RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 FAM237AA0A1B0GTK4 181 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 CTAGE5O15320 804 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 TMEM179Q6ZVK1 233 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 LUZP1Q86V48 1076 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 ADGRF4Q8IZF3 695 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 CCDC148Q8NFR7 591 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 FAM151AQ8WW52 585 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 COA7Q96BR5 231 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 CSRNP2Q9H175 543 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 KANSL2Q9H9L4 492 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 JMJD4Q9H9V9 463 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.61■□□□□ 0.89
VARS2-206ENST00000473916 MYOZ2Q9NPC6 264 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.61■□□□□ 0.89
VARS2-206ENST00000473916 USP25Q9UHP3 1055 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 SRPRBQ9Y5M8 271 aaKnown RBP20.61■□□□□ 0.89
VARS2-206ENST00000473916 PPP1R11O60927 126 aaPredicted RBP20.6■□□□□ 0.89
VARS2-206ENST00000473916 SMARCA1P28370 1054 aa20.6■□□□□ 0.89
VARS2-206ENST00000473916 RBM26Q5T8P6 1007 aaKnown RBP20.6■□□□□ 0.89
VARS2-206ENST00000473916 C11orf57Q6ZUT1 292 aaPredicted RBP20.6■□□□□ 0.89
VARS2-206ENST00000473916 MTMR14Q8NCE2 650 aa20.6■□□□□ 0.89
VARS2-206ENST00000473916 ANP32BQ92688 251 aaKnown RBP20.6■□□□□ 0.89
VARS2-206ENST00000473916 NYAP2Q9P242 653 aa20.6■□□□□ 0.89
VARS2-206ENST00000473916 CEP131Q9UPN4 1083 aa20.6■□□□□ 0.89
VARS2-206ENST00000473916 MCM7P33993 719 aa20.6■□□□□ 0.89
VARS2-206ENST00000473916 MIGA2Q7L4E1 593 aa20.6■□□□□ 0.89
VARS2-206ENST00000473916 DAGLBQ8NCG7 672 aa20.6■□□□□ 0.89
VARS2-206ENST00000473916 ZMYND12Q9H0C1 365 aa20.6■□□□□ 0.89
VARS2-206ENST00000473916 CBX8Q9HC52 389 aa20.6■□□□□ 0.89
VARS2-206ENST00000473916 KCNH3Q9ULD8 1083 aa20.6■□□□□ 0.89
VARS2-206ENST00000473916 USP17L10C9JJH3 530 aa20.59■□□□□ 0.89
VARS2-206ENST00000473916 AP5Z1O43299 807 aa20.59■□□□□ 0.89
VARS2-206ENST00000473916 PTGDRQ13258 359 aa20.59■□□□□ 0.89
VARS2-206ENST00000473916 FAM200AQ8TCP9 573 aa20.59■□□□□ 0.89
VARS2-206ENST00000473916 MKL1Q969V6 931 aa20.59■□□□□ 0.89
VARS2-206ENST00000473916 NUP88Q99567 741 aaPredicted RBP20.59■□□□□ 0.89
VARS2-206ENST00000473916 ASTN2O75129 1339 aaPredicted RBP20.59■□□□□ 0.89
VARS2-206ENST00000473916 SMCO2A6NFE2 343 aa20.58■□□□□ 0.89
VARS2-206ENST00000473916 INF2Q27J81 1249 aa20.58■□□□□ 0.89
VARS2-206ENST00000473916 LONRF3Q496Y0 759 aa20.58■□□□□ 0.89
VARS2-206ENST00000473916 PDLIM2Q96JY6 352 aa20.58■□□□□ 0.89
VARS2-206ENST00000473916 A0A1W2PRG0 241 aa20.58■□□□□ 0.88
VARS2-206ENST00000473916 FOXN1O15353 648 aa20.58■□□□□ 0.88
VARS2-206ENST00000473916 SLFN13Q68D06 897 aa20.58■□□□□ 0.88
VARS2-206ENST00000473916 EPSTI1Q96J88 318 aa20.58■□□□□ 0.88
VARS2-206ENST00000473916 CCDC194A0A1B0GVG4 234 aa20.57■□□□□ 0.88
VARS2-206ENST00000473916 GMPSP49915 693 aaPredicted RBP20.57■□□□□ 0.88
VARS2-206ENST00000473916 ATP2C1P98194 919 aaPredicted RBP20.57■□□□□ 0.88
VARS2-206ENST00000473916 IL17AQ16552 155 aa20.57■□□□□ 0.88
VARS2-206ENST00000473916 TMEM260Q9NX78 707 aa20.57■□□□□ 0.88
VARS2-206ENST00000473916 PGAP2Q9UHJ9 254 aa20.57■□□□□ 0.88
VARS2-206ENST00000473916 HERC5Q9UII4 1024 aaKnown RBP20.57■□□□□ 0.88
VARS2-206ENST00000473916 GJA3Q9Y6H8 435 aa20.57■□□□□ 0.88
VARS2-206ENST00000473916 A0A087X0B3 334 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 BIN1O00499 593 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 SLC1A4P43007 532 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 TNIP1Q15025 636 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 UVSSAQ2YD98 709 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 SAMD7Q7Z3H4 446 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 PDILTQ8N807 584 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 KIAA1468Q9P260 1216 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 ZNF541Q9H0D2 1346 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 VWA3AA6NCI4 1184 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 ECE1P42892 770 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 TRAPPC10P48553 1259 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 PNOCQ13519 176 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 STX1AQ16623 288 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 GPATCH4Q5T3I0 446 aaKnown RBP20.56■□□□□ 0.88
VARS2-206ENST00000473916 ZNF579Q8NAF0 562 aaKnown RBP20.56■□□□□ 0.88
VARS2-206ENST00000473916 LTBP3Q9NS15 1303 aa20.56■□□□□ 0.88
VARS2-206ENST00000473916 F5H6K3 240 aa20.55■□□□□ 0.88
VARS2-206ENST00000473916 POLR2DO15514 142 aaKnown RBP20.55■□□□□ 0.88
VARS2-206ENST00000473916 MYO1BO43795 1136 aa20.55■□□□□ 0.88
VARS2-206ENST00000473916 NDUFB10O96000 172 aa20.55■□□□□ 0.88
VARS2-206ENST00000473916 ZNF165P49910 485 aa20.55■□□□□ 0.88
VARS2-206ENST00000473916 ZNF280AP59817 542 aaPredicted RBP20.55■□□□□ 0.88
VARS2-206ENST00000473916 KLRC3Q07444 240 aa20.55■□□□□ 0.88
VARS2-206ENST00000473916 GALNT17Q6IS24 598 aa20.55■□□□□ 0.88
VARS2-206ENST00000473916 MICALL2Q8IY33 904 aa20.55■□□□□ 0.88
VARS2-206ENST00000473916 TIGD1Q96MW7 591 aa20.55■□□□□ 0.88
VARS2-206ENST00000473916 BIN2Q9UBW5 565 aaPredicted RBP20.55■□□□□ 0.88
VARS2-206ENST00000473916 SNAP25P60880 206 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 PLCB2Q00722 1185 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 KIAA1755Q5JYT7 1200 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 PPP4R3BQ5MIZ7 849 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 FKBP1CQ5VVH2 108 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 JAKMIP3Q5VZ66 844 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 KRBA2Q6ZNG9 492 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 SPICE1Q8N0Z3 855 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 C4orf32Q8N8J7 132 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 ACER1Q8TDN7 264 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 CCDC12Q8WUD4 166 aaPredicted RBP20.54■□□□□ 0.88
VARS2-206ENST00000473916 C6orf50Q9HD87 102 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 FAM13BQ9NYF5 915 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 MORC2Q9Y6X9 1032 aaPredicted RBP20.54■□□□□ 0.88
VARS2-206ENST00000473916 ATAD5Q96QE3 1844 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 SMCHD1A6NHR9 2005 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 PNMA6FA0A0J9YX94 578 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 FZD9O00144 591 aa20.54■□□□□ 0.88
VARS2-206ENST00000473916 TBC1D10BQ4KMP7 808 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms