RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ZC3H6P61129 1189 aaKnown RBP3.44□□□□□ -1.86
CALD1-216ENST00000473714 TAGLNQ01995 201 aaKnown RBP3.44□□□□□ -1.86
CALD1-216ENST00000473714 TMC7Q7Z402 723 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 SMC1BQ8NDV3 1235 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 DMRTB1Q96MA1 342 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 WDR18Q9BV38 432 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 PCOLCE2Q9UKZ9 415 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 EHBP1L1Q8N3D4 1523 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 C10orf71Q711Q0 1435 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 PRAG1Q86YV5 1406 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 SPATA31A5Q5VU36 1347 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 NPHP3Q7Z494 1330 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 SPATA31A7Q8IWB4 1347 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 PLEKHH2Q8IVE3 1493 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 FYCO1Q9BQS8 1478 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 PRXQ9BXM0 1461 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 SBF2Q86WG5 1849 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 A0A096LPE4 126 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 A0A1W2PPZ6 126 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 SCAMP3O14828 347 aaKnown RBP3.43□□□□□ -1.86
CALD1-216ENST00000473714 SORBS3O60504 671 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 PHACTR2O75167 634 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 NEFLP07196 543 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 P4HBP07237 508 aaKnown RBP3.43□□□□□ -1.86
CALD1-216ENST00000473714 ADRB1P08588 477 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 CELA3BP08861 270 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 HSPA8P11142 646 aaKnown RBP3.43□□□□□ -1.86
CALD1-216ENST00000473714 POLD1P28340 1107 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 USP5P45974 858 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 IDI1Q13907 227 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 SF3A1Q15459 793 aaKnown RBP3.43□□□□□ -1.86
CALD1-216ENST00000473714 ZXDCQ2QGD7 858 aaPredicted RBP3.43□□□□□ -1.86
CALD1-216ENST00000473714 C9orf131Q5VYM1 1079 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 FBXO33Q7Z6M2 555 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 CXorf38Q8TB03 319 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 SREK1Q8WXA9 508 aaKnown RBP3.43□□□□□ -1.86
CALD1-216ENST00000473714 CCDC120Q96HB5 630 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 SNX27Q96L92 541 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 TRIM56Q9BRZ2 755 aaKnown RBP3.43□□□□□ -1.86
CALD1-216ENST00000473714 RBCK1Q9BYM8 510 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 BACH2Q9BYV9 841 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 NIF3L1Q9GZT8 377 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 CCDC87Q9NVE4 849 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 GTF2IRD1Q9UHL9 959 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 ARHGAP31Q2M1Z3 1444 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 ADAMTS13Q76LX8 1427 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 PTPRUQ92729 1446 aa3.43□□□□□ -1.86
CALD1-216ENST00000473714 ADGRL2O95490 1459 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 PXDNQ92626 1479 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 COL24A1Q17RW2 1714 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 ABCA3Q99758 1704 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 TMPRSS2O15393 492 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 PRPF40AO75400 957 aaKnown RBP3.42□□□□□ -1.86
CALD1-216ENST00000473714 TNFRSF21O75509 655 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 POLR3DP05423 398 aaPredicted RBP3.42□□□□□ -1.86
CALD1-216ENST00000473714 RAC2P15153 192 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 VAMP1P23763 118 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 KRTAP10-2P60368 255 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 NFKB2Q00653 900 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 EHHADHQ08426 723 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 GNL2Q13823 731 aaKnown RBP3.42□□□□□ -1.86
CALD1-216ENST00000473714 SKOR2Q2VWA4 1001 aaPredicted RBP3.42□□□□□ -1.86
CALD1-216ENST00000473714 NAALADL2Q58DX5 795 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 TOP6BLQ8N6T0 577 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 HEXIM2Q96MH2 286 aaKnown RBP3.42□□□□□ -1.86
CALD1-216ENST00000473714 FAM161BQ96MY7 647 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 KCNC2Q96PR1 638 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 FANCD2OSQ96PS1 177 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 DUSP9Q99956 384 aaKnown RBP3.42□□□□□ -1.86
CALD1-216ENST00000473714 CCSER2Q9H7U1 834 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 CARS2Q9HA77 564 aaKnown RBP3.42□□□□□ -1.86
CALD1-216ENST00000473714 SSU72Q9NP77 194 aaKnown RBP3.42□□□□□ -1.86
CALD1-216ENST00000473714 RTEL1Q9NZ71 1219 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 PARP2Q9UGN5 583 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 POLIQ9UNA4 740 aa3.42□□□□□ -1.86
CALD1-216ENST00000473714 XRN1Q8IZH2 1706 aaKnown RBP3.41□□□□□ -1.86
CALD1-216ENST00000473714 PXDNLA1KZ92 1463 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 MTUS2Q5JR59 1369 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 ADAMTS7Q9UKP4 1686 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 PNMA6FA0A0J9YX94 578 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 IGF2BP3O00425 579 aaKnown RBP eCLIP3.41□□□□□ -1.86
CALD1-216ENST00000473714 TREHO43280 583 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 SRFP11831 508 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 LIG1P18858 919 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 MZF1P28698 734 aaPredicted RBP3.41□□□□□ -1.86
CALD1-216ENST00000473714 GRIA4P48058 902 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 HNRNPUQ00839 825 aaKnown RBP eCLIP3.41□□□□□ -1.86
CALD1-216ENST00000473714 ID3Q02535 119 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 SPRED3Q2MJR0 410 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 TCERG1LQ5VWI1 586 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 ALG1LQ6GMV1 187 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 SPACA3Q8IXA5 215 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 MARCH10Q8NA82 808 aaPredicted RBP3.41□□□□□ -1.86
CALD1-216ENST00000473714 ABHD4Q8TB40 342 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 PMFBP1Q8TBY8 1022 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 RNF34Q969K3 372 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 DISC1Q9NRI5 854 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 IGSF5Q9NSI5 407 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 ZFYVE9O95405 1425 aa3.41□□□□□ -1.86
CALD1-216ENST00000473714 SPATA31A3Q5VYP0 1347 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms