RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 WDR78Q5VTH9 848 aa24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 SHCBP1Q8NEM2 672 aa24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 SLC38A10Q9HBR0 1119 aa24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 CWC22Q9HCG8 908 aaKnown RBP24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 ZNF214Q9UL59 606 aaPredicted RBP24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 FRMPD2Q68DX3 1309 aaPredicted RBP24.61■■□□□ 1.53
MAP1LC3A-204ENST00000476428 ZNF543Q08ER8 600 aa24.6■■□□□ 1.53
MAP1LC3A-204ENST00000476428 MORN1Q5T089 497 aa24.6■■□□□ 1.53
MAP1LC3A-204ENST00000476428 BTNL9Q6UXG8 535 aa24.6■■□□□ 1.53
MAP1LC3A-204ENST00000476428 RIOX2Q8IUF8 465 aa24.6■■□□□ 1.53
MAP1LC3A-204ENST00000476428 CTDP1Q9Y5B0 961 aaPredicted RBP24.6■■□□□ 1.53
MAP1LC3A-204ENST00000476428 PTPREP23469 700 aa24.59■■□□□ 1.53
MAP1LC3A-204ENST00000476428 IRF5Q13568 498 aa24.59■■□□□ 1.53
MAP1LC3A-204ENST00000476428 NCAPG2Q86XI2 1143 aa24.59■■□□□ 1.53
MAP1LC3A-204ENST00000476428 IGDCC4Q8TDY8 1250 aa24.59■■□□□ 1.53
MAP1LC3A-204ENST00000476428 KCNB2Q92953 911 aa24.59■■□□□ 1.53
MAP1LC3A-204ENST00000476428 NUDT12Q9BQG2 462 aa24.59■■□□□ 1.53
MAP1LC3A-204ENST00000476428 SENP2Q9HC62 589 aa24.59■■□□□ 1.53
MAP1LC3A-204ENST00000476428 PRR12Q9ULL5 1215 aa24.59■■□□□ 1.53
MAP1LC3A-204ENST00000476428 ERICH2A1L162 156 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 PRC1O43663 620 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 SLC25A27O95847 323 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 FDX1P10109 184 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 MCM5P33992 734 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 HSPA4P34932 840 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 SLC16A2P36021 539 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 SART3Q15020 963 aaKnown RBP24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 SLC9C1Q4G0N8 1177 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 TMEM67Q5HYA8 995 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 CPXCR1Q8N123 301 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 SH3TC2Q8TF17 1288 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 USP6NLQ92738 828 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 ARMC5Q96C12 935 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 MROH8Q9H579 483 aa24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 RAVER2Q9HCJ3 691 aaKnown RBP24.58■■□□□ 1.53
MAP1LC3A-204ENST00000476428 SLC15A5A6NIM6 579 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 ATP2A1O14983 1001 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 ADCY3O60266 1144 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 GOLGA8HP0CJ92 632 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 ZKSCAN1P17029 563 aaPredicted RBP24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 CYP2B6P20813 491 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 GRK4P32298 578 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 SNAP25P60880 206 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 WTAPQ15007 396 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 SOCS4Q8WXH5 440 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 NEK1Q96PY6 1258 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 TEX13BQ9BXU2 312 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 GPHNQ9NQX3 736 aaPredicted RBP24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 IVNS1ABPQ9Y6Y0 642 aa24.57■■□□□ 1.52
MAP1LC3A-204ENST00000476428 ADCK5Q3MIX3 580 aa24.56■■□□□ 1.52
MAP1LC3A-204ENST00000476428 GPATCH4Q5T3I0 446 aaKnown RBP24.56■■□□□ 1.52
MAP1LC3A-204ENST00000476428 SYDE2Q5VT97 1194 aa24.56■■□□□ 1.52
MAP1LC3A-204ENST00000476428 SNRNP48Q6IEG0 339 aaKnown RBP24.56■■□□□ 1.52
MAP1LC3A-204ENST00000476428 NBPF11Q86T75 865 aa24.56■■□□□ 1.52
MAP1LC3A-204ENST00000476428 PXYLP1Q8TE99 480 aa24.56■■□□□ 1.52
MAP1LC3A-204ENST00000476428 MTA3Q9BTC8 594 aa24.56■■□□□ 1.52
MAP1LC3A-204ENST00000476428 USP26Q9BXU7 913 aa24.56■■□□□ 1.52
MAP1LC3A-204ENST00000476428 RIPK3Q9Y572 518 aa24.56■■□□□ 1.52
MAP1LC3A-204ENST00000476428 A0A0G2JMZ2 1700 aa24.55■■□□□ 1.52
MAP1LC3A-204ENST00000476428 EPB41L2O43491 1005 aaKnown RBP24.55■■□□□ 1.52
MAP1LC3A-204ENST00000476428 STRNO43815 780 aa24.55■■□□□ 1.52
MAP1LC3A-204ENST00000476428 ELNP15502 786 aa24.55■■□□□ 1.52
MAP1LC3A-204ENST00000476428 OAZ1P54368 228 aa24.55■■□□□ 1.52
MAP1LC3A-204ENST00000476428 MAP2K5Q13163 448 aa24.55■■□□□ 1.52
MAP1LC3A-204ENST00000476428 GRB14Q14449 540 aa24.55■■□□□ 1.52
MAP1LC3A-204ENST00000476428 KRT32Q14532 448 aa24.55■■□□□ 1.52
MAP1LC3A-204ENST00000476428 SLAIN1Q8ND83 568 aa24.55■■□□□ 1.52
MAP1LC3A-204ENST00000476428 COPB2P35606 906 aa24.54■■□□□ 1.52
MAP1LC3A-204ENST00000476428 RGS2P41220 211 aa24.54■■□□□ 1.52
MAP1LC3A-204ENST00000476428 SLC4A3P48751 1232 aa24.54■■□□□ 1.52
MAP1LC3A-204ENST00000476428 ZNF333Q96JL9 665 aa24.54■■□□□ 1.52
MAP1LC3A-204ENST00000476428 TMEM87BQ96K49 555 aa24.54■■□□□ 1.52
MAP1LC3A-204ENST00000476428 UBA5Q9GZZ9 404 aa24.54■■□□□ 1.52
MAP1LC3A-204ENST00000476428 LY9Q9HBG7 655 aa24.54■■□□□ 1.52
MAP1LC3A-204ENST00000476428 SNX14Q9Y5W7 946 aa24.54■■□□□ 1.52
MAP1LC3A-204ENST00000476428 ZNF536O15090 1300 aa24.54■■□□□ 1.52
MAP1LC3A-204ENST00000476428 SH2B2O14492 632 aaPredicted RBP24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 PARP1P09874 1014 aaKnown RBP24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 XRCC5P13010 732 aaKnown RBP24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 EXOSC10Q01780 885 aaKnown RBP24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 ASPRV1Q53RT3 343 aa24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 CCDC174Q6PII3 467 aa24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 AGBL1Q96MI9 1066 aa24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 LRRC2Q9BYS8 371 aa24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 RANBP17Q9H2T7 1088 aaKnown RBP24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 CPVLQ9H3G5 476 aa24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 MGAMO43451 1857 aa24.53■■□□□ 1.52
MAP1LC3A-204ENST00000476428 PARP14Q460N5 1801 aa24.52■■□□□ 1.52
MAP1LC3A-204ENST00000476428 ADORA2AP29274 412 aa24.52■■□□□ 1.52
MAP1LC3A-204ENST00000476428 DHX32Q7L7V1 743 aaKnown RBP24.52■■□□□ 1.52
MAP1LC3A-204ENST00000476428 ABRAQ8N0Z2 381 aa24.52■■□□□ 1.52
MAP1LC3A-204ENST00000476428 BIN2Q9UBW5 565 aaPredicted RBP24.52■■□□□ 1.52
MAP1LC3A-204ENST00000476428 FCER1AP12319 257 aa24.51■■□□□ 1.51
MAP1LC3A-204ENST00000476428 TROAPQ12815 778 aa24.51■■□□□ 1.51
MAP1LC3A-204ENST00000476428 TMTC2Q8N394 836 aa24.51■■□□□ 1.51
MAP1LC3A-204ENST00000476428 STAG2Q8N3U4 1231 aa24.51■■□□□ 1.51
MAP1LC3A-204ENST00000476428 MMP19Q99542 508 aa24.51■■□□□ 1.51
MAP1LC3A-204ENST00000476428 APBA2Q99767 749 aa24.51■■□□□ 1.51
MAP1LC3A-204ENST00000476428 PALM3A6NDB9 673 aaPredicted RBP24.5■■□□□ 1.51
MAP1LC3A-204ENST00000476428 COBLO75128 1261 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms