RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 AKR1A1P14550 325 aa15.21■□□□□ 0.03
TRAF4-209ENST00000473421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRAF4-209ENST00000473421 PPM1EQ8WY54 764 aa15.21■□□□□ 0.03
TRAF4-209ENST00000473421 PUS7LQ9H0K6 701 aaKnown RBP15.21■□□□□ 0.03
TRAF4-209ENST00000473421 STARD7Q9NQZ5 370 aa15.21■□□□□ 0.03
TRAF4-209ENST00000473421 ATP8A2Q9NTI2 1148 aa15.21■□□□□ 0.03
TRAF4-209ENST00000473421 PAG1Q9NWQ8 432 aa15.21■□□□□ 0.03
TRAF4-209ENST00000473421 DDX49Q9Y6V7 483 aaKnown RBP15.21■□□□□ 0.03
TRAF4-209ENST00000473421 GREB1LQ9C091 1923 aaPredicted RBP15.21■□□□□ 0.02
TRAF4-209ENST00000473421 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-209ENST00000473421 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-209ENST00000473421 CTAGE5O15320 804 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 TIMP1P01033 207 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 CSF2RAP15509 400 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 SLC4A3P48751 1232 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 CDK7P50613 346 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 ADGRE1Q14246 886 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 TMEM240Q5SV17 173 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 CLASRPQ8N2M8 674 aaKnown RBP15.2■□□□□ 0.02
TRAF4-209ENST00000473421 TIFAQ96CG3 184 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 CCDC17Q96LX7 622 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 TOX2Q96NM4 488 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 PBX4Q9BYU1 374 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 KANSL2Q9H9L4 492 aa15.2■□□□□ 0.02
TRAF4-209ENST00000473421 ZHX1Q9UKY1 873 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-209ENST00000473421 ZBED9Q6R2W3 1325 aa15.19■□□□□ 0.02
TRAF4-209ENST00000473421 TMEM265A0A087WTH1 108 aa15.19■□□□□ 0.02
TRAF4-209ENST00000473421 IFIT2P09913 472 aaKnown RBP15.19■□□□□ 0.02
TRAF4-209ENST00000473421 RASIP1Q5U651 963 aa15.19■□□□□ 0.02
TRAF4-209ENST00000473421 SNRNP48Q6IEG0 339 aaKnown RBP15.19■□□□□ 0.02
TRAF4-209ENST00000473421 TSEN34Q9BSV6 310 aaKnown RBP15.19■□□□□ 0.02
TRAF4-209ENST00000473421 PRDM12Q9H4Q4 367 aa15.19■□□□□ 0.02
TRAF4-209ENST00000473421 SH2D4AQ9H788 454 aa15.19■□□□□ 0.02
TRAF4-209ENST00000473421 CXXC1Q9P0U4 656 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-209ENST00000473421 CNPY2Q9Y2B0 182 aa15.19■□□□□ 0.02
TRAF4-209ENST00000473421 SLC4A4Q9Y6R1 1079 aa15.19■□□□□ 0.02
TRAF4-209ENST00000473421 DCDC2CA8MYV0 355 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 NDUFB10O96000 172 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 ASGR1P07306 291 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 RASA1P20936 1047 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 MFSD5Q6N075 450 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 MAMDC4Q6UXC1 1216 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 CPXCR1Q8N123 301 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 KIF1BPQ96EK5 621 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 HAUS7Q99871 368 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 SLF1Q9BQI6 1058 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 PPP1R12CQ9BZL4 782 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 RAVER2Q9HCJ3 691 aaKnown RBP15.18■□□□□ 0.02
TRAF4-209ENST00000473421 FAM184BQ9ULE4 1060 aa15.18■□□□□ 0.02
TRAF4-209ENST00000473421 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 F5H6K3 240 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 RBAK-RBAKDNI3L0D1 243 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 DUSP11O75319 330 aaKnown RBP15.17■□□□□ 0.02
TRAF4-209ENST00000473421 C6orf222P0C671 652 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-209ENST00000473421 ATP5JP18859 108 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 CYP2C18P33260 490 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 KLRC3Q07444 240 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 ACVR2BQ13705 512 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 CCDC85BQ15834 202 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-209ENST00000473421 CCDC144BQ3MJ40 725 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 TJAP1Q5JTD0 557 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 TMEM63BQ5T3F8 832 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 TEX13BQ9BXU2 312 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 KATNBL1Q9H079 304 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 GOPCQ9HD26 462 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-209ENST00000473421 ASTN1O14525 1302 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 SYNGAP1Q96PV0 1343 aa15.17■□□□□ 0.02
TRAF4-209ENST00000473421 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-209ENST00000473421 MOXD2PA6NHM9 499 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 GSG1L2A8MUP6 293 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 SMARCA5O60264 1052 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-209ENST00000473421 COL9A1P20849 921 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 BEX3Q00994 111 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 CNTN2Q02246 1040 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 UBE3CQ15386 1083 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 HSP90AB4PQ58FF6 505 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 FAM126BQ8IXS8 530 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 NUP133Q8WUM0 1156 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 VWCEQ96DN2 955 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 DDX11Q96FC9 970 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 STRBPQ96SI9 672 aaKnown RBP15.16■□□□□ 0.02
TRAF4-209ENST00000473421 YBX2Q9Y2T7 364 aaKnown RBP15.16■□□□□ 0.02
TRAF4-209ENST00000473421 GBF1Q92538 1859 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 XIRP2A4UGR9 3374 aa15.16■□□□□ 0.02
TRAF4-209ENST00000473421 MYH7P12883 1935 aa15.15■□□□□ 0.02
TRAF4-209ENST00000473421 IGKV6D-41A0A0C4DH26 115 aa15.15■□□□□ 0.02
TRAF4-209ENST00000473421 ARVCFO00192 962 aa15.15■□□□□ 0.02
TRAF4-209ENST00000473421 TNFRSF10AO00220 468 aa15.15■□□□□ 0.02
TRAF4-209ENST00000473421 CST5P28325 142 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-209ENST00000473421 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRAF4-209ENST00000473421 SYMPKQ92797 1274 aaKnown RBP15.15■□□□□ 0.02
TRAF4-209ENST00000473421 UPF3AQ9H1J1 476 aaKnown RBP15.15■□□□□ 0.02
TRAF4-209ENST00000473421 ZBTB40Q9NUA8 1239 aa15.15■□□□□ 0.02
TRAF4-209ENST00000473421 CLIP2Q9UDT6 1046 aa15.15■□□□□ 0.02
TRAF4-209ENST00000473421 COG6Q9Y2V7 657 aa15.15■□□□□ 0.02
TRAF4-209ENST00000473421 GRIN2DO15399 1336 aa15.15■□□□□ 0.02
TRAF4-209ENST00000473421 ELP1O95163 1332 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms