RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 TRAPPC11Q7Z392 1133 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 ATG9AQ7Z3C6 839 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 ZNF572Q7Z3I7 529 aaPredicted RBP9□□□□□ -0.97
CCDC93-208ENST00000474546 MICALL1Q8N3F8 863 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 TRIM58Q8NG06 486 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 DPF2Q92785 391 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 ALS2CR12Q96Q35 445 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 NUP88Q99567 741 aaPredicted RBP9□□□□□ -0.97
CCDC93-208ENST00000474546 PAGR1Q9BTK6 254 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 TEX13AQ9BXU3 409 aaPredicted RBP9□□□□□ -0.97
CCDC93-208ENST00000474546 LZTFL1Q9NQ48 299 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 ABHD10Q9NUJ1 306 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 INTS13Q9NVM9 706 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 GOLGA6AQ9NYA3 693 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 MAGEC2Q9UBF1 373 aaPredicted RBP9□□□□□ -0.97
CCDC93-208ENST00000474546 FBXO2Q9UK22 296 aaPredicted RBP9□□□□□ -0.97
CCDC93-208ENST00000474546 SYNGAP1Q96PV0 1343 aa9□□□□□ -0.97
CCDC93-208ENST00000474546 GOLGA6L7A0A1B0GV03 622 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 BICDL2A1A5D9 508 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 N4BP3O15049 544 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 POLR2DO15514 142 aaKnown RBP8.99□□□□□ -0.97
CCDC93-208ENST00000474546 GPAA1O43292 621 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 KCNQ3O43525 872 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
CCDC93-208ENST00000474546 FGFR1OPO95684 399 aaKnown RBP8.99□□□□□ -0.97
CCDC93-208ENST00000474546 ANXA1P04083 346 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 DNM2P50570 870 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 FOSBP53539 338 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 EPHB4P54760 987 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 ADKP55263 362 aaKnown RBP8.99□□□□□ -0.97
CCDC93-208ENST00000474546 FOXO4P98177 505 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 AMPD2Q01433 879 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 RBL2Q08999 1139 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 FIGNQ5HY92 759 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 TMEM67Q5HYA8 995 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 ARL6IP4Q66PJ3 421 aaKnown RBP8.99□□□□□ -0.97
CCDC93-208ENST00000474546 MMGT1Q8N4V1 131 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 USHBP1Q8N6Y0 703 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 LRRN4CLQ8ND94 238 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 OSBP2Q969R2 916 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 SEC62Q99442 399 aaKnown RBP8.99□□□□□ -0.97
CCDC93-208ENST00000474546 NUCKS1Q9H1E3 243 aaKnown RBP8.99□□□□□ -0.97
CCDC93-208ENST00000474546 THAP9Q9H5L6 903 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 SAGE1Q9NXZ1 904 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 STXBP5LQ9Y2K9 1186 aa8.99□□□□□ -0.97
CCDC93-208ENST00000474546 LUC7L2Q9Y383 392 aaKnown RBP8.99□□□□□ -0.97
CCDC93-208ENST00000474546 EPN1Q9Y6I3 576 aaPredicted RBP8.99□□□□□ -0.97
CCDC93-208ENST00000474546 TRPM7Q96QT4 1865 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 A0A1W2PQJ5 194 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 KIF28PB7ZC32 967 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 TMEM232C9JQI7 657 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 M0R2C6 588 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 LAD1O00515 517 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 CLGNO14967 610 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 GTPBP6O43824 516 aaPredicted RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 HSF2BPO75031 334 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 TACC1O75410 805 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 NDUFA10O95299 355 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 CSB-PGBD3P0DP91 1061 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 MYL6BP14649 208 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 PHKG2P15735 406 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 INPP5BP32019 993 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 RDXP35241 583 aaKnown RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 ADD2P35612 726 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 PAFAH1B1P43034 410 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 ANTXR2P58335 489 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 VSNL1P62760 191 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 SKOR1P84550 965 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 DDR1Q08345 913 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 PAK1Q13153 545 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 CUL4BQ13620 913 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 KARSQ15046 597 aaKnown RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 SPA17Q15506 151 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 RTN1Q16799 776 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 EPHA10Q5JZY3 1008 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 EMC10Q5UCC4 262 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 LRRC31Q6UY01 552 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 SMIM5Q71RC9 77 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 SH3RF1Q7Z6J0 888 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 TEX2Q8IWB9 1127 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 DIS3L2Q8IYB7 885 aaKnown RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 SLC35F6Q8N357 371 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 CAGE1Q8TC20 777 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 SYTL4Q96C24 671 aaPredicted RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 EDC3Q96F86 508 aaKnown RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 DNAJC7Q99615 494 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 CAPS2Q9BXY5 557 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 EDEM3Q9BZQ6 932 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 TAF1DQ9H5J8 278 aaPredicted RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 ACTR5Q9H9F9 607 aaPredicted RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 MRPL44Q9H9J2 332 aaKnown RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 ZCCHC17Q9NP64 241 aaKnown RBP8.98□□□□□ -0.97
CCDC93-208ENST00000474546 HPCAL4Q9UM19 191 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 CLEC11AQ9Y240 323 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 ABCB11O95342 1321 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 UBN2Q6ZU65 1347 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 CDHR2Q9BYE9 1310 aa8.98□□□□□ -0.97
CCDC93-208ENST00000474546 SOWAHDA6NJG2 315 aa8.97□□□□□ -0.97
CCDC93-208ENST00000474546 PSMA7O14818 248 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms