RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 ARHGEF10LQ9HCE6 1279 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 TXNRD2Q9NNW7 524 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 TPCN1Q9ULQ1 816 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 GREB1LQ9C091 1923 aaPredicted RBP10.62□□□□□ -0.71
SMG5-203ENST00000473643 CCDC69A6NI79 296 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 DDAH1O94760 285 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 CALM1P0DP23 149 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 CALM2P0DP24 149 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 CALM3P0DP25 149 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 VCAM1P19320 739 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 EN2P19622 333 aaPredicted RBP10.62□□□□□ -0.71
SMG5-203ENST00000473643 PDIA3P30101 505 aaKnown RBP10.62□□□□□ -0.71
SMG5-203ENST00000473643 APOBRQ0VD83 1088 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 APOA5Q6Q788 366 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 LBX2Q6XYB7 198 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 CATIPQ7Z7H3 387 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 CLEC10AQ8IUN9 316 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 ZNF654Q8IZM8 581 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 SLAIN1Q8ND83 568 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 PNMA1Q8ND90 353 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 GMCL1P1Q8NEA9 526 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 GTF3C2Q8WUA4 911 aaPredicted RBP10.62□□□□□ -0.71
SMG5-203ENST00000473643 COA7Q96BR5 231 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 FEZ1Q99689 392 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 SH2D4AQ9H788 454 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 SLC12A7Q9Y666 1083 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 PDE4DIPQ5VU43 2346 aa10.62□□□□□ -0.71
SMG5-203ENST00000473643 KLF18A0A0U1RQI7 1052 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 F5H6K3 240 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 ADCY3O60266 1144 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 PEX10O60683 326 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 PFKFB2O60825 505 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 KLRC3Q07444 240 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 MTFR1Q15390 333 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 ZYXQ15942 572 aaKnown RBP10.61□□□□□ -0.71
SMG5-203ENST00000473643 ME3Q16798 604 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 SYNE3Q6ZMZ3 975 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 NFXL1Q6ZNB6 911 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 TMX3Q96JJ7 454 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 VCPKMTQ9H867 229 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 SH2B1Q9NRF2 756 aaPredicted RBP10.61□□□□□ -0.71
SMG5-203ENST00000473643 HOXC10Q9NYD6 342 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 RABGAP1Q9Y3P9 1069 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 LOC285556D6RIA3 1793 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 NID2Q14112 1375 aa10.61□□□□□ -0.71
SMG5-203ENST00000473643 K7ELQ4 463 aaPredicted RBP10.6□□□□□ -0.71
SMG5-203ENST00000473643 ZBTB43O43298 467 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 CNMDO75829 334 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 PDHBP11177 359 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 ERVK-9P63128 1117 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 ERVK-24P63145 666 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 ATP2B2Q01814 1243 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 CUL4AQ13619 759 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 COG2Q14746 738 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 KIAA1755Q5JYT7 1200 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 LRRC47Q8N1G4 583 aaKnown RBP10.6□□□□□ -0.71
SMG5-203ENST00000473643 FANCBQ8NB91 859 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 DCAF4Q8WV16 495 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 LPAR1Q92633 364 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 CHMP4CQ96CF2 233 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 GMCL1Q96IK5 515 aa10.6□□□□□ -0.71
SMG5-203ENST00000473643 LARP6Q9BRS8 491 aaKnown RBP10.6□□□□□ -0.71
SMG5-203ENST00000473643 RPAP3Q9H6T3 665 aaPredicted RBP10.6□□□□□ -0.71
SMG5-203ENST00000473643 FAM217BQ9NTX9 383 aaPredicted RBP10.6□□□□□ -0.71
SMG5-203ENST00000473643 ZSWIM8A7E2V4 1837 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 ATAD5Q96QE3 1844 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 CCDC196A0A1B0GTZ2 297 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 PALM3A6NDB9 673 aaPredicted RBP10.59□□□□□ -0.71
SMG5-203ENST00000473643 GOLGA8BA8MQT2 603 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 PLA2G6O60733 806 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 SLC34A2O95436 690 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 NDUFB10O96000 172 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 MYCP01106 439 aaPredicted RBP10.59□□□□□ -0.71
SMG5-203ENST00000473643 GJB1P08034 283 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 XRCC5P13010 732 aaKnown RBP10.59□□□□□ -0.71
SMG5-203ENST00000473643 CCL5P13501 91 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 ELNP15502 786 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 SMARCA1P28370 1054 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 MAPK4P31152 587 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 UBXN2AP68543 259 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 GRM4Q14833 912 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 SLFN13Q68D06 897 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 HSCBQ8IWL3 235 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 USP6NLQ92738 828 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 GTF3C6Q969F1 213 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 PORCNQ9H237 461 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 SLKQ9H2G2 1235 aaPredicted RBP10.59□□□□□ -0.71
SMG5-203ENST00000473643 GOPCQ9HD26 462 aa10.59□□□□□ -0.71
SMG5-203ENST00000473643 RBM28Q9NW13 759 aaKnown RBP10.59□□□□□ -0.71
SMG5-203ENST00000473643 BIN2Q9UBW5 565 aaPredicted RBP10.59□□□□□ -0.71
SMG5-203ENST00000473643 SPDYE16A6NNV3 312 aaPredicted RBP10.58□□□□□ -0.72
SMG5-203ENST00000473643 DHX16O60231 1041 aaKnown RBP10.58□□□□□ -0.72
SMG5-203ENST00000473643 LARGE1O95461 756 aa10.58□□□□□ -0.72
SMG5-203ENST00000473643 INHAP05111 366 aa10.58□□□□□ -0.72
SMG5-203ENST00000473643 PARP1P09874 1014 aaKnown RBP10.58□□□□□ -0.72
SMG5-203ENST00000473643 CDC27P30260 824 aa10.58□□□□□ -0.72
SMG5-203ENST00000473643 KIF5BP33176 963 aa10.58□□□□□ -0.72
SMG5-203ENST00000473643 ANP32AP39687 249 aaKnown RBP10.58□□□□□ -0.72
SMG5-203ENST00000473643 GJA8P48165 433 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms