RNA–Protein interactions for RNA: ENST00000475495.1

TRAIP-205, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-205ENST00000475495 PRPF38AQ8NAV1 312 aaKnown RBP11.84□□□□□ -0.51
TRAIP-205ENST00000475495 GPRC5AQ8NFJ5 357 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 IGDCC4Q8TDY8 1250 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 IL17RAQ96F46 866 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 NUP88Q99567 741 aaPredicted RBP11.84□□□□□ -0.51
TRAIP-205ENST00000475495 SLF1Q9BQI6 1058 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 RBPJLQ9UBG7 517 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 MORF4L1Q9UBU8 362 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 PPP1R9AQ9ULJ8 1098 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 MTMR7Q9Y216 660 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 SNX14Q9Y5W7 946 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 MYH6P13533 1939 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 WDR19Q8NEZ3 1342 aa11.84□□□□□ -0.51
TRAIP-205ENST00000475495 BAZ2BQ9UIF8 2168 aaKnown RBP11.84□□□□□ -0.51
TRAIP-205ENST00000475495 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 TMEM232C9JQI7 657 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 GNRH1P01148 92 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 FDX1P10109 184 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 PDHBP11177 359 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 STAT2P52630 851 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 ANTXR2P58335 489 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 ERVK-9P63128 1117 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 ERVK-24P63145 666 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 CCNA1P78396 465 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 IKQ13123 557 aaPredicted RBP11.83□□□□□ -0.52
TRAIP-205ENST00000475495 CCDC96Q2M329 555 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 ADCK5Q3MIX3 580 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 GPATCH4Q5T3I0 446 aaKnown RBP11.83□□□□□ -0.52
TRAIP-205ENST00000475495 CLEC17AQ6ZS10 378 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 DHX32Q7L7V1 743 aaKnown RBP11.83□□□□□ -0.52
TRAIP-205ENST00000475495 CHST3Q7LGC8 479 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 PAGR1Q9BTK6 254 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 ADAMTS5Q9UNA0 930 aa11.83□□□□□ -0.52
TRAIP-205ENST00000475495 ZNFX1Q9P2E3 1918 aaKnown RBP11.83□□□□□ -0.52
TRAIP-205ENST00000475495 VWA5AO00534 786 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 SNHG28P0DPA3 235 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 HOXD10P28358 340 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 LIFRP42702 1097 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 FCGRTP55899 365 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 EXOSC10Q01780 885 aaKnown RBP11.82□□□□□ -0.52
TRAIP-205ENST00000475495 ZNF543Q08ER8 600 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 BLOC1S2Q6QNY1 142 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 KCTD1Q719H9 257 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 CTU1Q7Z7A3 348 aaKnown RBP11.82□□□□□ -0.52
TRAIP-205ENST00000475495 CATIPQ7Z7H3 387 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 CCAR1Q8IX12 1150 aaKnown RBP11.82□□□□□ -0.52
TRAIP-205ENST00000475495 TNS4Q8IZW8 715 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 CD99L2Q8TCZ2 262 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 ATG4CQ96DT6 458 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 JAKMIP1Q96N16 626 aaKnown RBP11.82□□□□□ -0.52
TRAIP-205ENST00000475495 LY9Q9HBG7 655 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 TXNRD2Q9NNW7 524 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 FBXO28Q9NVF7 368 aa11.82□□□□□ -0.52
TRAIP-205ENST00000475495 CTDP1Q9Y5B0 961 aaPredicted RBP11.82□□□□□ -0.52
TRAIP-205ENST00000475495 A0A0G2JMZ2 1700 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 SH2B2O14492 632 aaPredicted RBP11.81□□□□□ -0.52
TRAIP-205ENST00000475495 ZBED4O75132 1171 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 CNMDO75829 334 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 FMNL1O95466 1100 aaPredicted RBP11.81□□□□□ -0.52
TRAIP-205ENST00000475495 PARP1P09874 1014 aaKnown RBP11.81□□□□□ -0.52
TRAIP-205ENST00000475495 MAPK4P31152 587 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 PSMC4P43686 418 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 PKN2Q16513 984 aaKnown RBP11.81□□□□□ -0.52
TRAIP-205ENST00000475495 ASPRV1Q53RT3 343 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 POTEEQ6S8J3 1075 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 BTNL9Q6UXG8 535 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 NFXL1Q6ZNB6 911 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 KIFC2Q96AC6 838 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 TM6SF1Q9BZW5 370 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 EFCC1Q9HA90 598 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 BTBD7Q9P203 1132 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 SMCHD1A6NHR9 2005 aa11.81□□□□□ -0.52
TRAIP-205ENST00000475495 CCDC69A6NI79 296 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 CASTP20810 708 aaKnown RBP11.8□□□□□ -0.52
TRAIP-205ENST00000475495 COPB2P35606 906 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 PRMT2P55345 433 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 FGD1P98174 961 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 PLS1Q14651 629 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 Q3C1V9 767 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 COA7Q96BR5 231 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 TRIM47Q96LD4 638 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 MAP3K14Q99558 947 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 SPATC1LQ9H0A9 340 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 SLC38A10Q9HBR0 1119 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 GPCPD1Q9NPB8 672 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 TRIM17Q9Y577 477 aa11.8□□□□□ -0.52
TRAIP-205ENST00000475495 FRMPD2Q68DX3 1309 aaPredicted RBP11.8□□□□□ -0.52
TRAIP-205ENST00000475495 ZSWIM8A7E2V4 1837 aa11.79□□□□□ -0.52
TRAIP-205ENST00000475495 TNPO2O14787 897 aaKnown RBP11.79□□□□□ -0.52
TRAIP-205ENST00000475495 ATP2A1O14983 1001 aa11.79□□□□□ -0.52
TRAIP-205ENST00000475495 TRAK2O60296 914 aa11.79□□□□□ -0.52
TRAIP-205ENST00000475495 DDAH1O94760 285 aa11.79□□□□□ -0.52
TRAIP-205ENST00000475495 SLC25A27O95847 323 aa11.79□□□□□ -0.52
TRAIP-205ENST00000475495 CALM1P0DP23 149 aa11.79□□□□□ -0.52
TRAIP-205ENST00000475495 CALM2P0DP24 149 aa11.79□□□□□ -0.52
TRAIP-205ENST00000475495 CALM3P0DP25 149 aa11.79□□□□□ -0.52
TRAIP-205ENST00000475495 RPS6KB1P23443 525 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms