RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 KCTD2Q14681 263 aa18.48■□□□□ 0.55
CLIC3-201ENST00000473911 LRIT3Q3SXY7 679 aa18.48■□□□□ 0.55
CLIC3-201ENST00000473911 PPP4R3BQ5MIZ7 849 aa18.48■□□□□ 0.55
CLIC3-201ENST00000473911 TICAM2Q86XR7 235 aa18.48■□□□□ 0.55
CLIC3-201ENST00000473911 MKL1Q969V6 931 aa18.48■□□□□ 0.55
CLIC3-201ENST00000473911 KIFC2Q96AC6 838 aa18.48■□□□□ 0.55
CLIC3-201ENST00000473911 UBE2OQ9C0C9 1292 aaKnown RBP18.48■□□□□ 0.55
CLIC3-201ENST00000473911 SYNPO2Q9UMS6 1093 aa18.48■□□□□ 0.55
CLIC3-201ENST00000473911 A0A0G2JMZ2 1700 aa18.48■□□□□ 0.55
CLIC3-201ENST00000473911 MSCO60682 206 aa18.47■□□□□ 0.55
CLIC3-201ENST00000473911 ZBED4O75132 1171 aa18.47■□□□□ 0.55
CLIC3-201ENST00000473911 NMIQ13287 307 aaPredicted RBP18.47■□□□□ 0.55
CLIC3-201ENST00000473911 SLFN13Q68D06 897 aa18.47■□□□□ 0.55
CLIC3-201ENST00000473911 PRPF38AQ8NAV1 312 aaKnown RBP18.47■□□□□ 0.55
CLIC3-201ENST00000473911 GMCL1P1Q8NEA9 526 aa18.47■□□□□ 0.55
CLIC3-201ENST00000473911 DDX20Q9UHI6 824 aaKnown RBP18.47■□□□□ 0.55
CLIC3-201ENST00000473911 FEM1BQ9UK73 627 aa18.47■□□□□ 0.55
CLIC3-201ENST00000473911 ZNF214Q9UL59 606 aaPredicted RBP18.47■□□□□ 0.55
CLIC3-201ENST00000473911 EYSQ5T1H1 3165 aa18.47■□□□□ 0.55
CLIC3-201ENST00000473911 RANBP6O60518 1105 aaKnown RBP18.46■□□□□ 0.55
CLIC3-201ENST00000473911 SLC4A3P48751 1232 aa18.46■□□□□ 0.55
CLIC3-201ENST00000473911 ALX1Q15699 326 aa18.46■□□□□ 0.55
CLIC3-201ENST00000473911 PLEKHM2Q8IWE5 1019 aa18.46■□□□□ 0.55
CLIC3-201ENST00000473911 REPS2Q8NFH8 660 aa18.46■□□□□ 0.55
CLIC3-201ENST00000473911 TEX13BQ9BXU2 312 aa18.46■□□□□ 0.55
CLIC3-201ENST00000473911 SENP6Q9GZR1 1112 aaPredicted RBP18.46■□□□□ 0.55
CLIC3-201ENST00000473911 INCENPQ9NQS7 918 aa18.46■□□□□ 0.55
CLIC3-201ENST00000473911 TOMM22Q9NS69 142 aa18.46■□□□□ 0.55
CLIC3-201ENST00000473911 MTMR10Q9NXD2 777 aa18.46■□□□□ 0.55
CLIC3-201ENST00000473911 ANAPC4Q9UJX5 808 aa18.46■□□□□ 0.55
CLIC3-201ENST00000473911 STX8Q9UNK0 236 aa18.46■□□□□ 0.55
CLIC3-201ENST00000473911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLIC3-201ENST00000473911 BMP3P12645 472 aa18.45■□□□□ 0.54
CLIC3-201ENST00000473911 CYBAP13498 195 aa18.45■□□□□ 0.54
CLIC3-201ENST00000473911 ATN1P54259 1190 aaPredicted RBP18.45■□□□□ 0.54
CLIC3-201ENST00000473911 IKQ13123 557 aaPredicted RBP18.45■□□□□ 0.54
CLIC3-201ENST00000473911 SNRNP48Q6IEG0 339 aaKnown RBP18.45■□□□□ 0.54
CLIC3-201ENST00000473911 CPXCR1Q8N123 301 aa18.45■□□□□ 0.54
CLIC3-201ENST00000473911 MAML3Q96JK9 1138 aa18.45■□□□□ 0.54
CLIC3-201ENST00000473911 GREB1LQ9C091 1923 aaPredicted RBP18.45■□□□□ 0.54
CLIC3-201ENST00000473911 FGAP02671 866 aa18.44■□□□□ 0.54
CLIC3-201ENST00000473911 PGK2P07205 417 aa18.44■□□□□ 0.54
CLIC3-201ENST00000473911 HSPD1P10809 573 aaKnown RBP18.44■□□□□ 0.54
CLIC3-201ENST00000473911 SDSP20132 328 aa18.44■□□□□ 0.54
CLIC3-201ENST00000473911 MFAP1P55081 439 aaKnown RBP18.44■□□□□ 0.54
CLIC3-201ENST00000473911 ANO1Q5XXA6 986 aa18.44■□□□□ 0.54
CLIC3-201ENST00000473911 GPR153Q6NV75 609 aa18.44■□□□□ 0.54
CLIC3-201ENST00000473911 ZNF589Q86UQ0 364 aaPredicted RBP18.44■□□□□ 0.54
CLIC3-201ENST00000473911 CHMP4CQ96CF2 233 aa18.44■□□□□ 0.54
CLIC3-201ENST00000473911 OSBPL3Q9H4L5 887 aa18.44■□□□□ 0.54
CLIC3-201ENST00000473911 CCDC171Q6TFL3 1326 aa18.44■□□□□ 0.54
CLIC3-201ENST00000473911 TMEM232C9JQI7 657 aa18.43■□□□□ 0.54
CLIC3-201ENST00000473911 SLC1A4P43007 532 aa18.43■□□□□ 0.54
CLIC3-201ENST00000473911 RRP12Q5JTH9 1297 aaKnown RBP18.43■□□□□ 0.54
CLIC3-201ENST00000473911 RAVER2Q9HCJ3 691 aaKnown RBP18.43■□□□□ 0.54
CLIC3-201ENST00000473911 DIAPH3Q9NSV4 1193 aa18.43■□□□□ 0.54
CLIC3-201ENST00000473911 ZNF236Q9UL36 1845 aa18.43■□□□□ 0.54
CLIC3-201ENST00000473911 ORC4O43929 436 aa18.42■□□□□ 0.54
CLIC3-201ENST00000473911 NMT2O60551 498 aa18.42■□□□□ 0.54
CLIC3-201ENST00000473911 MCCP23508 829 aa18.42■□□□□ 0.54
CLIC3-201ENST00000473911 STAT2P52630 851 aa18.42■□□□□ 0.54
CLIC3-201ENST00000473911 PRAMEF19Q5SWL8 479 aa18.42■□□□□ 0.54
CLIC3-201ENST00000473911 GJC2Q5T442 439 aaPredicted RBP18.42■□□□□ 0.54
CLIC3-201ENST00000473911 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
CLIC3-201ENST00000473911 GMCL1Q96IK5 515 aa18.42■□□□□ 0.54
CLIC3-201ENST00000473911 SLC38A10Q9HBR0 1119 aa18.42■□□□□ 0.54
CLIC3-201ENST00000473911 MTMR7Q9Y216 660 aa18.42■□□□□ 0.54
CLIC3-201ENST00000473911 PRUNE2Q8WUY3 3088 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 ATP2A1O14983 1001 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 SEPT4O43236 478 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 MYCNP04198 464 aaPredicted RBP18.41■□□□□ 0.54
CLIC3-201ENST00000473911 HAND2P61296 217 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 ZNF792Q3KQV3 632 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 FAM160B2Q86V87 743 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 CHURC1Q8WUH1 139 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 IL17RBQ9NRM6 502 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 DIS3Q9Y2L1 958 aaKnown RBP18.41■□□□□ 0.54
CLIC3-201ENST00000473911 RIPK3Q9Y572 518 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 TACC3Q9Y6A5 838 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 ZMYM6O95789 1325 aa18.41■□□□□ 0.54
CLIC3-201ENST00000473911 ZNFX1Q9P2E3 1918 aaKnown RBP18.41■□□□□ 0.54
CLIC3-201ENST00000473911 SMCHD1A6NHR9 2005 aa18.4■□□□□ 0.54
CLIC3-201ENST00000473911 LTBP2Q14767 1821 aa18.4■□□□□ 0.54
CLIC3-201ENST00000473911 PARP14Q460N5 1801 aa18.4■□□□□ 0.54
CLIC3-201ENST00000473911 HIP1O00291 1037 aa18.4■□□□□ 0.54
CLIC3-201ENST00000473911 FDX1P10109 184 aa18.4■□□□□ 0.54
CLIC3-201ENST00000473911 IRX6P78412 446 aaPredicted RBP18.4■□□□□ 0.54
CLIC3-201ENST00000473911 CWC27Q6UX04 472 aaKnown RBP18.4■□□□□ 0.54
CLIC3-201ENST00000473911 ARRDC4Q8NCT1 418 aa18.4■□□□□ 0.54
CLIC3-201ENST00000473911 STAG1Q8WVM7 1258 aa18.4■□□□□ 0.54
CLIC3-201ENST00000473911 TINF2Q9BSI4 451 aa18.4■□□□□ 0.54
CLIC3-201ENST00000473911 STXBP5LQ9Y2K9 1186 aa18.4■□□□□ 0.54
CLIC3-201ENST00000473911 DNM1LO00429 736 aa18.39■□□□□ 0.53
CLIC3-201ENST00000473911 FGRP09769 529 aa18.39■□□□□ 0.53
CLIC3-201ENST00000473911 OAZ1P54368 228 aa18.39■□□□□ 0.53
CLIC3-201ENST00000473911 RTP1P59025 263 aa18.39■□□□□ 0.53
CLIC3-201ENST00000473911 CCDC96Q2M329 555 aa18.39■□□□□ 0.53
CLIC3-201ENST00000473911 KCTD1Q719H9 257 aa18.39■□□□□ 0.53
CLIC3-201ENST00000473911 ANKRD35Q8N283 1001 aa18.39■□□□□ 0.53
CLIC3-201ENST00000473911 HOMER2Q9NSB8 354 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms