RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 TICAM2Q86XR7 235 aa3.4□□□□□ -1.86
CCNL1-214ENST00000471247 SMG8Q8ND04 991 aaKnown RBP3.4□□□□□ -1.86
CCNL1-214ENST00000471247 EAF1Q96JC9 268 aaPredicted RBP3.4□□□□□ -1.86
CCNL1-214ENST00000471247 BRINP2Q9C0B6 783 aa3.4□□□□□ -1.86
CCNL1-214ENST00000471247 CCDC113Q9H0I3 377 aa3.4□□□□□ -1.86
CCNL1-214ENST00000471247 CLEC4MQ9H2X3 399 aaPredicted RBP3.4□□□□□ -1.86
CCNL1-214ENST00000471247 GJA3Q9Y6H8 435 aa3.4□□□□□ -1.86
CCNL1-214ENST00000471247 ERBB4Q15303 1308 aa3.4□□□□□ -1.86
CCNL1-214ENST00000471247 SIP14410 1827 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 CDC14CA4D256 554 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 H0YHG0 523 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 KLF4O43474 513 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 SMNDC1O75940 238 aaKnown RBP eCLIP3.4□□□□□ -1.872e-16■□□□□ 9.6
CCNL1-214ENST00000471247 ATF4P18848 351 aaPredicted RBP3.4□□□□□ -1.87
CCNL1-214ENST00000471247 TFE3P19532 575 aaPredicted RBP3.4□□□□□ -1.87
CCNL1-214ENST00000471247 SLC16A10Q8TF71 515 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 GATAD2BQ8WXI9 593 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 TRIM56Q9BRZ2 755 aaKnown RBP3.4□□□□□ -1.87
CCNL1-214ENST00000471247 RASSF4Q9H2L5 321 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 USP20Q9Y2K6 914 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 SAMM50Q9Y512 469 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 MEGF6O75095 1541 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 TNS3Q68CZ2 1445 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 MYH1P12882 1939 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 IGSF1Q8N6C5 1336 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 A6NHS1 94 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 LETM1O95202 739 aaPredicted RBP3.4□□□□□ -1.87
CCNL1-214ENST00000471247 CELA2BP08218 269 aaPredicted RBP3.4□□□□□ -1.87
CCNL1-214ENST00000471247 SUZ12Q15022 739 aaKnown RBP3.4□□□□□ -1.87
CCNL1-214ENST00000471247 CT47A1Q5JQC4 288 aaPredicted RBP3.4□□□□□ -1.87
CCNL1-214ENST00000471247 NXPE4Q6UWF7 544 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 MCF2L2Q86YR7 1114 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 TMEM87AQ8NBN3 555 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 GBP4Q96PP9 640 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 TMPRSS13Q9BYE2 586 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 CENPHQ9H3R5 247 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 KIF3AQ9Y496 699 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 LCTP09848 1927 aa3.4□□□□□ -1.87
CCNL1-214ENST00000471247 SETQ01105 290 aaPredicted RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 PCDH1Q08174 1060 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 SLFN5Q08AF3 891 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 NAALADL2Q58DX5 795 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 RNFT1Q5M7Z0 435 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 HP1BP3Q5SSJ5 553 aaPredicted RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 PCNX4Q63HM2 1172 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 MSL1Q68DK7 614 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 ZSCAN30Q86W11 494 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 LATS2Q9NRM7 1088 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 TMEM39AQ9NV64 488 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 RLFQ13129 1914 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 U2AF2P26368 475 aaKnown RBP eCLIP3.39□□□□□ -1.871e-17■■■□□ 16.4
CCNL1-214ENST00000471247 SSR1P43307 286 aaKnown RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 MAPK8P45983 427 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 AFF1P51825 1210 aaKnown RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 MNAT1P51948 309 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 BIRC2Q13490 618 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 TSNAXIP1Q2TAA8 658 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 GORABQ5T7V8 394 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 PI16Q6UXB8 463 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 ARMCX6Q7L4S7 300 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 ZNF513Q8N8E2 541 aaPredicted RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 JARID2Q92833 1246 aaPredicted RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 ZNF622Q969S3 477 aaKnown RBP eCLIP3.39□□□□□ -1.879e-10■■■□□ 16.6
CCNL1-214ENST00000471247 TMEM51Q9NW97 253 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 VTI1BQ9UEU0 232 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 ADAMTSL1Q8N6G6 1762 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 GPR25O00155 361 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 PIK3R2O00459 728 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 TNFRSF10CO14798 259 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 IMPDH2P12268 514 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 BMP4P12644 408 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 CDC27P30260 824 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 CCNFP41002 786 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 NAP1L1P55209 391 aaKnown RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 SARNPP82979 210 aaKnown RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 SAFB2Q14151 953 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 DHX8Q14562 1220 aaKnown RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 TESK1Q15569 626 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 MFSD4BQ5TF39 518 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 ANKLE2Q86XL3 938 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 DDX54Q8TDD1 881 aaKnown RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 VWCEQ96DN2 955 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 COL25A1Q9BXS0 654 aaPredicted RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 STK26Q9P289 416 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 V9GYY5 206 aaPredicted RBP3.39□□□□□ -1.87
CCNL1-214ENST00000471247 NAV1Q8NEY1 1877 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 CENPFP49454 3210 aa3.39□□□□□ -1.87
CCNL1-214ENST00000471247 TIAF1O95411 115 aa3.38□□□□□ -1.87
CCNL1-214ENST00000471247 MX2P20592 715 aa3.38□□□□□ -1.87
CCNL1-214ENST00000471247 ERCC5P28715 1186 aaPredicted RBP3.38□□□□□ -1.87
CCNL1-214ENST00000471247 RPL6Q02878 288 aaKnown RBP3.38□□□□□ -1.87
CCNL1-214ENST00000471247 SART3Q15020 963 aaKnown RBP3.38□□□□□ -1.87
CCNL1-214ENST00000471247 CAVIN1Q6NZI2 390 aaKnown RBP3.38□□□□□ -1.87
CCNL1-214ENST00000471247 CHSY3Q70JA7 882 aa3.38□□□□□ -1.87
CCNL1-214ENST00000471247 THEMISQ8N1K5 641 aaPredicted RBP3.38□□□□□ -1.87
CCNL1-214ENST00000471247 SPC24Q8NBT2 197 aa3.38□□□□□ -1.87
CCNL1-214ENST00000471247 RTF1Q92541 710 aaKnown RBP3.38□□□□□ -1.87
CCNL1-214ENST00000471247 CWC22Q9HCG8 908 aaKnown RBP3.38□□□□□ -1.87
CCNL1-214ENST00000471247 IFT57Q9NWB7 429 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms