RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 EMILIN3Q9NT22 766 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 FAM217BQ9NTX9 383 aaPredicted RBP9.67□□□□□ -0.86
CNN3-205ENST00000474409 RBM27Q9P2N5 1060 aaKnown RBP9.67□□□□□ -0.86
CNN3-205ENST00000474409 SEC63Q9UGP8 760 aaKnown RBP9.67□□□□□ -0.86
CNN3-205ENST00000474409 DOCK5Q9H7D0 1870 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 CASP8AP2Q9UKL3 1982 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 DTNBO60941 627 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 FMNL1O95466 1100 aaPredicted RBP9.66□□□□□ -0.86
CNN3-205ENST00000474409 CTDNEP1O95476 244 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 GJB2P29033 226 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 SLC16A2P36021 539 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 GJA5P36382 358 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 APLP1P51693 650 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 GTF2A2P52657 109 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 GRM1Q13255 1194 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 NTRK3Q16288 839 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 CDC37Q16543 378 aaPredicted RBP9.66□□□□□ -0.86
CNN3-205ENST00000474409 SH3D19Q5HYK7 790 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 SYDE2Q5VT97 1194 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 SPRYD7Q5W111 196 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 TTBK2Q6IQ55 1244 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 FASTKD5Q7L8L6 764 aaKnown RBP9.66□□□□□ -0.86
CNN3-205ENST00000474409 FAM160B2Q86V87 743 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 SRBD1Q8N5C6 995 aaKnown RBP9.66□□□□□ -0.86
CNN3-205ENST00000474409 SMARCC2Q8TAQ2 1214 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 PIBF1Q8WXW3 757 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 WASF1Q92558 559 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 KIFC2Q96AC6 838 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 RRP36Q96EU6 259 aaKnown RBP9.66□□□□□ -0.86
CNN3-205ENST00000474409 SLF1Q9BQI6 1058 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 SPZ1Q9BXG8 430 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 ORC3Q9UBD5 711 aaPredicted RBP9.66□□□□□ -0.86
CNN3-205ENST00000474409 FEM1BQ9UK73 627 aa9.66□□□□□ -0.86
CNN3-205ENST00000474409 CCL15-CCL14A0A0B4J2E2 113 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 DEXIO95424 95 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 SLC10A3P09131 477 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 CETPP11597 493 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 SMARCA1P28370 1054 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 FOSBP53539 338 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 IRX3P78415 501 aaPredicted RBP9.65□□□□□ -0.86
CNN3-205ENST00000474409 PABPC4Q13310 644 aaKnown RBP eCLIP9.65□□□□□ -0.86
CNN3-205ENST00000474409 CCL15Q16663 113 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 TREML2Q5T2D2 321 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 NBPF11Q86T75 865 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 ADGRF4Q8IZF3 695 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 CHURC1Q8WUH1 139 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 UBA5Q9GZZ9 404 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 VAT1LQ9HCJ6 419 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 CREBZFQ9NS37 354 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 AGTPBP1Q9UPW5 1226 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 CTDP1Q9Y5B0 961 aaPredicted RBP9.65□□□□□ -0.86
CNN3-205ENST00000474409 ZNF236Q9UL36 1845 aa9.65□□□□□ -0.86
CNN3-205ENST00000474409 hCG_1642624A0A1W2PR95 340 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 PRPF3O43395 683 aaKnown RBP9.64□□□□□ -0.87
CNN3-205ENST00000474409 CYTH3O43739 400 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 PLA2G6O60733 806 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 XBP1P17861 261 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 TRIM29Q14134 588 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 BTNL9Q6UXG8 535 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 HEATR3Q7Z4Q2 680 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 HHIPL1Q96JK4 782 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 PIGSQ96S52 555 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 ALG1Q9BT22 464 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 RIOX1Q9H6W3 641 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 CWC22Q9HCG8 908 aaKnown RBP9.64□□□□□ -0.87
CNN3-205ENST00000474409 FBXO28Q9NVF7 368 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 PPP1R9AQ9ULJ8 1098 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 PRR12Q9ULL5 1215 aa9.64□□□□□ -0.87
CNN3-205ENST00000474409 MYPNQ86TC9 1320 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 MANSC4A6NHS7 340 aaPredicted RBP9.63□□□□□ -0.87
CNN3-205ENST00000474409 H3BQV1 296 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 hCG_1984214I3L0E3 225 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 ZBTB5O15062 677 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 SCG2P13521 617 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 PDCP20941 246 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 OSBPP22059 807 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 FUT2Q10981 343 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 PFKFB3Q16875 520 aaPredicted RBP9.63□□□□□ -0.87
CNN3-205ENST00000474409 QRICH1Q2TAL8 776 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 IFFO2Q5TF58 517 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 CCDC174Q6PII3 467 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 CATSPERGQ6ZRH7 1159 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 ZNF713Q8N859 430 aaPredicted RBP9.63□□□□□ -0.87
CNN3-205ENST00000474409 PRPF38AQ8NAV1 312 aaKnown RBP9.63□□□□□ -0.87
CNN3-205ENST00000474409 CCDC148Q8NFR7 591 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.87
CNN3-205ENST00000474409 C8orf76Q96K31 380 aa9.63□□□□□ -0.87
CNN3-205ENST00000474409 RANBP17Q9H2T7 1088 aaKnown RBP9.63□□□□□ -0.87
CNN3-205ENST00000474409 JMJD4Q9H9V9 463 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms