RNA–Protein interactions for RNA: ENST00000476501.3

RN7SL559P-201, Transcript of RNA, 7SL, cytoplasmic 559, pseudogene, humanhuman

BASIC

Gene RN7SL559P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL559P-201ENST00000476501 PARP14Q460N5 1801 aa13.52□□□□□ -0.25
RN7SL559P-201ENST00000476501 MAGEB6P1A0A0J9YX57 407 aa13.51□□□□□ -0.25
RN7SL559P-201ENST00000476501 WDR46O15213 610 aaKnown RBP13.51□□□□□ -0.25
RN7SL559P-201ENST00000476501 DUSP11O75319 330 aaKnown RBP13.51□□□□□ -0.25
RN7SL559P-201ENST00000476501 CCL23P55773 120 aa13.51□□□□□ -0.25
RN7SL559P-201ENST00000476501 SLFN5Q08AF3 891 aa13.51□□□□□ -0.25
RN7SL559P-201ENST00000476501 CCSAPQ6IQ19 270 aaPredicted RBP13.51□□□□□ -0.25
RN7SL559P-201ENST00000476501 FAM126BQ8IXS8 530 aa13.51□□□□□ -0.25
RN7SL559P-201ENST00000476501 VCPKMTQ9H867 229 aa13.51□□□□□ -0.25
RN7SL559P-201ENST00000476501 CERS4Q9HA82 394 aa13.51□□□□□ -0.25
RN7SL559P-201ENST00000476501 GPR108Q9NPR9 543 aa13.51□□□□□ -0.25
RN7SL559P-201ENST00000476501 LRRC37A2A6NM11 1700 aa13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 RFXAPO00287 272 aa13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 CST5P28325 142 aaPredicted RBP13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 COPB2P35606 906 aa13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 EVX2Q03828 476 aa13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 GABPAQ06546 454 aa13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 CRNKL1Q9BZJ0 848 aaKnown RBP13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 CCDC8Q9H0W5 538 aaPredicted RBP13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 FBXO28Q9NVF7 368 aa13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 TMX2Q9Y320 296 aa13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 PCDHA11Q9Y5I1 949 aa13.5□□□□□ -0.25
RN7SL559P-201ENST00000476501 UMODL1Q5DID0 1318 aa13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 CHD9Q3L8U1 2897 aa13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 VWA5AO00534 786 aa13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 GPR37L1O60883 481 aa13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 SNAI1O95863 264 aaPredicted RBP13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 ACVR2BQ13705 512 aa13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 NOL8Q76FK4 1167 aaKnown RBP13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 MSL3Q8N5Y2 521 aaKnown RBP13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 ZNF512BQ96KM6 892 aaPredicted RBP13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 COG5Q9UP83 839 aa13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 REV3LO60673 3130 aa13.49□□□□□ -0.25
RN7SL559P-201ENST00000476501 SURF6O75683 361 aaKnown RBP13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 AKR1B1P15121 316 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 ATP2A2P16615 1042 aaKnown RBP13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 BEX3Q00994 111 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 CCDC144BQ3MJ40 725 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 TMEM67Q5HYA8 995 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 RPUSD2Q8IZ73 545 aaKnown RBP13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 SDR42E1Q8WUS8 393 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 HLA-CQ95604 372 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 DYNLL2Q96FJ2 89 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 ANTXR1Q9H6X2 564 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 TLR7Q9NYK1 1049 aaKnown RBP13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 SWAP70Q9UH65 585 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 CTDP1Q9Y5B0 961 aaPredicted RBP13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 MTCH2Q9Y6C9 303 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 BDP1A6H8Y1 2624 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 NCOR1O75376 2440 aa13.48□□□□□ -0.25
RN7SL559P-201ENST00000476501 TLL1O43897 1013 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 CD4P01730 458 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 CA3P07451 260 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 CYP2D6P10635 497 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 GJA9P57773 515 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 FAM83BQ5T0W9 1011 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 KRT40Q6A162 431 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 SNRNP48Q6IEG0 339 aaKnown RBP13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 RIOK1Q9BRS2 568 aaKnown RBP13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 GOPCQ9HD26 462 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 DBNLQ9UJU6 430 aaKnown RBP13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 ZNF214Q9UL59 606 aaPredicted RBP13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 PPP1R9AQ9ULJ8 1098 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 ADAMTS5Q9UNA0 930 aa13.47□□□□□ -0.25
RN7SL559P-201ENST00000476501 XIRP2A4UGR9 3374 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 MCM3APO60318 1980 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 ADCY6O43306 1168 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 EEF2P13639 858 aaKnown RBP13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 ITGA7Q13683 1181 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 CXCL17Q6UXB2 119 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 MAMDC4Q6UXC1 1216 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 SIAH1Q8IUQ4 282 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 ARNTL2Q8WYA1 636 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 SCLYQ96I15 445 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 ABHD16BQ9H3Z7 469 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 C11orf16Q9NQ32 467 aa13.46□□□□□ -0.25
RN7SL559P-201ENST00000476501 BCAR3O75815 825 aa13.45□□□□□ -0.26
RN7SL559P-201ENST00000476501 CT47B1P0C2W7 299 aaPredicted RBP13.45□□□□□ -0.26
RN7SL559P-201ENST00000476501 SLC9C2Q5TAH2 1124 aa13.45□□□□□ -0.26
RN7SL559P-201ENST00000476501 ARMCX2Q7L311 632 aa13.45□□□□□ -0.26
RN7SL559P-201ENST00000476501 DEFB128Q7Z7B8 93 aa13.45□□□□□ -0.26
RN7SL559P-201ENST00000476501 CPXCR1Q8N123 301 aa13.45□□□□□ -0.26
RN7SL559P-201ENST00000476501 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
RN7SL559P-201ENST00000476501 TEX13BQ9BXU2 312 aa13.45□□□□□ -0.26
RN7SL559P-201ENST00000476501 DCP1AQ9NPI6 582 aaPredicted RBP13.45□□□□□ -0.26
RN7SL559P-201ENST00000476501 CHD7Q9P2D1 2997 aa13.45□□□□□ -0.26
RN7SL559P-201ENST00000476501 MRE11P49959 708 aa13.44□□□□□ -0.26
RN7SL559P-201ENST00000476501 TNFAIP2Q03169 654 aa13.44□□□□□ -0.26
RN7SL559P-201ENST00000476501 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
RN7SL559P-201ENST00000476501 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
RN7SL559P-201ENST00000476501 AMOTL1Q8IY63 956 aa13.44□□□□□ -0.26
RN7SL559P-201ENST00000476501 ARHGAP45Q92619 1136 aa13.44□□□□□ -0.26
RN7SL559P-201ENST00000476501 FRAT1Q92837 279 aaPredicted RBP13.44□□□□□ -0.26
RN7SL559P-201ENST00000476501 CLUAP1Q96AJ1 413 aa13.44□□□□□ -0.26
RN7SL559P-201ENST00000476501 CCDC17Q96LX7 622 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms