RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 SLF1Q9BQI6 1058 aa18.85■□□□□ 0.61
CDPF1-206ENST00000475605 CNPY2Q9Y2B0 182 aa18.85■□□□□ 0.61
CDPF1-206ENST00000475605 ROBO3Q96MS0 1386 aa18.84■□□□□ 0.61
CDPF1-206ENST00000475605 GSG1L2A8MUP6 293 aa18.84■□□□□ 0.61
CDPF1-206ENST00000475605 F5H6K3 240 aa18.84■□□□□ 0.61
CDPF1-206ENST00000475605 KIAA0355O15063 1070 aa18.84■□□□□ 0.61
CDPF1-206ENST00000475605 NDUFB10O96000 172 aa18.84■□□□□ 0.61
CDPF1-206ENST00000475605 RAG1P15918 1043 aa18.84■□□□□ 0.61
CDPF1-206ENST00000475605 KLRC3Q07444 240 aa18.84■□□□□ 0.61
CDPF1-206ENST00000475605 RNPC3Q96LT9 517 aaKnown RBP18.84■□□□□ 0.61
CDPF1-206ENST00000475605 TEX13BQ9BXU2 312 aa18.84■□□□□ 0.61
CDPF1-206ENST00000475605 LRRCC1Q9C099 1032 aa18.84■□□□□ 0.61
CDPF1-206ENST00000475605 SYNRGQ9UMZ2 1314 aa18.83■□□□□ 0.61
CDPF1-206ENST00000475605 MYADML2A6NDP7 307 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 MINDY4BA8MYZ0 360 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 COPB2P35606 906 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 ACLYP53396 1101 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 RRP1P56182 461 aaKnown RBP18.83■□□□□ 0.6
CDPF1-206ENST00000475605 FAAP100Q0VG06 881 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 SBK1Q52WX2 424 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 CPXCR1Q8N123 301 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 KLHDC9Q8NEP7 349 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 DDX11Q96FC9 970 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 MKNK2Q9HBH9 465 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 TMEM39AQ9NV64 488 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 NYAP2Q9P242 653 aa18.83■□□□□ 0.6
CDPF1-206ENST00000475605 DNAJC25-GNG10A0A024R161 153 aa18.82■□□□□ 0.6
CDPF1-206ENST00000475605 KCNA10Q16322 511 aa18.82■□□□□ 0.6
CDPF1-206ENST00000475605 C20orf194Q5TEA3 1177 aa18.82■□□□□ 0.6
CDPF1-206ENST00000475605 OSBP2Q969R2 916 aa18.82■□□□□ 0.6
CDPF1-206ENST00000475605 STARD7Q9NQZ5 370 aa18.82■□□□□ 0.6
CDPF1-206ENST00000475605 CLIP2Q9UDT6 1046 aa18.82■□□□□ 0.6
CDPF1-206ENST00000475605 ZHX1Q9UKY1 873 aaPredicted RBP18.82■□□□□ 0.6
CDPF1-206ENST00000475605 FAM184BQ9ULE4 1060 aa18.82■□□□□ 0.6
CDPF1-206ENST00000475605 ADCY6O43306 1168 aa18.81■□□□□ 0.6
CDPF1-206ENST00000475605 PRDM1O75626 825 aa18.81■□□□□ 0.6
CDPF1-206ENST00000475605 FPGSQ05932 587 aa18.81■□□□□ 0.6
CDPF1-206ENST00000475605 TSHZ3Q63HK5 1081 aa18.81■□□□□ 0.6
CDPF1-206ENST00000475605 CCSAPQ6IQ19 270 aaPredicted RBP18.81■□□□□ 0.6
CDPF1-206ENST00000475605 MAMDC4Q6UXC1 1216 aa18.81■□□□□ 0.6
CDPF1-206ENST00000475605 ANKRD33Q7Z3H0 272 aa18.81■□□□□ 0.6
CDPF1-206ENST00000475605 PRPF38AQ8NAV1 312 aaKnown RBP18.81■□□□□ 0.6
CDPF1-206ENST00000475605 KIFC2Q96AC6 838 aa18.81■□□□□ 0.6
CDPF1-206ENST00000475605 TSEN34Q9BSV6 310 aaKnown RBP18.81■□□□□ 0.6
CDPF1-206ENST00000475605 RAVER2Q9HCJ3 691 aaKnown RBP18.81■□□□□ 0.6
CDPF1-206ENST00000475605 EPB41L4AQ9HCS5 686 aaPredicted RBP18.81■□□□□ 0.6
CDPF1-206ENST00000475605 ECHDC1Q9NTX5 307 aa18.81■□□□□ 0.6
CDPF1-206ENST00000475605 CDH23Q9H251 3354 aa18.81■□□□□ 0.6
CDPF1-206ENST00000475605 SYNGAP1Q96PV0 1343 aa18.8■□□□□ 0.6
CDPF1-206ENST00000475605 IGKV6D-41A0A0C4DH26 115 aa18.8■□□□□ 0.6
CDPF1-206ENST00000475605 FOSL2P15408 326 aa18.8■□□□□ 0.6
CDPF1-206ENST00000475605 MSL3Q8N5Y2 521 aaKnown RBP18.8■□□□□ 0.6
CDPF1-206ENST00000475605 KBTBD3Q8NAB2 608 aa18.8■□□□□ 0.6
CDPF1-206ENST00000475605 FGD4Q96M96 766 aa18.8■□□□□ 0.6
CDPF1-206ENST00000475605 TOX2Q96NM4 488 aa18.8■□□□□ 0.6
CDPF1-206ENST00000475605 DCDC2CA8MYV0 355 aa18.79■□□□□ 0.6
CDPF1-206ENST00000475605 ATP2A1O14983 1001 aa18.79■□□□□ 0.6
CDPF1-206ENST00000475605 ZBED4O75132 1171 aa18.79■□□□□ 0.6
CDPF1-206ENST00000475605 ACVR2BQ13705 512 aa18.79■□□□□ 0.6
CDPF1-206ENST00000475605 GIMAP6Q6P9H5 292 aa18.79■□□□□ 0.6
CDPF1-206ENST00000475605 NUP133Q8WUM0 1156 aa18.79■□□□□ 0.6
CDPF1-206ENST00000475605 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.79■□□□□ 0.6
CDPF1-206ENST00000475605 EYSQ5T1H1 3165 aa18.79■□□□□ 0.6
CDPF1-206ENST00000475605 MYH4Q9Y623 1939 aa18.78■□□□□ 0.6
CDPF1-206ENST00000475605 MOXD2PA6NHM9 499 aa18.78■□□□□ 0.6
CDPF1-206ENST00000475605 M0R2C6 588 aa18.78■□□□□ 0.6
CDPF1-206ENST00000475605 RNF113AO15541 343 aaKnown RBP18.78■□□□□ 0.6
CDPF1-206ENST00000475605 GPAA1O43292 621 aa18.78■□□□□ 0.6
CDPF1-206ENST00000475605 DUSP11O75319 330 aaKnown RBP18.78■□□□□ 0.6
CDPF1-206ENST00000475605 GRIN2CQ14957 1233 aa18.78■□□□□ 0.6
CDPF1-206ENST00000475605 LRRC47Q8N1G4 583 aaKnown RBP18.78■□□□□ 0.6
CDPF1-206ENST00000475605 APPBP2Q92624 585 aa18.78■□□□□ 0.6
CDPF1-206ENST00000475605 CEP95Q96GE4 821 aa18.78■□□□□ 0.6
CDPF1-206ENST00000475605 SLC38A10Q9HBR0 1119 aa18.78■□□□□ 0.6
CDPF1-206ENST00000475605 TBX21Q9UL17 535 aa18.78■□□□□ 0.6
CDPF1-206ENST00000475605 CTDP1Q9Y5B0 961 aaPredicted RBP18.78■□□□□ 0.6
CDPF1-206ENST00000475605 MCM3APO60318 1980 aa18.78■□□□□ 0.6
CDPF1-206ENST00000475605 TIMP1P01033 207 aa18.77■□□□□ 0.6
CDPF1-206ENST00000475605 ASGR1P07306 291 aa18.77■□□□□ 0.6
CDPF1-206ENST00000475605 C6orf222P0C671 652 aaPredicted RBP18.77■□□□□ 0.6
CDPF1-206ENST00000475605 CCDC144BQ3MJ40 725 aa18.77■□□□□ 0.6
CDPF1-206ENST00000475605 ZNF467Q7Z7K2 595 aaPredicted RBP18.77■□□□□ 0.6
CDPF1-206ENST00000475605 ANKRD35Q8N283 1001 aa18.77■□□□□ 0.6
CDPF1-206ENST00000475605 MKL1Q969V6 931 aa18.77■□□□□ 0.6
CDPF1-206ENST00000475605 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.77■□□□□ 0.6
CDPF1-206ENST00000475605 MTMR4Q9NYA4 1195 aa18.77■□□□□ 0.6
CDPF1-206ENST00000475605 VCANP13611 3396 aa18.76■□□□□ 0.59
CDPF1-206ENST00000475605 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.76■□□□□ 0.59
CDPF1-206ENST00000475605 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.76■□□□□ 0.59
CDPF1-206ENST00000475605 APPP05067 770 aa18.76■□□□□ 0.59
CDPF1-206ENST00000475605 DNAJB2P25686 324 aa18.76■□□□□ 0.59
CDPF1-206ENST00000475605 CST5P28325 142 aaPredicted RBP18.76■□□□□ 0.59
CDPF1-206ENST00000475605 TDO2P48775 406 aa18.76■□□□□ 0.59
CDPF1-206ENST00000475605 CDK7P50613 346 aa18.76■□□□□ 0.59
CDPF1-206ENST00000475605 C16orf59Q7L2K0 433 aa18.76■□□□□ 0.59
CDPF1-206ENST00000475605 ARMCX2Q7L311 632 aa18.76■□□□□ 0.59
CDPF1-206ENST00000475605 ZNF444Q8N0Y2 327 aaPredicted RBP18.76■□□□□ 0.59
CDPF1-206ENST00000475605 CHMP4CQ96CF2 233 aa18.76■□□□□ 0.59
CDPF1-206ENST00000475605 GLT1D1Q96MS3 346 aa18.76■□□□□ 0.59
CDPF1-206ENST00000475605 FEM1BQ9UK73 627 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms