RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 FLOT1O75955 427 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 PGK1P00558 417 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 RARBP10826 455 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 FCER1AP12319 257 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 RAG1P15918 1043 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 FOXK1P85037 733 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 MAP3K12Q12852 859 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 PLS1Q14651 629 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 TMEM132BQ14DG7 1078 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 TMED8Q6PL24 325 aaPredicted RBP6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 TMEM179Q6ZVK1 233 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 ANKRD33Q7Z3H0 272 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 NCAPG2Q86XI2 1143 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 CLEC10AQ8IUN9 316 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 SIAH1Q8IUQ4 282 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 TMEM57Q8N5G2 664 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 SLC44A5Q8NCS7 719 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 CLUAP1Q96AJ1 413 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 LENG1Q96BZ8 264 aaPredicted RBP6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 EAF2Q96CJ1 260 aaPredicted RBP6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 ATG4CQ96DT6 458 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 CCDC8Q9H0W5 538 aaPredicted RBP6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 GPHNQ9NQX3 736 aaPredicted RBP6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 RYDENQ9NUL5 291 aaKnown RBP6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 NOP58Q9Y2X3 529 aaKnown RBP6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 SMCHD1A6NHR9 2005 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 PIEZO1Q92508 2521 aa6.23□□□□□ -1.41
SNRNP40-204ENST00000474025 MAGEB6P1A0A0J9YX57 407 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 WDR46O15213 610 aaKnown RBP6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 ADAMTS4O75173 837 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 BCAR3O75815 825 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 SLC25A27O95847 323 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 POLR3DP05423 398 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 PGK2P07205 417 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 NUDT7P0C024 238 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 ZNF865P0CJ78 1059 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 PDE6AP16499 860 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 TAL1P17542 331 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 ATP8B2P98198 1209 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 FPGSQ05932 587 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 FAAP100Q0VG06 881 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 ZNF792Q3KQV3 632 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 RNF180Q86T96 592 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 SPICE1Q8N0Z3 855 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 SDR42E1Q8WUS8 393 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 PTCD2Q8WV60 388 aaKnown RBP6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 FRAT1Q92837 279 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 TIFAQ96CG3 184 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 TOX2Q96NM4 488 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 TINF2Q9BSI4 451 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 CRNKL1Q9BZJ0 848 aaKnown RBP6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 ZNF576Q9H609 170 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 C1orf115Q9H7X2 142 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 VCPKMTQ9H867 229 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 DCP1AQ9NPI6 582 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 TMEM39AQ9NV64 488 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 FBXO28Q9NVF7 368 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 TBX21Q9UL17 535 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 TMX2Q9Y320 296 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 MYO9BQ13459 2157 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 PARP14Q460N5 1801 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 SYNRGQ9UMZ2 1314 aa6.22□□□□□ -1.41
SNRNP40-204ENST00000474025 TCRBV5S4A2TA0A5A2 114 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 TIMP1P01033 207 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 CYP2D6P10635 497 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 AKR1A1P14550 325 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 AKR1B1P15121 316 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 PBX2P40425 430 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 ICA1Q05084 483 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 RASIP1Q5U651 963 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 RIOX2Q8IUF8 465 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 KLHDC9Q8NEP7 349 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 REPS2Q8NFH8 660 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 DYNLL2Q96FJ2 89 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 MMP19Q99542 508 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.21□□□□□ -1.421e-8■■□□□ 11.5
SNRNP40-204ENST00000474025 TSEN34Q9BSV6 310 aaKnown RBP6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 SH2D4AQ9H788 454 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 ARHGEF10LQ9HCE6 1279 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 STARD7Q9NQZ5 370 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 MCM9Q9NXL9 1143 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 RAPGEFL1Q9UHV5 662 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 ZNF214Q9UL59 606 aaPredicted RBP6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 ADAMTS5Q9UNA0 930 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 LHX6Q9UPM6 363 aa6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 DIS3Q9Y2L1 958 aaKnown RBP6.21□□□□□ -1.42
SNRNP40-204ENST00000474025 C5orf42Q9H799 3197 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 COL11A1P12107 1806 aaPredicted RBP6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 PLXNA1Q9UIW2 1896 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 MYADML2A6NDP7 307 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 MOXD2PA6NHM9 499 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 GRXCR1A8MXD5 290 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 DCDC2CA8MYV0 355 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 SMIM22K7EJ46 135 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 VWA5AO00534 786 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 ACLYP53396 1101 aa6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 MRPS5P82675 430 aaKnown RBP6.2□□□□□ -1.42
SNRNP40-204ENST00000474025 PPIGQ13427 754 aaKnown RBP eCLIP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms