RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PCP11498 1178 aaKnown RBP12.36□□□□□ -0.43
C9orf3-214ENST00000473778 COPB1P53618 953 aaKnown RBP12.36□□□□□ -0.43
C9orf3-214ENST00000473778 IRX3P78415 501 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-214ENST00000473778 PAK1Q13153 545 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 CLEC4GQ6UXB4 293 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 AMIGO3Q86WK7 504 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 SLC35F6Q8N357 371 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 PNKPQ96T60 521 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 CHP1Q99653 195 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 NAA15Q9BXJ9 866 aaKnown RBP12.36□□□□□ -0.43
C9orf3-214ENST00000473778 TRIM10Q9UDY6 481 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 RWDD2AQ9UIY3 292 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 TFR2Q9UP52 801 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 REXO2Q9Y3B8 237 aaKnown RBP12.36□□□□□ -0.43
C9orf3-214ENST00000473778 TSPY2A6NKD2 308 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 KCNJ18B7U540 433 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 NKRFO15226 690 aaKnown RBP eCLIP12.36□□□□□ -0.43
C9orf3-214ENST00000473778 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-214ENST00000473778 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
C9orf3-214ENST00000473778 CYP2C19P33261 490 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 ST5P78524 1137 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 KCNJ12Q14500 433 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 GRIK5Q16478 980 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 EEF2KMTQ96G04 330 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
C9orf3-214ENST00000473778 ZNF652Q9Y2D9 606 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 MYH1P12882 1939 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 TXLNAP40222 546 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 TRAPPC10P48553 1259 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 GYS2P54840 703 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 CHMP4BP1P59074 171 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 ZNF658Q5TYW1 1059 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-214ENST00000473778 SRGAP1Q7Z6B7 1085 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 PLIN2Q99541 437 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 SUGCTQ9HAC7 445 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
C9orf3-214ENST00000473778 SBF2Q86WG5 1849 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 USP17L3A6NCW0 530 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 USP17L4A6NCW7 530 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
C9orf3-214ENST00000473778 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
C9orf3-214ENST00000473778 FILIP1LQ4L180 1135 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 USP17L1Q7RTZ2 530 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 BLIDQ8IZY5 108 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 CRNKL1Q9BZJ0 848 aaKnown RBP12.35□□□□□ -0.43
C9orf3-214ENST00000473778 CPVLQ9H3G5 476 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 MCM9Q9NXL9 1143 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 CDC23Q9UJX2 597 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 IRS2Q9Y4H2 1338 aa12.35□□□□□ -0.43
C9orf3-214ENST00000473778 MAST2Q6P0Q8 1798 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 H3BQF6 201 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 KLRC4O43908 158 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 TPM1P09493 284 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 OAS2P29728 719 aaKnown RBP12.34□□□□□ -0.43
C9orf3-214ENST00000473778 TFAP4Q01664 338 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 LONRF2Q1L5Z9 754 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 SBK1Q52WX2 424 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 NUP88Q99567 741 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-214ENST00000473778 SLF1Q9BQI6 1058 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 DISC1Q9NRI5 854 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 ATP8A2Q9NTI2 1148 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-214ENST00000473778 MAD2L2Q9UI95 211 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 MTMR7Q9Y216 660 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 TTC26A0AVF1 554 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 KIF5CO60282 957 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 SMC1AQ14683 1233 aaKnown RBP12.34□□□□□ -0.43
C9orf3-214ENST00000473778 WWC2Q6AWC2 1192 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 PNMA1Q8ND90 353 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 ARFGAP3Q9NP61 516 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 ARPP21Q9UBL0 812 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-214ENST00000473778 PCDHA4Q9UN74 947 aa12.34□□□□□ -0.43
C9orf3-214ENST00000473778 EP400Q96L91 3159 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 KRT9P35527 623 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 STAT6P42226 847 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 UBXN1Q04323 297 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 INF2Q27J81 1249 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
C9orf3-214ENST00000473778 ADSSL1Q8N142 457 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-214ENST00000473778 PCDHA6Q9UN73 950 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 PCDHA8Q9Y5H6 950 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 MAP2K7O14733 419 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 PARP1P09874 1014 aaKnown RBP12.33□□□□□ -0.44
C9orf3-214ENST00000473778 TM4SF1P30408 202 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 LONP1P36776 959 aaKnown RBP12.33□□□□□ -0.44
C9orf3-214ENST00000473778 AMPD2Q01433 879 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 DIXDC1Q155Q3 683 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 C12orf60Q5U649 245 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 WDR59Q6PJI9 974 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 TMTC1Q8IUR5 882 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 TEX2Q8IWB9 1127 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 NOA1Q8NC60 698 aaKnown RBP12.33□□□□□ -0.44
C9orf3-214ENST00000473778 NEK11Q8NG66 645 aa12.33□□□□□ -0.44
C9orf3-214ENST00000473778 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
C9orf3-214ENST00000473778 CCDC151A5D8V7 595 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms