RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 STK11IPQ8N1F8 1099 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 TATDN2Q93075 761 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 NEUROD6Q96NK8 337 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 FOXP1Q9H334 677 aaPredicted RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 PRDM10Q9NQV6 1147 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 ANKIB1Q9P2G1 1089 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 DNAI1Q9UI46 699 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 ANAPC4Q9UJX5 808 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 GGA1Q9UJY5 639 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 FBXO2Q9UK22 296 aaPredicted RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 IQSEC3Q9UPP2 1182 aaPredicted RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 DICER1Q9UPY3 1922 aaKnown RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 A0A1B0GTH6 734 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 RASSF10A6NK89 507 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 PATL2C9JE40 543 aaKnown RBP7.84□□□□□ -1.15
UBR4-212ENST00000475973 ECE2O60344 883 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 PDE8BO95263 885 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 TPM1P09493 284 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 CD46P15529 392 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 DNAJB2P25686 324 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 ERCC5P28715 1186 aaPredicted RBP7.84□□□□□ -1.15
UBR4-212ENST00000475973 CYP2C19P33261 490 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 TPM4P67936 248 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 GPSM2P81274 684 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 FGD1P98174 961 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 PDE4BQ07343 736 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 FUT2Q10981 343 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 PPP2R5BQ15173 497 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 ELF2Q15723 593 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 CCDC57Q2TAC2 916 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 LONRF3Q496Y0 759 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 TTC39AQ5SRH9 613 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 SYNE3Q6ZMZ3 975 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 TMC6Q7Z403 805 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 PACS2Q86VP3 889 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 SULF1Q8IWU6 871 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 TNS4Q8IZW8 715 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 TC2NQ8N9U0 490 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 MLKLQ8NB16 471 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 LRRN4CLQ8ND94 238 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 KIFC2Q96AC6 838 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 ALG1Q9BT22 464 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 ZC3H12CQ9C0D7 883 aaKnown RBP7.84□□□□□ -1.15
UBR4-212ENST00000475973 DBNDD1Q9H9R9 158 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 EPB41L4AQ9HCS5 686 aaPredicted RBP7.84□□□□□ -1.15
UBR4-212ENST00000475973 PIH1D3Q9NQM4 214 aaKnown RBP7.84□□□□□ -1.15
UBR4-212ENST00000475973 GJB4Q9NTQ9 266 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 PCDHA5Q9Y5H7 936 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 SRPRBQ9Y5M8 271 aaKnown RBP7.84□□□□□ -1.15
UBR4-212ENST00000475973 DUOX1Q9NRD9 1551 aa7.84□□□□□ -1.15
UBR4-212ENST00000475973 XDHP47989 1333 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 YDJCA8MPS7 323 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 TULP2O00295 520 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 MAP2K7O14733 419 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 ACTN4O43707 911 aaKnown RBP7.83□□□□□ -1.16
UBR4-212ENST00000475973 MMP1P03956 469 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 POLR3DP05423 398 aaPredicted RBP7.83□□□□□ -1.16
UBR4-212ENST00000475973 UQCRFS1P1P0C7P4 283 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 PNMA6AP0CW24 399 aaPredicted RBP7.83□□□□□ -1.16
UBR4-212ENST00000475973 VEGFBP49765 207 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 UBASH3AP57075 661 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 CUL4BQ13620 913 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 TUBB2AQ13885 445 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 ERCC6LQ2NKX8 1250 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 DEFB115Q30KQ5 88 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 CDKAL1Q5VV42 579 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 CCDC102BQ68D86 513 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 SYT10Q6XYQ8 523 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 NOSTRINQ8IVI9 506 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 TBC1D16Q8TBP0 767 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 STAG1Q8WVM7 1258 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 HNRNPLLQ8WVV9 542 aaKnown RBP7.83□□□□□ -1.16
UBR4-212ENST00000475973 SPIRE2Q8WWL2 714 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 ERCC4Q92889 916 aaPredicted RBP7.83□□□□□ -1.16
UBR4-212ENST00000475973 CCDC85AQ96PX6 553 aaPredicted RBP7.83□□□□□ -1.16
UBR4-212ENST00000475973 PANX2Q96RD6 677 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 TUBB2BQ9BVA1 445 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.83□□□□□ -1.165e-10■■■□□ 17.4
UBR4-212ENST00000475973 SENP2Q9HC62 589 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 SEC31BQ9NQW1 1179 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 TRMT1Q9NXH9 659 aaKnown RBP7.83□□□□□ -1.16
UBR4-212ENST00000475973 PODXL2Q9NZ53 605 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 POLLQ9UGP5 575 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 MAN1B1Q9UKM7 699 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 RAB21Q9UL25 225 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 PNMA3Q9UL41 463 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 KCNH3Q9ULD8 1083 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 DENND2AQ9ULE3 1009 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 ADAMTSL1Q8N6G6 1762 aa7.83□□□□□ -1.16
UBR4-212ENST00000475973 LRRC37AA6NMS7 1700 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 GSG1L2A8MUP6 293 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 PSMD14O00487 310 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 ZSCAN12O43309 604 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 TBC1D8O95759 1140 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 PDE6AP16499 860 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 ATP2B4P23634 1241 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 IGHMBP2P38935 993 aaKnown RBP7.82□□□□□ -1.16
UBR4-212ENST00000475973 USP5P45974 858 aa7.82□□□□□ -1.16
UBR4-212ENST00000475973 CTCFP49711 727 aaPredicted RBP7.82□□□□□ -1.16
UBR4-212ENST00000475973 METAP2P50579 478 aaKnown RBP eCLIP7.82□□□□□ -1.164e-8■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms