RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 NUDT12Q9BQG2 462 aa16.64■□□□□ 0.25
BRCA1-211ENST00000472490 TEX13BQ9BXU2 312 aa16.64■□□□□ 0.25
BRCA1-211ENST00000472490 HPS5Q9UPZ3 1129 aa16.64■□□□□ 0.25
BRCA1-211ENST00000472490 ATP2A1O14983 1001 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 SNHG28P0DPA3 235 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 STAT3P40763 770 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 FLT3LGP49771 235 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 OAZ1P54368 228 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 IRF5Q13568 498 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 SLC9C1Q4G0N8 1177 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 TMEM67Q5HYA8 995 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 GPR142Q7Z601 462 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 MB21D2Q8IYB1 491 aaPredicted RBP16.63■□□□□ 0.25
BRCA1-211ENST00000472490 NEK1Q96PY6 1258 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 MOV10L1Q9BXT6 1211 aaKnown RBP16.63■□□□□ 0.25
BRCA1-211ENST00000472490 PORCNQ9H237 461 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 SLC38A10Q9HBR0 1119 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 PTCH2Q9Y6C5 1203 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 TAF6LQ9Y6J9 622 aa16.63■□□□□ 0.25
BRCA1-211ENST00000472490 PEX10O60683 326 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 HSPA4P34932 840 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 ZNF543Q08ER8 600 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 SEC23AQ15436 765 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 ASPRV1Q53RT3 343 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 NCAPG2Q86XI2 1143 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 SLAIN1Q8ND83 568 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 PXYLP1Q8TE99 480 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 CHMP4CQ96CF2 233 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 PNMA2Q9UL42 364 aa16.62■□□□□ 0.25
BRCA1-211ENST00000472490 ZNF214Q9UL59 606 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-211ENST00000472490 SLC15A5A6NIM6 579 aa16.61■□□□□ 0.25
BRCA1-211ENST00000472490 PRC1O43663 620 aa16.61■□□□□ 0.25
BRCA1-211ENST00000472490 PARP1P09874 1014 aaKnown RBP16.61■□□□□ 0.25
BRCA1-211ENST00000472490 XRCC5P13010 732 aaKnown RBP16.61■□□□□ 0.25
BRCA1-211ENST00000472490 ERCC3P19447 782 aa16.61■□□□□ 0.25
BRCA1-211ENST00000472490 BTNL9Q6UXG8 535 aa16.61■□□□□ 0.25
BRCA1-211ENST00000472490 CHST3Q7LGC8 479 aa16.61■□□□□ 0.25
BRCA1-211ENST00000472490 CATIPQ7Z7H3 387 aa16.61■□□□□ 0.25
BRCA1-211ENST00000472490 TRMT44Q8IYL2 757 aaKnown RBP16.61■□□□□ 0.25
BRCA1-211ENST00000472490 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
BRCA1-211ENST00000472490 GABRQQ9UN88 632 aa16.61■□□□□ 0.25
BRCA1-211ENST00000472490 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
BRCA1-211ENST00000472490 WDR19Q8NEZ3 1342 aa16.61■□□□□ 0.25
BRCA1-211ENST00000472490 FCER1AP12319 257 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 PTPREP23469 700 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 GRK4P32298 578 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 RGS2P41220 211 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 SYDE2Q5VT97 1194 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 SNRNP48Q6IEG0 339 aaKnown RBP16.6■□□□□ 0.25
BRCA1-211ENST00000472490 ABRAQ8N0Z2 381 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 CPXCR1Q8N123 301 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 REPS2Q8NFH8 660 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 KCNB2Q92953 911 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 GPCPD1Q9NPB8 672 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 GJD2Q9UKL4 321 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 PRR12Q9ULL5 1215 aa16.6■□□□□ 0.25
BRCA1-211ENST00000472490 CCDC85CA6NKD9 419 aa16.59■□□□□ 0.25
BRCA1-211ENST00000472490 ADCY3O60266 1144 aa16.59■□□□□ 0.25
BRCA1-211ENST00000472490 PSMA5P28066 241 aa16.59■□□□□ 0.25
BRCA1-211ENST00000472490 LIFRP42702 1097 aa16.59■□□□□ 0.25
BRCA1-211ENST00000472490 ANTXR2P58335 489 aa16.59■□□□□ 0.25
BRCA1-211ENST00000472490 UBXN2AP68543 259 aa16.59■□□□□ 0.25
BRCA1-211ENST00000472490 MAP2K5Q13163 448 aa16.59■□□□□ 0.25
BRCA1-211ENST00000472490 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
BRCA1-211ENST00000472490 DHX32Q7L7V1 743 aaKnown RBP16.59■□□□□ 0.25
BRCA1-211ENST00000472490 ARMC5Q96C12 935 aa16.59■□□□□ 0.25
BRCA1-211ENST00000472490 BIN2Q9UBW5 565 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-211ENST00000472490 FBXO40Q9UH90 709 aa16.59■□□□□ 0.25
BRCA1-211ENST00000472490 CCDC69A6NI79 296 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 SLC16A2P36021 539 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 GRB14Q14449 540 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 KCTD2Q14681 263 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 TKFCQ3LXA3 575 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 MORN1Q5T089 497 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 TTBK2Q6IQ55 1244 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 SYNE3Q6ZMZ3 975 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 RASGRP2Q7LDG7 609 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 DPP9Q86TI2 863 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 RASEFQ8IZ41 740 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 CHST13Q8NET6 341 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 MAP3K14Q99558 947 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 APBA2Q99767 749 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 USP26Q9BXU7 913 aa16.58■□□□□ 0.24
BRCA1-211ENST00000472490 RANBP17Q9H2T7 1088 aaKnown RBP16.58■□□□□ 0.24
BRCA1-211ENST00000472490 RAVER2Q9HCJ3 691 aaKnown RBP16.58■□□□□ 0.24
BRCA1-211ENST00000472490 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 DDAH1O94760 285 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 GOLGA8HP0CJ92 632 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 CALM1P0DP23 149 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 CALM2P0DP24 149 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 CALM3P0DP25 149 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 CYP2B6P20813 491 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 SLC4A3P48751 1232 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 FGD1P98174 961 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 BLOC1S2Q6QNY1 142 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 MMP19Q99542 508 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 LY9Q9HBG7 655 aa16.57■□□□□ 0.24
BRCA1-211ENST00000472490 SNX14Q9Y5W7 946 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms