RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 SNRNP48Q6IEG0 339 aaKnown RBP18.69■□□□□ 0.58
SRRT-209ENST00000474896 TEX13BQ9BXU2 312 aa18.69■□□□□ 0.58
SRRT-209ENST00000474896 ECHDC1Q9NTX5 307 aa18.69■□□□□ 0.58
SRRT-209ENST00000474896 CLIP2Q9UDT6 1046 aa18.69■□□□□ 0.58
SRRT-209ENST00000474896 RIPK3Q9Y572 518 aa18.69■□□□□ 0.58
SRRT-209ENST00000474896 KIAA0355O15063 1070 aa18.68■□□□□ 0.58
SRRT-209ENST00000474896 SNAI1O95863 264 aaPredicted RBP18.68■□□□□ 0.58
SRRT-209ENST00000474896 NDUFB10O96000 172 aa18.68■□□□□ 0.58
SRRT-209ENST00000474896 RAG1P15918 1043 aa18.68■□□□□ 0.58
SRRT-209ENST00000474896 GIMAP6Q6P9H5 292 aa18.68■□□□□ 0.58
SRRT-209ENST00000474896 CPXCR1Q8N123 301 aa18.68■□□□□ 0.58
SRRT-209ENST00000474896 MSL3Q8N5Y2 521 aaKnown RBP18.68■□□□□ 0.58
SRRT-209ENST00000474896 PRPF38AQ8NAV1 312 aaKnown RBP18.68■□□□□ 0.58
SRRT-209ENST00000474896 OSBP2Q969R2 916 aa18.68■□□□□ 0.58
SRRT-209ENST00000474896 TSEN34Q9BSV6 310 aaKnown RBP18.68■□□□□ 0.58
SRRT-209ENST00000474896 TMEM39AQ9NV64 488 aa18.68■□□□□ 0.58
SRRT-209ENST00000474896 FAM184BQ9ULE4 1060 aa18.68■□□□□ 0.58
SRRT-209ENST00000474896 ZBED4O75132 1171 aa18.67■□□□□ 0.58
SRRT-209ENST00000474896 ADAMTS4O75173 837 aa18.67■□□□□ 0.58
SRRT-209ENST00000474896 ACLYP53396 1101 aa18.67■□□□□ 0.58
SRRT-209ENST00000474896 EPHB4P54760 987 aa18.67■□□□□ 0.58
SRRT-209ENST00000474896 C20orf194Q5TEA3 1177 aa18.67■□□□□ 0.58
SRRT-209ENST00000474896 ZNF444Q8N0Y2 327 aaPredicted RBP18.67■□□□□ 0.58
SRRT-209ENST00000474896 KBTBD3Q8NAB2 608 aa18.67■□□□□ 0.58
SRRT-209ENST00000474896 TTYH1Q9H313 450 aaPredicted RBP18.67■□□□□ 0.58
SRRT-209ENST00000474896 CTDP1Q9Y5B0 961 aaPredicted RBP18.67■□□□□ 0.58
SRRT-209ENST00000474896 LAMA2P24043 3122 aaKnown RBP18.66■□□□□ 0.58
SRRT-209ENST00000474896 DNAJC25-GNG10A0A024R161 153 aa18.66■□□□□ 0.58
SRRT-209ENST00000474896 DCDC2CA8MYV0 355 aa18.66■□□□□ 0.58
SRRT-209ENST00000474896 RNF113AO15541 343 aaKnown RBP18.66■□□□□ 0.58
SRRT-209ENST00000474896 KCNA10Q16322 511 aa18.66■□□□□ 0.58
SRRT-209ENST00000474896 MAMDC4Q6UXC1 1216 aa18.66■□□□□ 0.58
SRRT-209ENST00000474896 KLHDC9Q8NEP7 349 aa18.66■□□□□ 0.58
SRRT-209ENST00000474896 NUP133Q8WUM0 1156 aa18.66■□□□□ 0.58
SRRT-209ENST00000474896 APPBP2Q92624 585 aa18.66■□□□□ 0.58
SRRT-209ENST00000474896 KIFC2Q96AC6 838 aa18.66■□□□□ 0.58
SRRT-209ENST00000474896 RNPC3Q96LT9 517 aaKnown RBP18.66■□□□□ 0.58
SRRT-209ENST00000474896 RAVER2Q9HCJ3 691 aaKnown RBP18.66■□□□□ 0.58
SRRT-209ENST00000474896 STARD7Q9NQZ5 370 aa18.66■□□□□ 0.58
SRRT-209ENST00000474896 ZHX1Q9UKY1 873 aaPredicted RBP18.66■□□□□ 0.58
SRRT-209ENST00000474896 SYNGAP1Q96PV0 1343 aa18.66■□□□□ 0.58
SRRT-209ENST00000474896 ATP2A1O14983 1001 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 PRDM1O75626 825 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 APPP05067 770 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 CENPBP07199 599 aaPredicted RBP18.65■□□□□ 0.58
SRRT-209ENST00000474896 RRP1P56182 461 aaKnown RBP18.65■□□□□ 0.58
SRRT-209ENST00000474896 FPGSQ05932 587 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 FAAP100Q0VG06 881 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 ANKRD33Q7Z3H0 272 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 MAFAQ8NHW3 353 aaPredicted RBP18.65■□□□□ 0.58
SRRT-209ENST00000474896 MYLIPQ8WY64 445 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 MKL1Q969V6 931 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 TOX2Q96NM4 488 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 SYNRGQ9UMZ2 1314 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 ROBO3Q96MS0 1386 aa18.65■□□□□ 0.58
SRRT-209ENST00000474896 GREB1LQ9C091 1923 aaPredicted RBP18.64■□□□□ 0.58
SRRT-209ENST00000474896 IGKV6D-41A0A0C4DH26 115 aa18.64■□□□□ 0.57
SRRT-209ENST00000474896 MOXD2PA6NHM9 499 aa18.64■□□□□ 0.57
SRRT-209ENST00000474896 GPAA1O43292 621 aa18.64■□□□□ 0.57
SRRT-209ENST00000474896 DUSP11O75319 330 aaKnown RBP18.64■□□□□ 0.57
SRRT-209ENST00000474896 TDO2P48775 406 aa18.64■□□□□ 0.57
SRRT-209ENST00000474896 ACVR2BQ13705 512 aa18.64■□□□□ 0.57
SRRT-209ENST00000474896 TSHZ3Q63HK5 1081 aa18.64■□□□□ 0.57
SRRT-209ENST00000474896 CCSAPQ6IQ19 270 aaPredicted RBP18.64■□□□□ 0.57
SRRT-209ENST00000474896 ANKRD35Q8N283 1001 aa18.64■□□□□ 0.57
SRRT-209ENST00000474896 CEP95Q96GE4 821 aa18.64■□□□□ 0.57
SRRT-209ENST00000474896 ZNF287Q9HBT7 754 aa18.64■□□□□ 0.57
SRRT-209ENST00000474896 FEM1BQ9UK73 627 aa18.64■□□□□ 0.57
SRRT-209ENST00000474896 UNC80Q8N2C7 3258 aa18.63■□□□□ 0.57
SRRT-209ENST00000474896 MYADML2A6NDP7 307 aa18.63■□□□□ 0.57
SRRT-209ENST00000474896 GNAT2P19087 354 aa18.63■□□□□ 0.57
SRRT-209ENST00000474896 IRX5P78411 483 aaPredicted RBP18.63■□□□□ 0.57
SRRT-209ENST00000474896 ZNF467Q7Z7K2 595 aaPredicted RBP18.63■□□□□ 0.57
SRRT-209ENST00000474896 VTI1AQ96AJ9 217 aa18.63■□□□□ 0.57
SRRT-209ENST00000474896 GPATCH3Q96I76 525 aa18.63■□□□□ 0.57
SRRT-209ENST00000474896 DCTPP1Q9H773 170 aa18.63■□□□□ 0.57
SRRT-209ENST00000474896 SLC38A10Q9HBR0 1119 aa18.63■□□□□ 0.57
SRRT-209ENST00000474896 EPB41L4AQ9HCS5 686 aaPredicted RBP18.63■□□□□ 0.57
SRRT-209ENST00000474896 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.63■□□□□ 0.57
SRRT-209ENST00000474896 MTMR4Q9NYA4 1195 aa18.63■□□□□ 0.57
SRRT-209ENST00000474896 PATL2C9JE40 543 aaKnown RBP18.62■□□□□ 0.57
SRRT-209ENST00000474896 M0R2C6 588 aa18.62■□□□□ 0.57
SRRT-209ENST00000474896 ZFYP08048 801 aaPredicted RBP18.62■□□□□ 0.57
SRRT-209ENST00000474896 C6orf222P0C671 652 aaPredicted RBP18.62■□□□□ 0.57
SRRT-209ENST00000474896 IFNL3Q8IZI9 196 aa18.62■□□□□ 0.57
SRRT-209ENST00000474896 MYH4Q9Y623 1939 aa18.61■□□□□ 0.57
SRRT-209ENST00000474896 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.61■□□□□ 0.57
SRRT-209ENST00000474896 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.61■□□□□ 0.57
SRRT-209ENST00000474896 TTLL1O95922 423 aa18.61■□□□□ 0.57
SRRT-209ENST00000474896 TIMP1P01033 207 aa18.61■□□□□ 0.57
SRRT-209ENST00000474896 CCDC144BQ3MJ40 725 aa18.61■□□□□ 0.57
SRRT-209ENST00000474896 SLFN13Q68D06 897 aa18.61■□□□□ 0.57
SRRT-209ENST00000474896 LRRC47Q8N1G4 583 aaKnown RBP18.61■□□□□ 0.57
SRRT-209ENST00000474896 PCSK9Q8NBP7 692 aaKnown RBP18.61■□□□□ 0.57
SRRT-209ENST00000474896 CHST13Q8NET6 341 aa18.61■□□□□ 0.57
SRRT-209ENST00000474896 GLT1D1Q96MS3 346 aa18.61■□□□□ 0.57
SRRT-209ENST00000474896 ABHD16BQ9H3Z7 469 aa18.61■□□□□ 0.57
SRRT-209ENST00000474896 SPC25Q9HBM1 224 aa18.61■□□□□ 0.57
SRRT-209ENST00000474896 FBXO40Q9UH90 709 aa18.61■□□□□ 0.57
SRRT-209ENST00000474896 SUPT16HQ9Y5B9 1047 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms