RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 A0A1W2PQD8 194 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 A0A1W2PRG0 241 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 PHF20L1A8MW92 1017 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 M0R2N6 131 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 ATXN8OSP0DMR3 200 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 VEGFAP15692 232 aaPredicted RBP10.77□□□□□ -0.69
VPS52-216ENST00000471309 LMOD1P29536 600 aaPredicted RBP10.77□□□□□ -0.69
VPS52-216ENST00000471309 TRAPPC10P48553 1259 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 TOB1P50616 345 aaPredicted RBP10.77□□□□□ -0.69
VPS52-216ENST00000471309 NAPAP54920 295 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 C9orf131Q5VYM1 1079 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 DCAF15Q66K64 600 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 ADALQ6DHV7 355 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 MIGA2Q7L4E1 593 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 HOMER1Q86YM7 354 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 ADGRF4Q8IZF3 695 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 BLIDQ8IZY5 108 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 UBA5Q9GZZ9 404 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 ZMYND12Q9H0C1 365 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 JMJD4Q9H9V9 463 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 GOPCQ9HD26 462 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.77□□□□□ -0.69
VPS52-216ENST00000471309 ADARB2Q9NS39 739 aaKnown RBP10.77□□□□□ -0.69
VPS52-216ENST00000471309 GGA3Q9NZ52 723 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 CEP131Q9UPN4 1083 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 SSC5DA1L4H1 1573 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 FSD2A1L4K1 749 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 ZBTB5O15062 677 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 CTNND1O60716 968 aaKnown RBP10.76□□□□□ -0.69
VPS52-216ENST00000471309 DDNO94850 711 aaPredicted RBP10.76□□□□□ -0.69
VPS52-216ENST00000471309 LETM1O95202 739 aaPredicted RBP10.76□□□□□ -0.69
VPS52-216ENST00000471309 BMP15O95972 392 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 BMP3P12645 472 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 LIG1P18858 919 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 GNA11P29992 359 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 EPS15P42566 896 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 TTBK2Q6IQ55 1244 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 KCTD1Q719H9 257 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 MRPS27Q92552 414 aaKnown RBP10.76□□□□□ -0.69
VPS52-216ENST00000471309 L3MBTL3Q96JM7 780 aaPredicted RBP10.76□□□□□ -0.69
VPS52-216ENST00000471309 C6orf50Q9HD87 102 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 DDX19AQ9NUU7 478 aaKnown RBP10.76□□□□□ -0.69
VPS52-216ENST00000471309 PCDHA7Q9UN72 937 aa10.76□□□□□ -0.69
VPS52-216ENST00000471309 SCN4AP35499 1836 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 SYCE3A1L190 88 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 FAM205CA6NFA0 338 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 TRIM75PA6NK02 468 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 CUTAO60888 179 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 ECE1P42892 770 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 HIRAP54198 1017 aaPredicted RBP10.75□□□□□ -0.69
VPS52-216ENST00000471309 FAM160A1Q05DH4 1040 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 EARS2Q5JPH6 523 aaKnown RBP10.75□□□□□ -0.69
VPS52-216ENST00000471309 AXDND1Q5T1B0 1012 aaPredicted RBP10.75□□□□□ -0.69
VPS52-216ENST00000471309 NBPF12Q5TAG4 269 aaPredicted RBP10.75□□□□□ -0.69
VPS52-216ENST00000471309 BTNL9Q6UXG8 535 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 CCDC73Q6ZRK6 1079 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 CCAR1Q8IX12 1150 aaKnown RBP10.75□□□□□ -0.69
VPS52-216ENST00000471309 ZNF341Q9BYN7 854 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 NUP62CLQ9H1M0 184 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 VCPKMTQ9H867 229 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 VAT1LQ9HCJ6 419 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 DACT1Q9NYF0 836 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 ZNF112Q9UJU3 913 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 SCAF8Q9UPN6 1271 aaKnown RBP10.75□□□□□ -0.69
VPS52-216ENST00000471309 PCDHB6Q9Y5E3 794 aa10.75□□□□□ -0.69
VPS52-216ENST00000471309 CCDC194A0A1B0GVG4 234 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 GOLGA6L3A6NEY3 463 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 SMCO2A6NFE2 343 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 USP17L10C9JJH3 530 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 RAD21O60216 631 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 GRIN3BO60391 1043 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 PPP1R11O60927 126 aaPredicted RBP10.74□□□□□ -0.69
VPS52-216ENST00000471309 SLC16A2P36021 539 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 CDC37Q16543 378 aaPredicted RBP10.74□□□□□ -0.69
VPS52-216ENST00000471309 QRICH1Q2TAL8 776 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 TTC38Q5R3I4 469 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 SYDE2Q5VT97 1194 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 LRSAM1Q6UWE0 723 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 PIK3AP1Q6ZUJ8 805 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 KRT25Q7Z3Z0 450 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 FSIP1Q8NA03 581 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 ACER1Q8TDN7 264 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 NUP88Q99567 741 aaPredicted RBP10.74□□□□□ -0.69
VPS52-216ENST00000471309 GOLPH3LQ9H4A5 285 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 CLSTN2Q9H4D0 955 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 PCDHA6Q9UN73 950 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 PCDHA8Q9Y5H6 950 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 WDR90Q96KV7 1748 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 OTOFQ9HC10 1997 aa10.74□□□□□ -0.69
VPS52-216ENST00000471309 BAZ2BQ9UIF8 2168 aaKnown RBP10.73□□□□□ -0.69
VPS52-216ENST00000471309 PHIPQ8WWQ0 1821 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 FAM237AA0A1B0GTK4 181 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 ADAMTS3O15072 1205 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 PLA2G6O60733 806 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 NR1I2O75469 434 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 PTPREP23469 700 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 CMA1P23946 247 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 ADCY7P51828 1080 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 STAT2P52630 851 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 GPR162Q16538 588 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms