RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 ADCY4Q8NFM4 1077 aa8.68□□□□□ -1.02
SSB-209ENST00000470621 DHX38Q92620 1227 aaKnown RBP8.68□□□□□ -1.02
SSB-209ENST00000470621 ALPK1Q96QP1 1244 aa8.68□□□□□ -1.02
SSB-209ENST00000470621 DSCC1Q9BVC3 393 aa8.68□□□□□ -1.02
SSB-209ENST00000470621 KRTAP4-7Q9BYR0 210 aa8.68□□□□□ -1.02
SSB-209ENST00000470621 H0Y8X5 98 aa8.67□□□□□ -1.02
SSB-209ENST00000470621 FKTNO75072 461 aa8.67□□□□□ -1.02
SSB-209ENST00000470621 SYPP08247 313 aa8.67□□□□□ -1.02
SSB-209ENST00000470621 ATP2B1P20020 1258 aa8.67□□□□□ -1.02
SSB-209ENST00000470621 HEATR6Q6AI08 1181 aaKnown RBP8.67□□□□□ -1.02
SSB-209ENST00000470621 ZPBP2Q6X784 338 aa8.67□□□□□ -1.02
SSB-209ENST00000470621 FAM178BQ8IXR5 827 aa8.67□□□□□ -1.02
SSB-209ENST00000470621 NOL6Q9H6R4 1146 aaKnown RBP8.67□□□□□ -1.02
SSB-209ENST00000470621 ST7Q9NRC1 585 aa8.67□□□□□ -1.02
SSB-209ENST00000470621 APEX2Q9UBZ4 518 aa8.67□□□□□ -1.02
SSB-209ENST00000470621 TCFL5Q9UL49 500 aa8.67□□□□□ -1.02
SSB-209ENST00000470621 STK10O94804 968 aaKnown RBP8.66□□□□□ -1.02
SSB-209ENST00000470621 ITGA4P13612 1032 aa8.66□□□□□ -1.02
SSB-209ENST00000470621 GTF2F1P35269 517 aaKnown RBP eCLIP8.66□□□□□ -1.02
SSB-209ENST00000470621 FIBCD1Q8N539 461 aa8.66□□□□□ -1.02
SSB-209ENST00000470621 ZNF513Q8N8E2 541 aaPredicted RBP8.66□□□□□ -1.02
SSB-209ENST00000470621 LGR4Q9BXB1 951 aa8.66□□□□□ -1.02
SSB-209ENST00000470621 ADAMTS10Q9H324 1103 aa8.66□□□□□ -1.02
SSB-209ENST00000470621 PRR13Q9NZ81 148 aa8.66□□□□□ -1.02
SSB-209ENST00000470621 EBF1Q9UH73 591 aa8.66□□□□□ -1.02
SSB-209ENST00000470621 FHOD1Q9Y613 1164 aa8.66□□□□□ -1.02
SSB-209ENST00000470621 TMEM82A0PJX8 343 aa8.65□□□□□ -1.02
SSB-209ENST00000470621 DDAH1O94760 285 aa8.65□□□□□ -1.02
SSB-209ENST00000470621 GJB6O95452 261 aa8.65□□□□□ -1.02
SSB-209ENST00000470621 NOL9Q5SY16 702 aaKnown RBP8.65□□□□□ -1.02
SSB-209ENST00000470621 TMEM59LQ9UK28 342 aa8.65□□□□□ -1.02
SSB-209ENST00000470621 HK2P52789 917 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 PCBP3P57721 371 aaKnown RBP8.64□□□□□ -1.03
SSB-209ENST00000470621 ERVFC1P60507 584 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 PPP2R5DQ14738 602 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 TCEAL1Q15170 157 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 FXNQ16595 210 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 OGFOD2Q6N063 350 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 ADAT2Q7Z6V5 191 aaKnown RBP8.64□□□□□ -1.03
SSB-209ENST00000470621 LINC00116Q8NCU8 138 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 ZDHHC15Q96MV8 337 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 WHRNQ9P202 907 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 CTNND2Q9UQB3 1225 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 ZNF281Q9Y2X9 895 aa8.64□□□□□ -1.03
SSB-209ENST00000470621 ZGLP1P0C6A0 271 aa8.63□□□□□ -1.03
SSB-209ENST00000470621 JAG1P78504 1218 aa8.63□□□□□ -1.03
SSB-209ENST00000470621 NCAPHQ15003 741 aa8.63□□□□□ -1.03
SSB-209ENST00000470621 DDR2Q16832 855 aa8.63□□□□□ -1.03
SSB-209ENST00000470621 RNF111Q6ZNA4 994 aa8.63□□□□□ -1.03
SSB-209ENST00000470621 GBP3Q9H0R5 595 aa8.63□□□□□ -1.03
SSB-209ENST00000470621 R3HCC1Q9Y3T6 440 aaKnown RBP8.63□□□□□ -1.03
SSB-209ENST00000470621 ANKRD34BA5PLL1 514 aa8.62□□□□□ -1.03
SSB-209ENST00000470621 ZNF205O95201 554 aa8.62□□□□□ -1.03
SSB-209ENST00000470621 GSNP06396 782 aa8.62□□□□□ -1.03
SSB-209ENST00000470621 RPL10P27635 214 aaKnown RBP8.62□□□□□ -1.03
SSB-209ENST00000470621 BMP8BP34820 402 aa8.62□□□□□ -1.03
SSB-209ENST00000470621 RAB33AQ14088 237 aa8.62□□□□□ -1.03
SSB-209ENST00000470621 RTP2Q5QGT7 225 aa8.62□□□□□ -1.03
SSB-209ENST00000470621 WAPLQ7Z5K2 1190 aa8.62□□□□□ -1.03
SSB-209ENST00000470621 SREK1Q8WXA9 508 aaKnown RBP8.62□□□□□ -1.03
SSB-209ENST00000470621 MCMBPQ9BTE3 642 aa8.62□□□□□ -1.03
SSB-209ENST00000470621 G6PC3Q9BUM1 346 aa8.62□□□□□ -1.03
SSB-209ENST00000470621 SLC12A9Q9BXP2 914 aa8.62□□□□□ -1.03
SSB-209ENST00000470621 CGGBP1Q9UFW8 167 aaPredicted RBP8.62□□□□□ -1.03
SSB-209ENST00000470621 SSU72P8A0A1W2PR75 194 aa8.61□□□□□ -1.03
SSB-209ENST00000470621 SUSD5O60279 629 aa8.61□□□□□ -1.03
SSB-209ENST00000470621 PAPLNO95428 1278 aa8.61□□□□□ -1.03
SSB-209ENST00000470621 VAV1P15498 845 aa8.61□□□□□ -1.03
SSB-209ENST00000470621 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
SSB-209ENST00000470621 CKAP2LQ8IYA6 745 aa8.61□□□□□ -1.03
SSB-209ENST00000470621 ASIC4Q96FT7 647 aa8.61□□□□□ -1.03
SSB-209ENST00000470621 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
SSB-209ENST00000470621 SUGT1Q9Y2Z0 365 aa8.61□□□□□ -1.03
SSB-209ENST00000470621 VAMP4O75379 141 aa8.6□□□□□ -1.03
SSB-209ENST00000470621 PPM1BO75688 479 aa8.6□□□□□ -1.03
SSB-209ENST00000470621 CD3EP07766 207 aa8.6□□□□□ -1.03
SSB-209ENST00000470621 IFNGR1P15260 489 aa8.6□□□□□ -1.03
SSB-209ENST00000470621 ITGB5P18084 799 aa8.6□□□□□ -1.03
SSB-209ENST00000470621 GDNFP39905 211 aa8.6□□□□□ -1.03
SSB-209ENST00000470621 FYB2Q5VWT5 728 aa8.6□□□□□ -1.03
SSB-209ENST00000470621 POU5F2Q8N7G0 328 aa8.6□□□□□ -1.03
SSB-209ENST00000470621 FLAD1Q8NFF5 587 aa8.6□□□□□ -1.03
SSB-209ENST00000470621 SP110Q9HB58 689 aa8.6□□□□□ -1.03
SSB-209ENST00000470621 PPP1R1BQ9UD71 204 aaPredicted RBP8.6□□□□□ -1.03
SSB-209ENST00000470621 A0A087WZG4 1122 aa8.59□□□□□ -1.03
SSB-209ENST00000470621 TBX1O43435 398 aa8.59□□□□□ -1.03
SSB-209ENST00000470621 USP2O75604 605 aaPredicted RBP8.59□□□□□ -1.03
SSB-209ENST00000470621 TRHRP34981 398 aaPredicted RBP8.59□□□□□ -1.03
SSB-209ENST00000470621 CEBPAP49715 358 aaPredicted RBP8.59□□□□□ -1.03
SSB-209ENST00000470621 DPY19L1Q2PZI1 675 aa8.59□□□□□ -1.03
SSB-209ENST00000470621 TIGD5Q53EQ6 642 aa8.59□□□□□ -1.03
SSB-209ENST00000470621 CWF19L1Q69YN2 538 aaKnown RBP8.59□□□□□ -1.03
SSB-209ENST00000470621 ARHGEF39Q8N4T4 335 aa8.59□□□□□ -1.03
SSB-209ENST00000470621 LINC01599Q8WXQ3 324 aa8.59□□□□□ -1.03
SSB-209ENST00000470621 FCRL3Q96P31 734 aaPredicted RBP8.59□□□□□ -1.03
SSB-209ENST00000470621 CDADC1Q9BWV3 514 aa8.59□□□□□ -1.03
SSB-209ENST00000470621 TRIM55Q9BYV6 548 aa8.59□□□□□ -1.03
SSB-209ENST00000470621 SF3B6Q9Y3B4 125 aaKnown RBP8.59□□□□□ -1.03
SSB-209ENST00000470621 EFEMP2O95967 443 aa8.58□□□□□ -1.04
SSB-209ENST00000470621 JUNBP17275 347 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms