RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 PIWIL2Q8TC59 973 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 RNF141Q8WVD5 230 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 DHRS1Q96LJ7 313 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 GMLQ99445 158 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 SGPP1Q9BX95 441 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 GINM1Q9NU53 330 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 RFXAPO00287 272 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 SASH1O94885 1247 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 CBX7O95931 251 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 SSBP05455 408 aaKnown RBP eCLIP5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 NME1P15531 152 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 NASPP49321 788 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 SF3A1Q15459 793 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 BBS9Q3SYG4 887 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 ZNF385BQ569K4 471 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 TNNI3KQ59H18 835 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 ARSHQ5FYA8 562 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 FBXW10Q5XX13 1052 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 IRF2BP1Q8IU81 584 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 SMARCC1Q92922 1105 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 ATG4CQ96DT6 458 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 C19orf44Q9H6X5 657 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 KCNH3Q9ULD8 1083 aa5.24□□□□□ -1.57
ECHDC1-213ENST00000474240 ESR1P03372 595 aa5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 GUCY2CP25092 1073 aa5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 GIPRP48546 466 aa5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 TMEM132EQ6IEE7 984 aa5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 DNAJB8Q8NHS0 232 aa5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 FEZF2Q8TBJ5 459 aa5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 DPH2Q9BQC3 489 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 SLC6A17Q9H1V8 727 aa5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 ADAMTS10Q9H324 1103 aa5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 GCM1Q9NP62 436 aa5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 PPT2Q9UMR5 302 aa5.23□□□□□ -1.57
ECHDC1-213ENST00000474240 CHURC1-FNTBB4DL54 471 aa5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 CLEC3AO75596 197 aa5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 PI3P19957 117 aa5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 KRTAP1-1Q07627 177 aa5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 TIGD5Q53EQ6 642 aa5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 NAALADL2Q58DX5 795 aa5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 LSRQ86X29 649 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 TMEM151BQ8IW70 566 aa5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 XAGE3Q8WTP9 111 aa5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 ARMC5Q96C12 935 aa5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 TRIT1Q9H3H1 467 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-213ENST00000474240 TEX51A0A1B0GUA7 166 aa5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 FGRP09769 529 aa5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 RANGAP1P46060 587 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 ZXDCQ2QGD7 858 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 ERICH6BQ5W0A0 696 aa5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 ZDHHC14Q8IZN3 488 aa5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 PPP1R13LQ8WUF5 828 aa5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 SHDQ96IW2 340 aa5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 KREMEN1Q96MU8 473 aa5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 KIF2CQ99661 725 aa5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 PHAXQ9H814 394 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 SP110Q9HB58 689 aa5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 PRR13Q9NZ81 148 aa5.21□□□□□ -1.58
ECHDC1-213ENST00000474240 WASH4PA8MWX3 477 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 UPK3BL1B0FP48 263 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 UPK3BL2E5RIL1 263 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 PEX10O60683 326 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 DNAJA2O60884 412 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 DNAJA1P31689 397 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 CASP7P55210 303 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 TNK2Q07912 1038 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 CDH24Q86UP0 819 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 CREG2Q8IUH2 290 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 PANK1Q8TE04 598 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 INTS4Q96HW7 963 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 ASCC2Q9H1I8 757 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 ADAM7Q9H2U9 754 aa5.2□□□□□ -1.58
ECHDC1-213ENST00000474240 UBOX5O94941 541 aa5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 NAT2P11245 290 aa5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 PDE6BP35913 854 aa5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 PMS1P54277 932 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 RBM10P98175 930 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 PUM1Q14671 1186 aaKnown RBP eCLIP5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 CCDC81Q6ZN84 652 aa5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 TMPRSS7Q7RTY8 843 aa5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 RIN3Q8TB24 985 aa5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 ENOX1Q8TC92 643 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 GPATCH2Q9NW75 528 aa5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 SUCOQ9UBS9 1254 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 R3HCC1Q9Y3T6 440 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-213ENST00000474240 INSRRP14616 1297 aa5.18□□□□□ -1.58
ECHDC1-213ENST00000474240 NBPF6Q5VWK0 638 aa5.18□□□□□ -1.58
ECHDC1-213ENST00000474240 MCF2L2Q86YR7 1114 aa5.18□□□□□ -1.58
ECHDC1-213ENST00000474240 SYT8Q8NBV8 401 aa5.18□□□□□ -1.58
ECHDC1-213ENST00000474240 PDZD8Q8NEN9 1154 aa5.18□□□□□ -1.58
ECHDC1-213ENST00000474240 NBPF4Q96M43 638 aa5.18□□□□□ -1.58
ECHDC1-213ENST00000474240 SLC6A18Q96N87 628 aa5.18□□□□□ -1.58
ECHDC1-213ENST00000474240 SLC9A7Q96T83 725 aa5.18□□□□□ -1.58
ECHDC1-213ENST00000474240 GPR62Q9BZJ7 368 aa5.18□□□□□ -1.58
ECHDC1-213ENST00000474240 PRKAG3Q9UGI9 489 aa5.18□□□□□ -1.58
ECHDC1-213ENST00000474240 SUV39H1O43463 412 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 STK10O94804 968 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 ZGLP1P0C6A0 271 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 ATP2B1P20020 1258 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms