RNA–Protein interactions for RNA: ENST00000474128.1

LAMA5-208, Transcript of laminin subunit alpha 5, humanhuman

TSL 3

Gene LAMA5, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-208ENST00000474128 TRIM43Q96BQ3 446 aaPredicted RBP20.65■□□□□ 0.9
LAMA5-208ENST00000474128 EPB41L4AQ9HCS5 686 aaPredicted RBP20.65■□□□□ 0.9
LAMA5-208ENST00000474128 CLIP2Q9UDT6 1046 aa20.65■□□□□ 0.9
LAMA5-208ENST00000474128 TACC3Q9Y6A5 838 aa20.65■□□□□ 0.9
LAMA5-208ENST00000474128 CUL9Q8IWT3 2517 aa20.65■□□□□ 0.9
LAMA5-208ENST00000474128 LAMA2P24043 3122 aaKnown RBP20.64■□□□□ 0.9
LAMA5-208ENST00000474128 SYNGAP1Q96PV0 1343 aa20.64■□□□□ 0.89
LAMA5-208ENST00000474128 IGKV6D-41A0A0C4DH26 115 aa20.64■□□□□ 0.89
LAMA5-208ENST00000474128 ATP2A1O14983 1001 aa20.64■□□□□ 0.89
LAMA5-208ENST00000474128 TLE2Q04725 743 aa20.64■□□□□ 0.89
LAMA5-208ENST00000474128 LRRFIP1Q32MZ4 808 aaKnown RBP20.64■□□□□ 0.89
LAMA5-208ENST00000474128 TSHZ3Q63HK5 1081 aa20.64■□□□□ 0.89
LAMA5-208ENST00000474128 ZNF444Q8N0Y2 327 aaPredicted RBP20.64■□□□□ 0.89
LAMA5-208ENST00000474128 DDX11Q96FC9 970 aa20.64■□□□□ 0.89
LAMA5-208ENST00000474128 GUCD1Q96NT3 240 aa20.64■□□□□ 0.89
LAMA5-208ENST00000474128 SYNPO2Q9UMS6 1093 aa20.64■□□□□ 0.89
LAMA5-208ENST00000474128 A0A1W2PQ45 241 aaPredicted RBP20.63■□□□□ 0.89
LAMA5-208ENST00000474128 A0A1W2PQY0 241 aa20.63■□□□□ 0.89
LAMA5-208ENST00000474128 ZBED4O75132 1171 aa20.63■□□□□ 0.89
LAMA5-208ENST00000474128 APPP05067 770 aa20.63■□□□□ 0.89
LAMA5-208ENST00000474128 CLTBP09497 229 aa20.63■□□□□ 0.89
LAMA5-208ENST00000474128 C9orf50Q5SZB4 431 aa20.63■□□□□ 0.89
LAMA5-208ENST00000474128 MAMDC4Q6UXC1 1216 aa20.63■□□□□ 0.89
LAMA5-208ENST00000474128 MKL1Q969V6 931 aa20.63■□□□□ 0.89
LAMA5-208ENST00000474128 TSEN34Q9BSV6 310 aaKnown RBP20.63■□□□□ 0.89
LAMA5-208ENST00000474128 FAM184BQ9ULE4 1060 aa20.63■□□□□ 0.89
LAMA5-208ENST00000474128 RIPK3Q9Y572 518 aa20.63■□□□□ 0.89
LAMA5-208ENST00000474128 CTDP1Q9Y5B0 961 aaPredicted RBP20.63■□□□□ 0.89
LAMA5-208ENST00000474128 DNAJC25-GNG10A0A024R161 153 aa20.62■□□□□ 0.89
LAMA5-208ENST00000474128 PATL2C9JE40 543 aaKnown RBP20.62■□□□□ 0.89
LAMA5-208ENST00000474128 ADAMTS4O75173 837 aa20.62■□□□□ 0.89
LAMA5-208ENST00000474128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.62■□□□□ 0.89
LAMA5-208ENST00000474128 CPXCR1Q8N123 301 aa20.62■□□□□ 0.89
LAMA5-208ENST00000474128 LENG1Q96BZ8 264 aaPredicted RBP20.62■□□□□ 0.89
LAMA5-208ENST00000474128 CEP95Q96GE4 821 aa20.62■□□□□ 0.89
LAMA5-208ENST00000474128 FAM161BQ96MY7 647 aa20.62■□□□□ 0.89
LAMA5-208ENST00000474128 MTMR4Q9NYA4 1195 aa20.62■□□□□ 0.89
LAMA5-208ENST00000474128 FEM1BQ9UK73 627 aa20.62■□□□□ 0.89
LAMA5-208ENST00000474128 M0R2C6 588 aa20.61■□□□□ 0.89
LAMA5-208ENST00000474128 PRDM1O75626 825 aa20.61■□□□□ 0.89
LAMA5-208ENST00000474128 SNAI1O95863 264 aaPredicted RBP20.61■□□□□ 0.89
LAMA5-208ENST00000474128 TTLL1O95922 423 aa20.61■□□□□ 0.89
LAMA5-208ENST00000474128 ZNF467Q7Z7K2 595 aaPredicted RBP20.61■□□□□ 0.89
LAMA5-208ENST00000474128 IFNL3Q8IZI9 196 aa20.61■□□□□ 0.89
LAMA5-208ENST00000474128 GMCL1P1Q8NEA9 526 aa20.61■□□□□ 0.89
LAMA5-208ENST00000474128 KIFC2Q96AC6 838 aa20.61■□□□□ 0.89
LAMA5-208ENST00000474128 NACAP1Q9BZK3 213 aa20.61■□□□□ 0.89
LAMA5-208ENST00000474128 SLC38A10Q9HBR0 1119 aa20.61■□□□□ 0.89
LAMA5-208ENST00000474128 FBXO40Q9UH90 709 aa20.61■□□□□ 0.89
LAMA5-208ENST00000474128 TTC41PQ6P2S7 1318 aa20.6■□□□□ 0.89
LAMA5-208ENST00000474128 KIAA0355O15063 1070 aa20.6■□□□□ 0.89
LAMA5-208ENST00000474128 PQBP1O60828 265 aaKnown RBP20.6■□□□□ 0.89
LAMA5-208ENST00000474128 SLC4A3P48751 1232 aa20.6■□□□□ 0.89
LAMA5-208ENST00000474128 OAZ1P54368 228 aa20.6■□□□□ 0.89
LAMA5-208ENST00000474128 SMAD3P84022 425 aaKnown RBP20.6■□□□□ 0.89
LAMA5-208ENST00000474128 NUP133Q8WUM0 1156 aa20.6■□□□□ 0.89
LAMA5-208ENST00000474128 RAVER2Q9HCJ3 691 aaKnown RBP20.6■□□□□ 0.89
LAMA5-208ENST00000474128 STARD7Q9NQZ5 370 aa20.6■□□□□ 0.89
LAMA5-208ENST00000474128 ZHX1Q9UKY1 873 aaPredicted RBP20.6■□□□□ 0.89
LAMA5-208ENST00000474128 PLIN4Q96Q06 1357 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 SYNRGQ9UMZ2 1314 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 MOXD2PA6NHM9 499 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 RAG1P15918 1043 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 ITGB8P26012 769 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 ACLYP53396 1101 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 PDE4BQ07343 736 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 ANKRD33Q7Z3H0 272 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 ANKRD35Q8N283 1001 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 KLHDC9Q8NEP7 349 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 CHST13Q8NET6 341 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 TOX2Q96NM4 488 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 MYH4Q9Y623 1939 aa20.59■□□□□ 0.89
LAMA5-208ENST00000474128 ERC2O15083 957 aa20.58■□□□□ 0.89
LAMA5-208ENST00000474128 DUSP11O75319 330 aaKnown RBP20.58■□□□□ 0.89
LAMA5-208ENST00000474128 SLC3A2P08195 630 aaKnown RBP20.58■□□□□ 0.89
LAMA5-208ENST00000474128 TSPY3P0CV98 308 aa20.58■□□□□ 0.89
LAMA5-208ENST00000474128 TSPY8P0CW00 308 aa20.58■□□□□ 0.89
LAMA5-208ENST00000474128 FDX1P10109 184 aa20.58■□□□□ 0.89
LAMA5-208ENST00000474128 LRRC47Q8N1G4 583 aaKnown RBP20.58■□□□□ 0.89
LAMA5-208ENST00000474128 NEDD1Q8NHV4 660 aa20.58■□□□□ 0.89
LAMA5-208ENST00000474128 SEMA6BQ9H3T3 888 aa20.58■□□□□ 0.89
LAMA5-208ENST00000474128 TMEM39AQ9NV64 488 aa20.58■□□□□ 0.89
LAMA5-208ENST00000474128 DCDC2CA8MYV0 355 aa20.57■□□□□ 0.88
LAMA5-208ENST00000474128 BMP3P12645 472 aa20.57■□□□□ 0.88
LAMA5-208ENST00000474128 CST5P28325 142 aaPredicted RBP20.57■□□□□ 0.88
LAMA5-208ENST00000474128 ACVR2BQ13705 512 aa20.57■□□□□ 0.88
LAMA5-208ENST00000474128 KCNA10Q16322 511 aa20.57■□□□□ 0.88
LAMA5-208ENST00000474128 SLFN13Q68D06 897 aa20.57■□□□□ 0.88
LAMA5-208ENST00000474128 CCSAPQ6IQ19 270 aaPredicted RBP20.57■□□□□ 0.88
LAMA5-208ENST00000474128 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.57■□□□□ 0.88
LAMA5-208ENST00000474128 NAPBQ9H115 298 aa20.57■□□□□ 0.88
LAMA5-208ENST00000474128 ABHD16BQ9H3Z7 469 aa20.57■□□□□ 0.88
LAMA5-208ENST00000474128 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.57■□□□□ 0.88
LAMA5-208ENST00000474128 FPGSQ05932 587 aa20.56■□□□□ 0.88
LAMA5-208ENST00000474128 FAAP100Q0VG06 881 aa20.56■□□□□ 0.88
LAMA5-208ENST00000474128 PI4K2BQ8TCG2 481 aa20.56■□□□□ 0.88
LAMA5-208ENST00000474128 RNPC3Q96LT9 517 aaKnown RBP20.56■□□□□ 0.88
LAMA5-208ENST00000474128 FGD4Q96M96 766 aa20.56■□□□□ 0.88
LAMA5-208ENST00000474128 SEC62Q99442 399 aaKnown RBP20.56■□□□□ 0.88
LAMA5-208ENST00000474128 CDX2Q99626 313 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms