□ 0.33
CLSTN1-205ENST00000477264 MMGT1Q8N4V1 131 aa17.08■□□□□ 0.33
CLSTN1-205ENST00000477264 RIN2Q8WYP3 895 aaPredicted RBP17.08■□□□□ 0.33
CLSTN1-205ENST00000477264 JAKMIP2Q96AA8 810 aa17.08■□□□□ 0.33
CLSTN1-205ENST00000477264 PYM1Q9BRP8 204 aaKnown RBP17.08■□□□□ 0.33
CLSTN1-205ENST00000477264 NYXQ9GZU5 481 aa17.08■□□□□ 0.33
CLSTN1-205ENST00000477264 UBR3Q6ZT12 1888 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 SRRM3A6NNA2 597 aaPredicted RBP17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 PPP1R3GB7ZBB8 358 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 GPAA1O43292 621 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 ATP1A1P05023 1023 aaKnown RBP17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 TNFRSF8P28908 595 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 LIFRP42702 1097 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 DPYDQ12882 1025 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 LRRC24Q50LG9 513 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 AMIGO3Q86WK7 504 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 TRIM22Q8IYM9 498 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 OTUD6BQ8N6M0 293 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 RUFY1Q96T51 708 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 GNL3LQ9NVN8 582 aaKnown RBP17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 RWDD2AQ9UIY3 292 aa17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 REXO2Q9Y3B8 237 aaKnown RBP17.08■□□□□ 0.32
CLSTN1-205ENST00000477264 LAMB2P55268 1798 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 CHUKO15111 745 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 MEFVO15553 781 aaPredicted RBP17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 ABL1P00519 1130 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 FNTAP49354 379 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 EPHB4P54760 987 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 NNTQ13423 1086 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 DRP2Q13474 957 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 TSR1Q2NL82 804 aaKnown RBP17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 EMBQ6PCB8 327 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 OR8K1Q8NGG5 319 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 DNAJC7Q99615 494 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 SLC26A6Q9BXS9 759 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 CAPN7Q9Y6W3 813 aa17.07■□□□□ 0.32
CLSTN1-205ENST00000477264 A0A1W2PQC6 194 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 H0YHG0 523 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 RDXP35241 583 aaKnown RBP17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 CYLC1P35663 651 aaPredicted RBP17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 STX17P56962 302 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 GRIN1Q05586 938 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 NEDD9Q14511 834 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 CCDC152Q4G0S7 254 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 CCDC122Q5T0U0 273 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 LDHAL6AQ6ZMR3 332 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 NFXL1Q6ZNB6 911 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 CYB5R4Q7L1T6 521 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 ANKRD18AQ8IVF6 992 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 BANK1Q8NDB2 785 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 GIMAP7Q8NHV1 300 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 CEP126Q9P2H0 1117 aa17.06■□□□□ 0.32
CLSTN1-205ENST00000477264 CTNND2Q9UQB3 1225 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms