RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 TYW1BQ6NUM6 668 aa22.85■■□□□ 1.25
CLK2-205ENST00000476983 MOB2Q70IA6 237 aa22.85■■□□□ 1.25
CLK2-205ENST00000476983 NMRK2Q9NPI5 230 aa22.85■■□□□ 1.25
CLK2-205ENST00000476983 TFIP11Q9UBB9 837 aaKnown RBP22.85■■□□□ 1.25
CLK2-205ENST00000476983 STXBP3O00186 592 aa22.84■■□□□ 1.25
CLK2-205ENST00000476983 NLRP5P59047 1200 aa22.84■■□□□ 1.25
CLK2-205ENST00000476983 SPP2Q13103 211 aa22.84■■□□□ 1.25
CLK2-205ENST00000476983 VGLL4Q14135 290 aa22.84■■□□□ 1.25
CLK2-205ENST00000476983 NOL9Q5SY16 702 aaKnown RBP22.84■■□□□ 1.25
CLK2-205ENST00000476983 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.84■■□□□ 1.25
CLK2-205ENST00000476983 ZHX2Q9Y6X8 837 aa22.84■■□□□ 1.25
CLK2-205ENST00000476983 TRAF5O00463 557 aa22.83■■□□□ 1.25
CLK2-205ENST00000476983 SNAP25P60880 206 aa22.83■■□□□ 1.25
CLK2-205ENST00000476983 MAP3K9P80192 1104 aa22.83■■□□□ 1.25
CLK2-205ENST00000476983 FMR1Q06787 632 aaKnown RBP eCLIP22.83■■□□□ 1.25
CLK2-205ENST00000476983 NR5A1Q13285 461 aa22.83■■□□□ 1.25
CLK2-205ENST00000476983 AS3MTQ9HBK9 375 aa22.83■■□□□ 1.25
CLK2-205ENST00000476983 SNCAIPQ9Y6H5 919 aa22.83■■□□□ 1.25
CLK2-205ENST00000476983 TRIM75PA6NK02 468 aa22.83■■□□□ 1.24
CLK2-205ENST00000476983 PRPF40AO75400 957 aaKnown RBP22.83■■□□□ 1.24
CLK2-205ENST00000476983 IREB2P48200 963 aaKnown RBP22.83■■□□□ 1.24
CLK2-205ENST00000476983 KRT85P78386 507 aa22.83■■□□□ 1.24
CLK2-205ENST00000476983 SYDE2Q5VT97 1194 aa22.83■■□□□ 1.24
CLK2-205ENST00000476983 SAMD1Q6SPF0 538 aaPredicted RBP22.83■■□□□ 1.24
CLK2-205ENST00000476983 BRAPQ7Z569 592 aa22.83■■□□□ 1.24
CLK2-205ENST00000476983 FTOQ9C0B1 505 aaKnown RBP eCLIP22.83■■□□□ 1.24
CLK2-205ENST00000476983 KIAA1683Q9H0B3 1180 aa22.83■■□□□ 1.24
CLK2-205ENST00000476983 BARHL2Q9NY43 387 aa22.83■■□□□ 1.24
CLK2-205ENST00000476983 KRT2P35908 639 aa22.82■■□□□ 1.24
CLK2-205ENST00000476983 NAPAP54920 295 aa22.82■■□□□ 1.24
CLK2-205ENST00000476983 CEBPZQ03701 1054 aaKnown RBP22.82■■□□□ 1.24
CLK2-205ENST00000476983 ZNF280CQ8ND82 737 aa22.82■■□□□ 1.24
CLK2-205ENST00000476983 COA7Q96BR5 231 aa22.82■■□□□ 1.24
CLK2-205ENST00000476983 ZNF408Q9H9D4 720 aa22.82■■□□□ 1.24
CLK2-205ENST00000476983 ADAMTS3O15072 1205 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 U2AF2P26368 475 aaKnown RBP eCLIP22.81■■□□□ 1.249e-7■■□□□ 13.7
CLK2-205ENST00000476983 STAT2P52630 851 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 NPY5RQ15761 445 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 CDC37Q16543 378 aaPredicted RBP22.81■■□□□ 1.24
CLK2-205ENST00000476983 MYSM1Q5VVJ2 828 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 WDR18Q9BV38 432 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 SH3GLB2Q9NR46 395 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 CSADQ9Y600 493 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 PNMA6FA0A0J9YX94 578 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 ZBTB5O15062 677 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 PPP1R11O60927 126 aaPredicted RBP22.81■■□□□ 1.24
CLK2-205ENST00000476983 QRICH1Q2TAL8 776 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 CCDC148Q8NFR7 591 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 MTMR8Q96EF0 704 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 BRMS1Q9HCU9 246 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 LMBRD1Q9NUN5 540 aa22.81■■□□□ 1.24
CLK2-205ENST00000476983 TPRNQ4KMQ1 711 aa22.8■■□□□ 1.24
CLK2-205ENST00000476983 BTNL9Q6UXG8 535 aa22.8■■□□□ 1.24
CLK2-205ENST00000476983 NOSTRINQ8IVI9 506 aa22.8■■□□□ 1.24
CLK2-205ENST00000476983 USP28Q96RU2 1077 aa22.8■■□□□ 1.24
CLK2-205ENST00000476983 FOXP1Q9H334 677 aaPredicted RBP22.8■■□□□ 1.24
CLK2-205ENST00000476983 EMILIN3Q9NT22 766 aa22.8■■□□□ 1.24
CLK2-205ENST00000476983 PRR12Q9ULL5 1215 aa22.8■■□□□ 1.24
CLK2-205ENST00000476983 BACE1P56817 501 aa22.79■■□□□ 1.24
CLK2-205ENST00000476983 CNKSR2Q8WXI2 1034 aa22.79■■□□□ 1.24
CLK2-205ENST00000476983 KIFC2Q96AC6 838 aa22.79■■□□□ 1.24
CLK2-205ENST00000476983 CLMNQ96JQ2 1002 aa22.79■■□□□ 1.24
CLK2-205ENST00000476983 ZNF396Q96N95 335 aaPredicted RBP22.79■■□□□ 1.24
CLK2-205ENST00000476983 ELP3Q9H9T3 547 aa22.79■■□□□ 1.24
CLK2-205ENST00000476983 FBXO28Q9NVF7 368 aa22.79■■□□□ 1.24
CLK2-205ENST00000476983 FAM205CA6NFA0 338 aa22.79■■□□□ 1.24
CLK2-205ENST00000476983 USP14P54578 494 aa22.79■■□□□ 1.24
CLK2-205ENST00000476983 LDHDQ86WU2 507 aa22.79■■□□□ 1.24
CLK2-205ENST00000476983 WDR46O15213 610 aaKnown RBP22.78■■□□□ 1.24
CLK2-205ENST00000476983 VCAM1P19320 739 aa22.78■■□□□ 1.24
CLK2-205ENST00000476983 HMGCS2P54868 508 aa22.78■■□□□ 1.24
CLK2-205ENST00000476983 NOM1Q5C9Z4 860 aaKnown RBP22.78■■□□□ 1.24
CLK2-205ENST00000476983 LPAR1Q92633 364 aa22.78■■□□□ 1.24
CLK2-205ENST00000476983 CALML3P27482 149 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 EARS2Q5JPH6 523 aaKnown RBP22.77■■□□□ 1.24
CLK2-205ENST00000476983 BLIDQ8IZY5 108 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 RASGRP4Q8TDF6 673 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 CCDC12Q8WUD4 166 aaPredicted RBP22.77■■□□□ 1.24
CLK2-205ENST00000476983 SPATA32Q96LK8 384 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 PCDHA4Q9UN74 947 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 AFG3L2Q9Y4W6 797 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 SMCO2A6NFE2 343 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 hCG_1984214I3L0E3 225 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 TAL1P17542 331 aaPredicted RBP22.77■■□□□ 1.24
CLK2-205ENST00000476983 ARMC9Q7Z3E5 817 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 ANKRD13AQ8IZ07 590 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 ZNF713Q8N859 430 aaPredicted RBP22.77■■□□□ 1.24
CLK2-205ENST00000476983 CHURC1Q8WUH1 139 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 TANGO6Q9C0B7 1094 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 FEM1BQ9UK73 627 aa22.77■■□□□ 1.24
CLK2-205ENST00000476983 GADD45BO75293 160 aaPredicted RBP22.76■■□□□ 1.23
CLK2-205ENST00000476983 TMEM87AQ8NBN3 555 aa22.76■■□□□ 1.23
CLK2-205ENST00000476983 LEO1Q8WVC0 666 aaPredicted RBP22.76■■□□□ 1.23
CLK2-205ENST00000476983 TNFRSF25Q93038 417 aa22.76■■□□□ 1.23
CLK2-205ENST00000476983 RPAP3Q9H6T3 665 aaPredicted RBP22.76■■□□□ 1.23
CLK2-205ENST00000476983 CFAP45Q9UL16 551 aa22.76■■□□□ 1.23
CLK2-205ENST00000476983 CLIC4Q9Y696 253 aa22.76■■□□□ 1.23
CLK2-205ENST00000476983 MAP3K11Q16584 847 aa22.75■■□□□ 1.23
CLK2-205ENST00000476983 FAM160B2Q86V87 743 aa22.75■■□□□ 1.23
CLK2-205ENST00000476983 ZMYND12Q9H0C1 365 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms