RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 NCAPG2Q86XI2 1143 aa21.21■□□□□ 0.99
EFNA1-204ENST00000474413 CCAR1Q8IX12 1150 aaKnown RBP21.21■□□□□ 0.99
EFNA1-204ENST00000474413 RUFY2Q8WXA3 655 aa21.21■□□□□ 0.99
EFNA1-204ENST00000474413 ESR2Q92731 530 aa21.21■□□□□ 0.99
EFNA1-204ENST00000474413 TMEM106CQ9BVX2 250 aa21.21■□□□□ 0.99
EFNA1-204ENST00000474413 LSG1Q9H089 658 aaKnown RBP21.21■□□□□ 0.99
EFNA1-204ENST00000474413 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.21■□□□□ 0.992e-6■■□□□ 12.8
EFNA1-204ENST00000474413 MROH8Q9H579 483 aa21.21■□□□□ 0.99
EFNA1-204ENST00000474413 ZNF536O15090 1300 aa21.21■□□□□ 0.99
EFNA1-204ENST00000474413 PLXNA1Q9UIW2 1896 aa21.2■□□□□ 0.98
EFNA1-204ENST00000474413 ATP2A1O14983 1001 aa21.2■□□□□ 0.98
EFNA1-204ENST00000474413 ZKSCAN1P17029 563 aaPredicted RBP21.2■□□□□ 0.98
EFNA1-204ENST00000474413 STAT3P40763 770 aa21.2■□□□□ 0.98
EFNA1-204ENST00000474413 PPP4R3BQ5MIZ7 849 aa21.2■□□□□ 0.98
EFNA1-204ENST00000474413 ESYT1Q9BSJ8 1104 aa21.2■□□□□ 0.98
EFNA1-204ENST00000474413 CTNNA3Q9UI47 895 aa21.2■□□□□ 0.98
EFNA1-204ENST00000474413 ZNFX1Q9P2E3 1918 aaKnown RBP21.19■□□□□ 0.98
EFNA1-204ENST00000474413 SNHG28P0DPA3 235 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 PDHBP11177 359 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 PRKAR2AP13861 404 aaKnown RBP21.19■□□□□ 0.98
EFNA1-204ENST00000474413 TAL1P17542 331 aaPredicted RBP21.19■□□□□ 0.98
EFNA1-204ENST00000474413 STAT2P52630 851 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 CACNB2Q08289 660 aaPredicted RBP21.19■□□□□ 0.98
EFNA1-204ENST00000474413 TTBK2Q6IQ55 1244 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 CYB5R4Q7L1T6 521 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 ABRAQ8N0Z2 381 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 ENAHQ8N8S7 591 aaPredicted RBP21.19■□□□□ 0.98
EFNA1-204ENST00000474413 U2AF1L4Q8WU68 220 aaKnown RBP21.19■□□□□ 0.98
EFNA1-204ENST00000474413 MAP4K1Q92918 833 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 TEX13BQ9BXU2 312 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 RAVER2Q9HCJ3 691 aaKnown RBP21.19■□□□□ 0.98
EFNA1-204ENST00000474413 ZSWIM5Q9P217 1185 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 MTMR7Q9Y216 660 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 LCTP09848 1927 aa21.19■□□□□ 0.98
EFNA1-204ENST00000474413 PLA2G6O60733 806 aa21.18■□□□□ 0.98
EFNA1-204ENST00000474413 SLC25A27O95847 323 aa21.18■□□□□ 0.98
EFNA1-204ENST00000474413 SNAP25P60880 206 aa21.18■□□□□ 0.98
EFNA1-204ENST00000474413 SNRNP48Q6IEG0 339 aaKnown RBP21.18■□□□□ 0.98
EFNA1-204ENST00000474413 TRPV1Q8NER1 839 aa21.18■□□□□ 0.98
EFNA1-204ENST00000474413 DCAF4Q8WV16 495 aa21.18■□□□□ 0.98
EFNA1-204ENST00000474413 DEFB118Q96PH6 123 aa21.18■□□□□ 0.98
EFNA1-204ENST00000474413 CRISPLD2Q9H0B8 497 aa21.18■□□□□ 0.98
EFNA1-204ENST00000474413 CWC22Q9HCG8 908 aaKnown RBP21.18■□□□□ 0.98
EFNA1-204ENST00000474413 PRR12Q9ULL5 1215 aa21.18■□□□□ 0.98
EFNA1-204ENST00000474413 RBM8AQ9Y5S9 174 aaKnown RBP21.18■□□□□ 0.98
EFNA1-204ENST00000474413 IVNS1ABPQ9Y6Y0 642 aa21.18■□□□□ 0.98
EFNA1-204ENST00000474413 U3KPZ7 1027 aaPredicted RBP21.18■□□□□ 0.98
EFNA1-204ENST00000474413 FRMPD2Q68DX3 1309 aaPredicted RBP21.18■□□□□ 0.98
EFNA1-204ENST00000474413 CCND3P30281 292 aaPredicted RBP21.17■□□□□ 0.98
EFNA1-204ENST00000474413 ANKS1AQ92625 1134 aa21.17■□□□□ 0.98
EFNA1-204ENST00000474413 TNKSO95271 1327 aa21.17■□□□□ 0.98
EFNA1-204ENST00000474413 SMCHD1A6NHR9 2005 aa21.17■□□□□ 0.98
EFNA1-204ENST00000474413 RPTORQ8N122 1335 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 STRNO43815 780 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 SGPL1O95470 568 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 PGK2P07205 417 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 CYP2C19P33261 490 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 SLC16A2P36021 539 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 MNX1P50219 401 aaPredicted RBP21.16■□□□□ 0.98
EFNA1-204ENST00000474413 SEC23AQ15436 765 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 CCDC96Q2M329 555 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 BTNL9Q6UXG8 535 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.16■□□□□ 0.98
EFNA1-204ENST00000474413 FAM160B2Q86V87 743 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 DGKHQ86XP1 1220 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 CPXCR1Q8N123 301 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 FGD4Q96M96 766 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 TTC14Q96N46 770 aa21.16■□□□□ 0.98
EFNA1-204ENST00000474413 ZSCAN10Q96SZ4 725 aaPredicted RBP21.16■□□□□ 0.98
EFNA1-204ENST00000474413 LRRC37A2A6NM11 1700 aa21.15■□□□□ 0.98
EFNA1-204ENST00000474413 FCER1AP12319 257 aa21.15■□□□□ 0.98
EFNA1-204ENST00000474413 NT5C2P49902 561 aa21.15■□□□□ 0.98
EFNA1-204ENST00000474413 ZNF543Q08ER8 600 aa21.15■□□□□ 0.98
EFNA1-204ENST00000474413 TRMT44Q8IYL2 757 aaKnown RBP21.15■□□□□ 0.98
EFNA1-204ENST00000474413 MAML3Q96JK9 1138 aa21.15■□□□□ 0.98
EFNA1-204ENST00000474413 AGBL1Q96MI9 1066 aa21.15■□□□□ 0.98
EFNA1-204ENST00000474413 ISY1Q9ULR0 285 aaKnown RBP21.15■□□□□ 0.98
EFNA1-204ENST00000474413 ALPK3Q96L96 1907 aa21.14■□□□□ 0.98
EFNA1-204ENST00000474413 DNAJC25-GNG10A0A024R161 153 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 E7EWF7 191 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 ZBED4O75132 1171 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 NEFLP07196 543 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 OAZ1P54368 228 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 ANTXR2P58335 489 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 ZNF792Q3KQV3 632 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 OLFML2BQ68BL8 750 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 MMP19Q99542 508 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 KRT23Q9C075 422 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 RANBP17Q9H2T7 1088 aaKnown RBP21.14■□□□□ 0.97
EFNA1-204ENST00000474413 CNNM2Q9H8M5 875 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 SENP2Q9HC62 589 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 GPCPD1Q9NPB8 672 aa21.14■□□□□ 0.97
EFNA1-204ENST00000474413 CYBAP13498 195 aa21.13■□□□□ 0.97
EFNA1-204ENST00000474413 COPB2P35606 906 aa21.13■□□□□ 0.97
EFNA1-204ENST00000474413 LHX8Q68G74 356 aa21.13■□□□□ 0.97
EFNA1-204ENST00000474413 PNMA1Q8ND90 353 aa21.13■□□□□ 0.97
EFNA1-204ENST00000474413 CHURC1Q8WUH1 139 aa21.13■□□□□ 0.97
EFNA1-204ENST00000474413 CPVLQ9H3G5 476 aa21.13■□□□□ 0.97
EFNA1-204ENST00000474413 HMX1Q9NP08 348 aaPredicted RBP21.13■□□□□ 0.97
EFNA1-204ENST00000474413 GOLGA8HP0CJ92 632 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms