RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 MPOP05164 745 aa8.54□□□□□ -1.04
NUP58-209ENST00000476553 RLBP1P12271 317 aa8.54□□□□□ -1.04
NUP58-209ENST00000476553 PUM1Q14671 1186 aaKnown RBP eCLIP8.54□□□□□ -1.04
NUP58-209ENST00000476553 ZFYVE27Q5T4F4 411 aa8.54□□□□□ -1.04
NUP58-209ENST00000476553 ZNF655Q8N720 491 aaPredicted RBP8.54□□□□□ -1.04
NUP58-209ENST00000476553 ASCC2Q9H1I8 757 aaPredicted RBP8.54□□□□□ -1.04
NUP58-209ENST00000476553 CHURC1-FNTBB4DL54 471 aa8.53□□□□□ -1.04
NUP58-209ENST00000476553 PCBP3P57721 371 aaKnown RBP8.53□□□□□ -1.04
NUP58-209ENST00000476553 RTP1P59025 263 aa8.53□□□□□ -1.04
NUP58-209ENST00000476553 PHC3Q8NDX5 983 aa8.53□□□□□ -1.04
NUP58-209ENST00000476553 FCRL2Q96LA5 508 aaPredicted RBP8.53□□□□□ -1.04
NUP58-209ENST00000476553 KLHL3Q9UH77 587 aa8.53□□□□□ -1.04
NUP58-209ENST00000476553 FADS2P1A8MWK0 482 aa8.52□□□□□ -1.05
NUP58-209ENST00000476553 DNAJA2O60884 412 aa8.52□□□□□ -1.05
NUP58-209ENST00000476553 IGFBP6P24592 240 aaPredicted RBP8.52□□□□□ -1.05
NUP58-209ENST00000476553 TMEM62Q0P6H9 643 aa8.52□□□□□ -1.05
NUP58-209ENST00000476553 KIR3DS1Q14943 382 aa8.52□□□□□ -1.05
NUP58-209ENST00000476553 HSF5Q4G112 596 aaPredicted RBP8.52□□□□□ -1.05
NUP58-209ENST00000476553 ZPBP2Q6X784 338 aa8.52□□□□□ -1.05
NUP58-209ENST00000476553 BNC2Q6ZN30 1099 aaPredicted RBP8.52□□□□□ -1.05
NUP58-209ENST00000476553 SND1Q7KZF4 910 aaKnown RBP eCLIP8.52□□□□□ -1.05
NUP58-209ENST00000476553 TNFRSF12AQ9NP84 129 aa8.52□□□□□ -1.05
NUP58-209ENST00000476553 AK5Q9Y6K8 562 aa8.52□□□□□ -1.05
NUP58-209ENST00000476553 UNCXA6NJT0 531 aa8.51□□□□□ -1.05
NUP58-209ENST00000476553 BPNT1O95861 308 aa8.51□□□□□ -1.05
NUP58-209ENST00000476553 SLURP1P55000 103 aa8.51□□□□□ -1.05
NUP58-209ENST00000476553 MEI1Q5TIA1 1274 aa8.51□□□□□ -1.05
NUP58-209ENST00000476553 GALNT18Q6P9A2 607 aa8.51□□□□□ -1.05
NUP58-209ENST00000476553 TNFRSF10DQ9UBN6 386 aa8.51□□□□□ -1.05
NUP58-209ENST00000476553 TAF6LQ9Y6J9 622 aa8.51□□□□□ -1.05
NUP58-209ENST00000476553 BUB1BO60566 1050 aaPredicted RBP8.5□□□□□ -1.05
NUP58-209ENST00000476553 HTR3BO95264 441 aa8.5□□□□□ -1.05
NUP58-209ENST00000476553 KCNC1P48547 511 aa8.5□□□□□ -1.05
NUP58-209ENST00000476553 LAPTM5Q13571 262 aa8.5□□□□□ -1.05
NUP58-209ENST00000476553 CBX2Q14781 532 aaPredicted RBP8.5□□□□□ -1.05
NUP58-209ENST00000476553 TMC3Q7Z5M5 1100 aa8.5□□□□□ -1.05
NUP58-209ENST00000476553 KIF2CQ99661 725 aa8.5□□□□□ -1.05
NUP58-209ENST00000476553 NOC4LQ9BVI4 516 aaKnown RBP8.5□□□□□ -1.05
NUP58-209ENST00000476553 GPR55Q9Y2T6 319 aaPredicted RBP8.5□□□□□ -1.05
NUP58-209ENST00000476553 POLR3KQ9Y2Y1 108 aaPredicted RBP8.5□□□□□ -1.05
NUP58-209ENST00000476553 FKTNO75072 461 aa8.49□□□□□ -1.05
NUP58-209ENST00000476553 PRPF40AO75400 957 aaKnown RBP8.49□□□□□ -1.05
NUP58-209ENST00000476553 CANXP27824 592 aaKnown RBP8.49□□□□□ -1.05
NUP58-209ENST00000476553 ARL4AP40617 200 aa8.49□□□□□ -1.05
NUP58-209ENST00000476553 CEBPAP49715 358 aaPredicted RBP8.49□□□□□ -1.05
NUP58-209ENST00000476553 RNF4P78317 190 aa8.49□□□□□ -1.05
NUP58-209ENST00000476553 RAB3GAP1Q15042 981 aa8.49□□□□□ -1.05
NUP58-209ENST00000476553 DIEXFQ68CQ4 756 aaKnown RBP8.49□□□□□ -1.05
NUP58-209ENST00000476553 SLCO6A1Q86UG4 719 aa8.49□□□□□ -1.05
NUP58-209ENST00000476553 PHACTR4Q8IZ21 702 aa8.49□□□□□ -1.05
NUP58-209ENST00000476553 GATAD2BQ8WXI9 593 aa8.49□□□□□ -1.05
NUP58-209ENST00000476553 IVNS1ABPQ9Y6Y0 642 aa8.49□□□□□ -1.05
NUP58-209ENST00000476553 IRS2Q9Y4H2 1338 aa8.49□□□□□ -1.05
NUP58-209ENST00000476553 K7ESM1 405 aa8.48□□□□□ -1.05
NUP58-209ENST00000476553 PPM1GO15355 546 aaPredicted RBP8.48□□□□□ -1.05
NUP58-209ENST00000476553 SYPP08247 313 aa8.48□□□□□ -1.05
NUP58-209ENST00000476553 TNFRSF1AP19438 455 aa8.48□□□□□ -1.05
NUP58-209ENST00000476553 NCKAP1LP55160 1127 aa8.48□□□□□ -1.05
NUP58-209ENST00000476553 VWA3BQ502W6 1294 aa8.48□□□□□ -1.05
NUP58-209ENST00000476553 WTIPA6NIX2 430 aaPredicted RBP8.47□□□□□ -1.05
NUP58-209ENST00000476553 RGS13O14921 159 aa8.47□□□□□ -1.05
NUP58-209ENST00000476553 AKAP8O43823 692 aaKnown RBP8.47□□□□□ -1.05
NUP58-209ENST00000476553 F13A1P00488 732 aa8.47□□□□□ -1.05
NUP58-209ENST00000476553 PLEKHN1Q494U1 663 aaPredicted RBP8.47□□□□□ -1.05
NUP58-209ENST00000476553 RPTNQ6XPR3 784 aa8.47□□□□□ -1.05
NUP58-209ENST00000476553 GPR20Q99678 358 aa8.47□□□□□ -1.05
NUP58-209ENST00000476553 POLR3GLQ9BT43 218 aa8.47□□□□□ -1.05
NUP58-209ENST00000476553 SSU72P8A0A1W2PR75 194 aa8.46□□□□□ -1.06
NUP58-209ENST00000476553 NUDT19A8MXV4 375 aa8.46□□□□□ -1.06
NUP58-209ENST00000476553 UBOX5O94941 541 aa8.46□□□□□ -1.06
NUP58-209ENST00000476553 ST13P50502 369 aaKnown RBP8.46□□□□□ -1.06
NUP58-209ENST00000476553 LMNB2Q03252 620 aa8.46□□□□□ -1.06
NUP58-209ENST00000476553 SNW1Q13573 536 aaKnown RBP8.46□□□□□ -1.06
NUP58-209ENST00000476553 ZNF827Q17R98 1081 aa8.46□□□□□ -1.06
NUP58-209ENST00000476553 NBPF9Q3BBW0 867 aa8.46□□□□□ -1.06
NUP58-209ENST00000476553 ERVK13-1Q9NX77 482 aa8.46□□□□□ -1.06
NUP58-209ENST00000476553 ACSL6Q9UKU0 697 aa8.46□□□□□ -1.06
NUP58-209ENST00000476553 PRAMEF1O95521 474 aa8.45□□□□□ -1.06
NUP58-209ENST00000476553 LIMS1P48059 325 aa8.45□□□□□ -1.06
NUP58-209ENST00000476553 RNF19AQ9NV58 838 aa8.45□□□□□ -1.06
NUP58-209ENST00000476553 PALD1Q9ULE6 856 aa8.45□□□□□ -1.06
NUP58-209ENST00000476553 PRKCAP17252 672 aa8.44□□□□□ -1.06
NUP58-209ENST00000476553 FBLN1P23142 703 aa8.44□□□□□ -1.06
NUP58-209ENST00000476553 GBP1P32455 592 aa8.44□□□□□ -1.06
NUP58-209ENST00000476553 CAMK2GQ13555 558 aaPredicted RBP8.44□□□□□ -1.06
NUP58-209ENST00000476553 NLGN1Q8N2Q7 840 aa8.44□□□□□ -1.06
NUP58-209ENST00000476553 RHOVQ96L33 236 aa8.44□□□□□ -1.06
NUP58-209ENST00000476553 SIGLEC6O43699 453 aa8.43□□□□□ -1.06
NUP58-209ENST00000476553 GRIN3BO60391 1043 aa8.43□□□□□ -1.06
NUP58-209ENST00000476553 MAGEA10P43363 369 aaPredicted RBP8.43□□□□□ -1.06
NUP58-209ENST00000476553 UBXN11Q5T124 520 aa8.43□□□□□ -1.06
NUP58-209ENST00000476553 NBPF12Q5TAG4 269 aaPredicted RBP8.43□□□□□ -1.06
NUP58-209ENST00000476553 LIPIQ6XZB0 460 aa8.43□□□□□ -1.06
NUP58-209ENST00000476553 A0A1W2PQ45 241 aaPredicted RBP8.42□□□□□ -1.06
NUP58-209ENST00000476553 A0A1W2PQY0 241 aa8.42□□□□□ -1.06
NUP58-209ENST00000476553 SUV39H1O43463 412 aa8.42□□□□□ -1.06
NUP58-209ENST00000476553 MSL3P1P0C860 447 aa8.42□□□□□ -1.06
NUP58-209ENST00000476553 ENDOUP21128 410 aaKnown RBP8.42□□□□□ -1.06
NUP58-209ENST00000476553 MAPKAPK2P49137 400 aa8.42□□□□□ -1.06
NUP58-209ENST00000476553 CHMP4BP1P59074 171 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms