RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 NCAPD3P42695 1498 aa3.92□□□□□ -1.78
UBR3-208ENST00000474426 PLOD2O00469 737 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 SGSM2O43147 1006 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 KCNQ2O43526 872 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 AKAP10O43572 662 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 ALAS1P13196 640 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 ALOX15P16050 662 aaPredicted RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 CDC25CP30307 473 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 GTF2A2P52657 109 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 CRYMQ14894 314 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 SYCP1Q15431 976 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 MAJINQ3KP22 176 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 TATDN1Q6P1N9 297 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 TMCO3Q6UWJ1 677 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 NANOGNBQ7Z5D8 188 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 PDCL2Q8N4E4 241 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 CCDC148Q8NFR7 591 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 VPS50Q96JG6 964 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 NAP1L3Q99457 506 aaPredicted RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 DNAJC18Q9H819 358 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 ATAD2BQ9ULI0 1458 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 FAM170AA1A519 330 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 M0R2C6 588 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 ZBTB39O15060 712 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 LSM1O15116 133 aaKnown RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 HOXC11O43248 304 aaPredicted RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 PLOD3O60568 738 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 TMCC2O75069 709 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 TMEM127O75204 238 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 CTNNA1P35221 906 aaKnown RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 TUBA1BP68363 451 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 KLHL30Q0D2K2 578 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 DPYSQ14117 519 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 SEMA3AQ14563 771 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 HS1BP3Q53T59 392 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 BNC2Q6ZN30 1099 aaPredicted RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 TUBA1AQ71U36 451 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 RAB11FIP4Q86YS3 637 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 COLGALT2Q8IYK4 626 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 ASB16Q96NS5 453 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.91□□□□□ -1.78
UBR3-208ENST00000474426 PCDH10Q9P2E7 1040 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 PDP2Q9P2J9 529 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 CCDC39Q9UFE4 941 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 EIF2B4Q9UI10 523 aaKnown RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 CTNNA3Q9UI47 895 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 SLC12A8A0AV02 714 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 GNAT3A8MTJ3 354 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 CYP27B1O15528 508 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 TSPAN1O60635 241 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 PPP1R37O75864 691 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 P4HBP07237 508 aaKnown RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 IFIT2P09913 472 aaKnown RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 GRK2P25098 689 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 TMF1P82094 1093 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 CDK17Q00537 523 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 FAM69CQ0P6D2 419 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 ANKRD1Q15327 319 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 KRT71Q3SY84 523 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 Q4G0T1 1027 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 CRTC1Q6UUV9 634 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 RSRC2Q7L4I2 434 aaKnown RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 TBC1D1Q86TI0 1168 aaPredicted RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 FAM26EQ8N5C1 309 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 SCG3Q8WXD2 468 aaKnown RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 ARHGAP45Q92619 1136 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 DPF3Q92784 378 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 BTBD6Q96KE9 485 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 SMARCAD1Q9H4L7 1026 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 GPHNQ9NQX3 736 aaPredicted RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 FAM53CQ9NYF3 392 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 NOB1Q9ULX3 412 aaKnown RBP3.91□□□□□ -1.78
UBR3-208ENST00000474426 DGKBQ9Y6T7 804 aa3.91□□□□□ -1.78
UBR3-208ENST00000474426 TRAV6A0A075B6T7 132 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 C17orf113A0A1B0GUU1 675 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 hCG_1642624A0A1W2PR95 340 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 SPDYE3A6NKU9 549 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 K7ENM7 598 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 GNPATO15228 680 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 CPP00450 1065 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 RPS2P15880 293 aaKnown RBP3.9□□□□□ -1.78
UBR3-208ENST00000474426 ELF1P32519 619 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 MAGEA9P43362 315 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 SLC12A2P55011 1212 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 B2MP61769 119 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 SGCGQ13326 291 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 SETMARQ53H47 684 aaPredicted RBP3.9□□□□□ -1.78
UBR3-208ENST00000474426 MEX3CQ5U5Q3 659 aaKnown RBP3.9□□□□□ -1.78
UBR3-208ENST00000474426 CEP135Q66GS9 1140 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 THOC7Q6I9Y2 204 aaKnown RBP3.9□□□□□ -1.78
UBR3-208ENST00000474426 B4GALNT3Q6L9W6 998 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 LRRC31Q6UY01 552 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 ZNF600Q6ZNG1 722 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 ATG9AQ7Z3C6 839 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 RSPH3Q86UC2 560 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 CCDC84Q86UT8 332 aaPredicted RBP3.9□□□□□ -1.78
UBR3-208ENST00000474426 SYTL1Q8IYJ3 562 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 MSANTD4Q8NCY6 345 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 PRIMPOLQ96LW4 560 aa3.9□□□□□ -1.78
UBR3-208ENST00000474426 AIPL1Q9NZN9 384 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms