RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-223ENST00000476135 IVNS1ABPQ9Y6Y0 642 aa8.98□□□□□ -0.97
HDAC9-223ENST00000476135 TRANK1O15050 2925 aa8.98□□□□□ -0.97
HDAC9-223ENST00000476135 ZNF236Q9UL36 1845 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 FAM196BA6NMK8 535 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 DCDC2CA8MYV0 355 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 CNMDO75829 334 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 SLC5A1P13866 664 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 FOXC1Q12948 553 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 PICALMQ13492 652 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 RRP1BQ14684 758 aaKnown RBP8.97□□□□□ -0.97
HDAC9-223ENST00000476135 PUM3Q15397 648 aaKnown RBP8.97□□□□□ -0.97
HDAC9-223ENST00000476135 MSS51Q4VC12 460 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 YBX2Q9Y2T7 364 aaKnown RBP8.97□□□□□ -0.97
HDAC9-223ENST00000476135 MTCH2Q9Y6C9 303 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 ZNF521Q96K83 1311 aa8.97□□□□□ -0.97
HDAC9-223ENST00000476135 USP17L10C9JJH3 530 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 ASNSP08243 561 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 ALADP13716 330 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 FAM47AQ5JRC9 791 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 WDR78Q5VTH9 848 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 ZNF365Q70YC5 407 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 RNF180Q86T96 592 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 DPP9Q86TI2 863 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 TMEM199Q8N511 208 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 HLA-CQ95604 372 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 UIMC1Q96RL1 719 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 MTIF3Q9H2K0 278 aaKnown RBP8.96□□□□□ -0.98
HDAC9-223ENST00000476135 CD320Q9NPF0 282 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 C9orf78Q9NZ63 289 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-223ENST00000476135 HERC5Q9UII4 1024 aaKnown RBP8.96□□□□□ -0.98
HDAC9-223ENST00000476135 TBX21Q9UL17 535 aa8.96□□□□□ -0.98
HDAC9-223ENST00000476135 PRRC2BQ5JSZ5 2229 aaKnown RBP8.95□□□□□ -0.98
HDAC9-223ENST00000476135 A0A1W2PQ45 241 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-223ENST00000476135 A0A1W2PQY0 241 aa8.95□□□□□ -0.98
HDAC9-223ENST00000476135 STRNO43815 780 aa8.95□□□□□ -0.98
HDAC9-223ENST00000476135 WDR43Q15061 677 aaKnown RBP eCLIP8.95□□□□□ -0.98
HDAC9-223ENST00000476135 TWISTNBQ3B726 338 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-223ENST00000476135 PPP2R2DQ66LE6 453 aa8.95□□□□□ -0.98
HDAC9-223ENST00000476135 ZGPATQ8N5A5 531 aaKnown RBP8.95□□□□□ -0.98
HDAC9-223ENST00000476135 LPIN2Q92539 896 aa8.95□□□□□ -0.98
HDAC9-223ENST00000476135 XPNPEP3Q9NQH7 507 aa8.95□□□□□ -0.98
HDAC9-223ENST00000476135 GINM1Q9NU53 330 aa8.95□□□□□ -0.98
HDAC9-223ENST00000476135 SMCHD1A6NHR9 2005 aa8.95□□□□□ -0.98
HDAC9-223ENST00000476135 USP17L15C9J2P7 530 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 USP17L13C9JLJ4 530 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 USP17L11C9JVI0 530 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 USP17L18D6R9N7 530 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 USP17L22D6RA61 530 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 USP17L17D6RBQ6 530 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 USP17L19D6RCP7 530 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 USP17L20D6RJB6 530 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 KDM4AO75164 1064 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 CD2BP2O95400 341 aaKnown RBP8.94□□□□□ -0.98
HDAC9-223ENST00000476135 MAP4K4O95819 1239 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-223ENST00000476135 CSF2RAP15509 400 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 BTDP43251 543 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 RHBDL3P58872 404 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 USP17L24Q0WX57 530 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 USP17L2Q6R6M4 530 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 LBX2Q6XYB7 198 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 KAZALD1Q96I82 304 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 SUCLG2Q96I99 432 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 TSEN34Q9BSV6 310 aaKnown RBP8.94□□□□□ -0.98
HDAC9-223ENST00000476135 IL23AQ9NPF7 189 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 GNL3LQ9NVN8 582 aaKnown RBP8.94□□□□□ -0.98
HDAC9-223ENST00000476135 DENND2AQ9ULE3 1009 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 ADAMTS8Q9UP79 889 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 PCDHA11Q9Y5I1 949 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 MROH7Q68CQ1 1323 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 A0A0G2JMZ2 1700 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 WDFY4Q6ZS81 3184 aa8.94□□□□□ -0.98
HDAC9-223ENST00000476135 GPR75-ASB3A0A0A6YYF3 556 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 F6X3S4 739 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 ALDH1L1O75891 902 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 FGBP02675 491 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 ACRP10323 421 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 RARBP10826 455 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 ADORA2AP29274 412 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 RALBP1Q15311 655 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 RABL6Q3YEC7 729 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-223ENST00000476135 PRAMEF19Q5SWL8 479 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 DZIP1Q86YF9 867 aaKnown RBP8.93□□□□□ -0.98
HDAC9-223ENST00000476135 GJD3Q8N144 294 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 NUP133Q8WUM0 1156 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 C12orf42Q96LP6 360 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 STARD7Q9NQZ5 370 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 SLC5A4Q9NY91 659 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 NRBP1Q9UHY1 535 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 MROH7-TTC4A0A0A0MT08 1334 aa8.93□□□□□ -0.98
HDAC9-223ENST00000476135 ZNF318Q5VUA4 2279 aa8.92□□□□□ -0.98
HDAC9-223ENST00000476135 PGK1P00558 417 aa8.92□□□□□ -0.98
HDAC9-223ENST00000476135 CATSPERGQ6ZRH7 1159 aa8.92□□□□□ -0.98
HDAC9-223ENST00000476135 FAM178BQ8IXR5 827 aa8.92□□□□□ -0.98
HDAC9-223ENST00000476135 BTBD7Q9P203 1132 aa8.92□□□□□ -0.98
HDAC9-223ENST00000476135 PI4KBQ9UBF8 816 aa8.92□□□□□ -0.98
HDAC9-223ENST00000476135 SIPA1L1O43166 1804 aa8.91□□□□□ -0.98
HDAC9-223ENST00000476135 ROBO3Q96MS0 1386 aa8.91□□□□□ -0.98
HDAC9-223ENST00000476135 MOXD2PA6NHM9 499 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms